RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 KLK9Q9UKQ9 250 aa4.96□□□□□ -1.62
VPS13B-205ENST00000493587 SPTA1P02549 2419 aa4.96□□□□□ -1.62
VPS13B-205ENST00000493587 ANK3Q12955 4377 aaKnown RBP4.95□□□□□ -1.62
VPS13B-205ENST00000493587 NREPQ16612 68 aa4.95□□□□□ -1.62
VPS13B-205ENST00000493587 CDKN2A-AS1Q9UH64 79 aa4.95□□□□□ -1.62
VPS13B-205ENST00000493587 TACC2O95359 2948 aa4.95□□□□□ -1.62
VPS13B-205ENST00000493587 CELSR1Q9NYQ6 3014 aa4.95□□□□□ -1.62
VPS13B-205ENST00000493587 JMJD7-PLA2G4BH0Y9G9 81 aa4.95□□□□□ -1.62
VPS13B-205ENST00000493587 PRYO14603 147 aa4.95□□□□□ -1.62
VPS13B-205ENST00000493587 DEFB1P60022 68 aa4.95□□□□□ -1.62
VPS13B-205ENST00000493587 TRBV10-3A0A0K0K1G6 114 aa4.94□□□□□ -1.62
VPS13B-205ENST00000493587 NDUFA1O15239 70 aa4.94□□□□□ -1.62
VPS13B-205ENST00000493587 Q6ZTI0 123 aa4.94□□□□□ -1.62
VPS13B-205ENST00000493587 TOMM7Q9P0U1 55 aa4.94□□□□□ -1.62
VPS13B-205ENST00000493587 COL12A1Q99715 3063 aa4.94□□□□□ -1.62
VPS13B-205ENST00000493587 IGHV4OR15-8A0A075B7B6 117 aa4.94□□□□□ -1.62
VPS13B-205ENST00000493587 A0A087WW49 117 aa4.94□□□□□ -1.62
VPS13B-205ENST00000493587 SMIM11BQ8TCY0 68 aa4.94□□□□□ -1.62
VPS13B-205ENST00000493587 SND1-IT1Q9HBX3 110 aa4.94□□□□□ -1.62
VPS13B-205ENST00000493587 CHD8Q9HCK8 2581 aa4.94□□□□□ -1.62
VPS13B-205ENST00000493587 IGHV3-73A0A0B4J1V6 119 aa4.93□□□□□ -1.62
VPS13B-205ENST00000493587 CHKB-CPT1BH3BT56 60 aa4.93□□□□□ -1.62
VPS13B-205ENST00000493587 LINC00158P58513 81 aa4.93□□□□□ -1.62
VPS13B-205ENST00000493587 NANOS2P60321 138 aaKnown RBP4.93□□□□□ -1.62
VPS13B-205ENST00000493587 C11orf44Q8N8P7 122 aa4.93□□□□□ -1.62
VPS13B-205ENST00000493587 NOTCH3Q9UM47 2321 aa4.93□□□□□ -1.62
VPS13B-205ENST00000493587 ATRXP46100 2492 aa4.93□□□□□ -1.62
VPS13B-205ENST00000493587 ZNF73O43830 326 aaPredicted RBP4.93□□□□□ -1.62
VPS13B-205ENST00000493587 BCE1O60756 84 aa4.93□□□□□ -1.62
VPS13B-205ENST00000493587 CLPSL1A2RUU4 121 aa4.93□□□□□ -1.62
VPS13B-205ENST00000493587 M0R378 163 aa4.93□□□□□ -1.62
VPS13B-205ENST00000493587 PRR4Q16378 134 aa4.93□□□□□ -1.62
VPS13B-205ENST00000493587 C11orf72Q8NBR9 251 aa4.93□□□□□ -1.62
VPS13B-205ENST00000493587 PIEZO1Q92508 2521 aa4.93□□□□□ -1.62
VPS13B-205ENST00000493587 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.92□□□□□ -1.62
VPS13B-205ENST00000493587 TRBV10-1A0A0K0K1A3 114 aa4.92□□□□□ -1.62
VPS13B-205ENST00000493587 IGKV2-29A2NJV5 120 aaPredicted RBP4.92□□□□□ -1.62
VPS13B-205ENST00000493587 IBA57-AS1B1ANH7 110 aa4.92□□□□□ -1.62
VPS13B-205ENST00000493587 K7EMT4 169 aa4.92□□□□□ -1.62
VPS13B-205ENST00000493587 IGHV1-46P01743 117 aa4.92□□□□□ -1.62
VPS13B-205ENST00000493587 HTN1P15515 57 aa4.92□□□□□ -1.62
VPS13B-205ENST00000493587 CCL17Q92583 94 aa4.92□□□□□ -1.62
VPS13B-205ENST00000493587 IGHV1-3A0A0C4DH29 117 aa4.92□□□□□ -1.62
VPS13B-205ENST00000493587 A8MUN3 132 aa4.92□□□□□ -1.62
VPS13B-205ENST00000493587 LINC01547P58512 204 aaPredicted RBP4.92□□□□□ -1.62
VPS13B-205ENST00000493587 FBXL19-AS1Q494R0 122 aa4.92□□□□□ -1.62
VPS13B-205ENST00000493587 BBC3Q96PG8 261 aaPredicted RBP4.92□□□□□ -1.62
VPS13B-205ENST00000493587 CREBBPQ92793 2442 aa4.92□□□□□ -1.62
VPS13B-205ENST00000493587 LYRM9A8MSI8 78 aa4.92□□□□□ -1.62
VPS13B-205ENST00000493587 NDUFS5O43920 106 aa4.92□□□□□ -1.62
VPS13B-205ENST00000493587 RNASE3P12724 160 aaKnown RBP4.92□□□□□ -1.62
VPS13B-205ENST00000493587 GNLYP22749 145 aa4.92□□□□□ -1.62
VPS13B-205ENST00000493587 KLK9Q2XQG4 91 aa4.92□□□□□ -1.62
VPS13B-205ENST00000493587 CELSR2Q9HCU4 2923 aa4.91□□□□□ -1.62
VPS13B-205ENST00000493587 IGSF10Q6WRI0 2623 aa4.91□□□□□ -1.62
VPS13B-205ENST00000493587 C8orf87E5RJ46 101 aa4.91□□□□□ -1.62
VPS13B-205ENST00000493587 BSPH1Q075Z2 132 aa4.91□□□□□ -1.62
VPS13B-205ENST00000493587 MDFIQ99750 246 aa4.91□□□□□ -1.62
VPS13B-205ENST00000493587 CRYBG3Q68DQ2 2970 aa4.91□□□□□ -1.62
VPS13B-205ENST00000493587 BPY2O14599 106 aa4.91□□□□□ -1.62
VPS13B-205ENST00000493587 CTSGP08311 255 aa4.91□□□□□ -1.62
VPS13B-205ENST00000493587 Q6ZVQ6 151 aa4.91□□□□□ -1.62
VPS13B-205ENST00000493587 LINC00269Q8N2A0 174 aa4.91□□□□□ -1.62
VPS13B-205ENST00000493587 LINC00337Q8N6G1 96 aa4.91□□□□□ -1.62
VPS13B-205ENST00000493587 NCOR2Q9Y618 2525 aa4.9□□□□□ -1.62
VPS13B-205ENST00000493587 TRAV22A0A0B4J277 110 aa4.9□□□□□ -1.62
VPS13B-205ENST00000493587 IGKV3-20P01619 116 aa4.9□□□□□ -1.62
VPS13B-205ENST00000493587 C19orf54Q5BKX5 351 aa4.9□□□□□ -1.62
VPS13B-205ENST00000493587 MUC4Q99102 2169 aa4.9□□□□□ -1.63
VPS13B-205ENST00000493587 A8MU10 97 aa4.9□□□□□ -1.63
VPS13B-205ENST00000493587 Q6ZRP5 223 aa4.89□□□□□ -1.63
VPS13B-205ENST00000493587 HIGD2AQ9BW72 106 aa4.89□□□□□ -1.63
VPS13B-205ENST00000493587 PKD1L2Q7Z442 2459 aa4.89□□□□□ -1.63
VPS13B-205ENST00000493587 IGHV3-38A0A0C4DH36 116 aa4.89□□□□□ -1.63
VPS13B-205ENST00000493587 E7EQL1 145 aa4.89□□□□□ -1.63
VPS13B-205ENST00000493587 IGHV1-8P0DP01 117 aa4.89□□□□□ -1.63
VPS13B-205ENST00000493587 UBE2AP49459 152 aa4.89□□□□□ -1.63
VPS13B-205ENST00000493587 ZFAND2AQ8N6M9 145 aa4.89□□□□□ -1.63
VPS13B-205ENST00000493587 KAAG1Q9UBP8 84 aa4.89□□□□□ -1.63
VPS13B-205ENST00000493587 TRBV7-4A0A0J9YYF1 115 aa4.89□□□□□ -1.63
VPS13B-205ENST00000493587 TRBV6-5A0A0K0K1A5 114 aa4.89□□□□□ -1.63
VPS13B-205ENST00000493587 M0QY20 66 aa4.89□□□□□ -1.63
VPS13B-205ENST00000493587 LINC00315P59091 139 aa4.89□□□□□ -1.63
VPS13B-205ENST00000493587 FBN2P35556 2912 aa4.88□□□□□ -1.63
VPS13B-205ENST00000493587 UTP20O75691 2785 aaKnown RBP4.88□□□□□ -1.63
VPS13B-205ENST00000493587 IGKV3OR2-268A0A0C4DH90 116 aa4.88□□□□□ -1.63
VPS13B-205ENST00000493587 MED14OSP0DP75 135 aa4.88□□□□□ -1.63
VPS13B-205ENST00000493587 LINC00588Q9Y4M8 146 aa4.88□□□□□ -1.63
VPS13B-205ENST00000493587 KIF25-AS1Q9Y6Z4 181 aa4.88□□□□□ -1.63
VPS13B-205ENST00000493587 A0A1W2PPR1 153 aa4.88□□□□□ -1.63
VPS13B-205ENST00000493587 FAM19A3Q7Z5A8 133 aa4.88□□□□□ -1.63
VPS13B-205ENST00000493587 OBSCN-AS1Q96MR7 158 aa4.88□□□□□ -1.63
VPS13B-205ENST00000493587 IGLV11-55A0A075B6I3 123 aa4.88□□□□□ -1.63
VPS13B-205ENST00000493587 A6NED7 52 aa4.88□□□□□ -1.63
VPS13B-205ENST00000493587 SYCNQ0VAF6 134 aa4.88□□□□□ -1.63
VPS13B-205ENST00000493587 C11orf71Q6IPW1 123 aa4.88□□□□□ -1.63
VPS13B-205ENST00000493587 LINC01356Q8N9X3 169 aa4.88□□□□□ -1.63
VPS13B-205ENST00000493587 COX7B2Q8TF08 81 aa4.88□□□□□ -1.63
VPS13B-205ENST00000493587 LENEPQ9Y5L5 61 aa4.88□□□□□ -1.63
VPS13B-205ENST00000493587 LYPD2Q6UXB3 125 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms