RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 NDUFC1O43677 76 aa0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 SPRR1BP22528 89 aa0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 PMCHL1Q16048 86 aa0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 C10orf113Q5VZT2 155 aa0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 HEPN1Q6WQI6 88 aa0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 LINC01600Q96MT4 127 aa0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 IER3IP1Q9Y5U9 82 aa0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 SMG6Q86US8 1419 aaKnown RBP0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 DCHS2Q6V1P9 2916 aa0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 PHLPP1O60346 1717 aa0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 ARAP2Q8WZ64 1704 aa0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 FOCADQ5VW36 1801 aa0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 SPTBN1Q01082 2364 aaKnown RBP0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 SPTA1P02549 2419 aa0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 MAP1BP46821 2468 aaKnown RBP0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 M0R2T5 61 aa0□□□□□ -2.41
HMGB1P30-201ENST00000492455 CCL22O00626 93 aa0□□□□□ -2.41
HMGB1P30-201ENST00000492455 RPL38P63173 70 aaKnown RBP0□□□□□ -2.41
HMGB1P30-201ENST00000492455 Q0VG73 95 aa0□□□□□ -2.41
HMGB1P30-201ENST00000492455 SFTA2Q6UW10 78 aa0□□□□□ -2.41
HMGB1P30-201ENST00000492455 BCL9LQ86UU0 1499 aa0□□□□□ -2.41
HMGB1P30-201ENST00000492455 FAM223AQ8IWN6 122 aa0□□□□□ -2.41
HMGB1P30-201ENST00000492455 APLNQ9ULZ1 77 aa0□□□□□ -2.41
HMGB1P30-201ENST00000492455 BIVM-ERCC5R4GMW8 1640 aa0□□□□□ -2.41
HMGB1P30-201ENST00000492455 URB1O60287 2271 aaKnown RBP-0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 GAPVD1Q14C86 1478 aa-0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 CHD8Q9HCK8 2581 aa-0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 A0A0G2JND7 137 aa-0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 SPTY2D1-AS1A0A0U1RR47 76 aa-0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 A0A1B0GU69 56 aa-0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 C20orf202A1L168 122 aa-0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 OOSP1A8MZH6 123 aa-0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 PSMG4Q5JS54 123 aa-0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 DEFB123Q8N688 67 aa-0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 LINC00472Q9H8W2 130 aa-0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 LINC00846Q9NV44 126 aa-0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 ACANP16112 2415 aa-0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 ZANQ9Y493 2812 aa-0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 DOCK1Q14185 1865 aa-0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 NBEAL1Q6ZS30 2694 aa-0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 SETXQ7Z333 2677 aaKnown RBP-0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 PRDM2Q13029 1718 aa-0.01□□□□□ -2.41
HMGB1P30-201ENST00000492455 LRP6O75581 1613 aa-0.02□□□□□ -2.41
HMGB1P30-201ENST00000492455 ARHGEF12Q9NZN5 1544 aa-0.02□□□□□ -2.41
HMGB1P30-201ENST00000492455 A0A1B0GV90 55 aa-0.02□□□□□ -2.41
HMGB1P30-201ENST00000492455 C7orf77A4D0Y5 90 aa-0.02□□□□□ -2.41
HMGB1P30-201ENST00000492455 I3L2K1 104 aa-0.02□□□□□ -2.41
HMGB1P30-201ENST00000492455 UQCRHP07919 91 aa-0.02□□□□□ -2.41
HMGB1P30-201ENST00000492455 ARMS2P0C7Q2 107 aa-0.02□□□□□ -2.41
HMGB1P30-201ENST00000492455 LINC00032P0C843 101 aa-0.02□□□□□ -2.41
HMGB1P30-201ENST00000492455 SPRR2DP22532 72 aa-0.02□□□□□ -2.41
HMGB1P30-201ENST00000492455 SMIM11AP58511 58 aa-0.02□□□□□ -2.41
HMGB1P30-201ENST00000492455 ALKAL2Q6UX46 152 aa-0.02□□□□□ -2.41
HMGB1P30-201ENST00000492455 ZNF720Q7Z2F6 126 aa-0.02□□□□□ -2.41
HMGB1P30-201ENST00000492455 DPH3P1Q9H4G8 78 aa-0.02□□□□□ -2.41
HMGB1P30-201ENST00000492455 CDC42SE2Q9NRR3 84 aa-0.02□□□□□ -2.41
HMGB1P30-201ENST00000492455 LINC00474Q9P2X8 69 aa-0.02□□□□□ -2.41
HMGB1P30-201ENST00000492455 PATJQ8NI35 1801 aa-0.02□□□□□ -2.41
HMGB1P30-201ENST00000492455 CHD6Q8TD26 2715 aa-0.02□□□□□ -2.41
HMGB1P30-201ENST00000492455 A2ML1A8K2U0 1454 aa-0.03□□□□□ -2.41
HMGB1P30-201ENST00000492455 MYH7P12883 1935 aa-0.03□□□□□ -2.41
HMGB1P30-201ENST00000492455 NSD3Q9BZ95 1437 aa-0.03□□□□□ -2.41
HMGB1P30-201ENST00000492455 CSMD3Q7Z407 3707 aa-0.03□□□□□ -2.41
HMGB1P30-201ENST00000492455 CORTO00230 105 aa-0.03□□□□□ -2.41
HMGB1P30-201ENST00000492455 DLEU1O43261 78 aa-0.03□□□□□ -2.41
HMGB1P30-201ENST00000492455 DEFB135Q30KP9 77 aa-0.03□□□□□ -2.41
HMGB1P30-201ENST00000492455 KRTAP6-1Q3LI64 71 aa-0.03□□□□□ -2.41
HMGB1P30-201ENST00000492455 COL5A1-AS1Q5SY13 56 aa-0.03□□□□□ -2.41
HMGB1P30-201ENST00000492455 CDKN2A-AS1Q9UH64 79 aa-0.03□□□□□ -2.41
HMGB1P30-201ENST00000492455 MUC12Q9UKN1 5478 aa-0.03□□□□□ -2.41
HMGB1P30-201ENST00000492455 PPRC1Q5VV67 1664 aaKnown RBP-0.03□□□□□ -2.41
HMGB1P30-201ENST00000492455 ATRQ13535 2644 aa-0.03□□□□□ -2.41
HMGB1P30-201ENST00000492455 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.03□□□□□ -2.42
HMGB1P30-201ENST00000492455 ABCC5O15440 1437 aa-0.04□□□□□ -2.42
HMGB1P30-201ENST00000492455 SCAPERQ9BY12 1400 aa-0.04□□□□□ -2.42
HMGB1P30-201ENST00000492455 WNK1Q9H4A3 2382 aa-0.04□□□□□ -2.42
HMGB1P30-201ENST00000492455 FLNBO75369 2602 aaKnown RBP-0.04□□□□□ -2.42
HMGB1P30-201ENST00000492455 RAPGEF6Q8TEU7 1601 aa-0.04□□□□□ -2.42
HMGB1P30-201ENST00000492455 STAB1Q9NY15 2570 aa-0.04□□□□□ -2.42
HMGB1P30-201ENST00000492455 MYH8P13535 1937 aa-0.04□□□□□ -2.42
HMGB1P30-201ENST00000492455 UQCRHLA0A096LP55 91 aa-0.04□□□□□ -2.42
HMGB1P30-201ENST00000492455 FAM223BA6NKX1 122 aa-0.04□□□□□ -2.42
HMGB1P30-201ENST00000492455 H0Y9P7 68 aa-0.04□□□□□ -2.42
HMGB1P30-201ENST00000492455 GNGT2O14610 69 aa-0.04□□□□□ -2.42
HMGB1P30-201ENST00000492455 MPC2O95563 127 aa-0.04□□□□□ -2.42
HMGB1P30-201ENST00000492455 UBE2D3P61077 147 aa-0.04□□□□□ -2.42
HMGB1P30-201ENST00000492455 UBE2D2P62837 147 aa-0.04□□□□□ -2.42
HMGB1P30-201ENST00000492455 HMGN3Q15651 99 aa-0.04□□□□□ -2.42
HMGB1P30-201ENST00000492455 KLK9Q2XQG4 91 aa-0.04□□□□□ -2.42
HMGB1P30-201ENST00000492455 NMSQ5H8A3 153 aa-0.04□□□□□ -2.42
HMGB1P30-201ENST00000492455 C6orf201Q7Z4U5 140 aa-0.04□□□□□ -2.42
HMGB1P30-201ENST00000492455 TCEAL7Q9BRU2 100 aa-0.04□□□□□ -2.42
HMGB1P30-201ENST00000492455 CACFD1Q9UGQ2 172 aa-0.04□□□□□ -2.42
HMGB1P30-201ENST00000492455 WNK3Q9BYP7 1800 aa-0.04□□□□□ -2.42
HMGB1P30-201ENST00000492455 CREBBPQ92793 2442 aa-0.04□□□□□ -2.42
HMGB1P30-201ENST00000492455 CLIP1P30622 1438 aa-0.04□□□□□ -2.42
HMGB1P30-201ENST00000492455 PCLOQ9Y6V0 5065 aa-0.05□□□□□ -2.42
HMGB1P30-201ENST00000492455 USF3Q68DE3 2245 aa-0.05□□□□□ -2.42
HMGB1P30-201ENST00000492455 EP300Q09472 2414 aaPredicted RBP-0.05□□□□□ -2.42
HMGB1P30-201ENST00000492455 GVINP1Q7Z2Y8 2422 aa-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 154 ms