RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 BRI3O95415 125 aa10.92□□□□□ -0.66
TNFRSF1B-203ENST00000492361 LINC00242Q5T6M2 205 aa10.92□□□□□ -0.66
TNFRSF1B-203ENST00000492361 C11orf72Q8NBR9 251 aa10.91□□□□□ -0.66
TNFRSF1B-203ENST00000492361 B5MCH6 92 aa10.91□□□□□ -0.66
TNFRSF1B-203ENST00000492361 HERVK_113P63121 156 aa10.91□□□□□ -0.66
TNFRSF1B-203ENST00000492361 ATP5G1P05496 136 aa10.9□□□□□ -0.66
TNFRSF1B-203ENST00000492361 C6orf226Q5I0X4 101 aa10.9□□□□□ -0.66
TNFRSF1B-203ENST00000492361 LINC00482Q8N8I6 264 aa10.9□□□□□ -0.66
TNFRSF1B-203ENST00000492361 A0A0B4J2C4 111 aa10.9□□□□□ -0.66
TNFRSF1B-203ENST00000492361 MIR7-3HGQ8N6C7 128 aa10.9□□□□□ -0.67
TNFRSF1B-203ENST00000492361 NTM-AS1Q6ZSK4 140 aa10.89□□□□□ -0.67
TNFRSF1B-203ENST00000492361 LINC00308Q8TCZ7 52 aa10.89□□□□□ -0.67
TNFRSF1B-203ENST00000492361 CLUHP3Q96NS8 147 aa10.89□□□□□ -0.67
TNFRSF1B-203ENST00000492361 SS18L2Q9UHA2 77 aa10.89□□□□□ -0.67
TNFRSF1B-203ENST00000492361 Q8N2B8 174 aa10.88□□□□□ -0.67
TNFRSF1B-203ENST00000492361 PYGO1Q9Y3Y4 419 aa10.88□□□□□ -0.67
TNFRSF1B-203ENST00000492361 A0A096LNT2 108 aa10.88□□□□□ -0.67
TNFRSF1B-203ENST00000492361 DNAL4O96015 105 aa10.88□□□□□ -0.67
TNFRSF1B-203ENST00000492361 TRBV10-2A0A0K0K1G8 114 aa10.88□□□□□ -0.67
TNFRSF1B-203ENST00000492361 H7C423 109 aa10.88□□□□□ -0.67
TNFRSF1B-203ENST00000492361 LINC01006Q8NI28 216 aa10.88□□□□□ -0.67
TNFRSF1B-203ENST00000492361 GAGE2AQ6NT46 116 aa10.87□□□□□ -0.67
TNFRSF1B-203ENST00000492361 CRPP02741 224 aa10.87□□□□□ -0.67
TNFRSF1B-203ENST00000492361 CR1P17927 2039 aa10.87□□□□□ -0.67
TNFRSF1B-203ENST00000492361 IGLV4-60A0A075B6I1 120 aa10.86□□□□□ -0.67
TNFRSF1B-203ENST00000492361 FAM104AQ969W3 186 aa10.86□□□□□ -0.67
TNFRSF1B-203ENST00000492361 NOTCH1P46531 2555 aa10.86□□□□□ -0.67
TNFRSF1B-203ENST00000492361 LINC00526Q96FQ7 95 aa10.86□□□□□ -0.67
TNFRSF1B-203ENST00000492361 GYPEP15421 78 aa10.85□□□□□ -0.67
TNFRSF1B-203ENST00000492361 SLPIP03973 132 aa10.85□□□□□ -0.67
TNFRSF1B-203ENST00000492361 LITAFQ99732 161 aa10.85□□□□□ -0.67
TNFRSF1B-203ENST00000492361 HIVEP1P15822 2718 aa10.84□□□□□ -0.67
TNFRSF1B-203ENST00000492361 VWFP04275 2813 aa10.84□□□□□ -0.67
TNFRSF1B-203ENST00000492361 BAALC-AS2P0C853 105 aa10.84□□□□□ -0.67
TNFRSF1B-203ENST00000492361 ATP6V0E2Q8NHE4 81 aa10.84□□□□□ -0.67
TNFRSF1B-203ENST00000492361 ZNF469Q96JG9 3925 aaPredicted RBP10.84□□□□□ -0.67
TNFRSF1B-203ENST00000492361 SMIM1B2RUZ4 78 aa10.84□□□□□ -0.67
TNFRSF1B-203ENST00000492361 SND1-IT1Q9HBX3 110 aa10.84□□□□□ -0.67
TNFRSF1B-203ENST00000492361 SOSTDC1Q6X4U4 206 aa10.83□□□□□ -0.67
TNFRSF1B-203ENST00000492361 DNAJC30Q96LL9 226 aa10.83□□□□□ -0.67
TNFRSF1B-203ENST00000492361 MAST4O15021 2626 aa10.83□□□□□ -0.68
TNFRSF1B-203ENST00000492361 NBEAL1Q6ZS30 2694 aa10.83□□□□□ -0.68
TNFRSF1B-203ENST00000492361 DEFB135Q30KP9 77 aa10.83□□□□□ -0.68
TNFRSF1B-203ENST00000492361 TRBV30A0A0K0K1B3 111 aa10.82□□□□□ -0.68
TNFRSF1B-203ENST00000492361 PRR3P79522 188 aaKnown RBP10.82□□□□□ -0.68
TNFRSF1B-203ENST00000492361 DAZ2Q13117 558 aaKnown RBP10.82□□□□□ -0.68
TNFRSF1B-203ENST00000492361 DAZ4Q86SG3 579 aaKnown RBP10.82□□□□□ -0.68
TNFRSF1B-203ENST00000492361 DAZ3Q9NR90 486 aaKnown RBP10.82□□□□□ -0.68
TNFRSF1B-203ENST00000492361 CDC42SE2Q9NRR3 84 aa10.82□□□□□ -0.68
TNFRSF1B-203ENST00000492361 NDUFA1O15239 70 aa10.81□□□□□ -0.68
TNFRSF1B-203ENST00000492361 COX7B2Q8TF08 81 aa10.81□□□□□ -0.68
TNFRSF1B-203ENST00000492361 ANGP03950 147 aaKnown RBP10.79□□□□□ -0.68
TNFRSF1B-203ENST00000492361 MALP21145 153 aa10.79□□□□□ -0.68
TNFRSF1B-203ENST00000492361 Q8N3U1 123 aa10.78□□□□□ -0.68
TNFRSF1B-203ENST00000492361 SPANXDQ9BXN6 97 aa10.78□□□□□ -0.68
TNFRSF1B-203ENST00000492361 SPANXCQ9NY87 97 aa10.78□□□□□ -0.68
TNFRSF1B-203ENST00000492361 F5H768 121 aa10.78□□□□□ -0.68
TNFRSF1B-203ENST00000492361 SCGB1A1P11684 91 aa10.77□□□□□ -0.68
TNFRSF1B-203ENST00000492361 IFITM1P13164 125 aa10.77□□□□□ -0.68
TNFRSF1B-203ENST00000492361 BEAN1Q3B7T3 259 aa10.77□□□□□ -0.68
TNFRSF1B-203ENST00000492361 TENM4Q6N022 2769 aa10.77□□□□□ -0.69
TNFRSF1B-203ENST00000492361 LST1O00453 97 aa10.77□□□□□ -0.69
TNFRSF1B-203ENST00000492361 TIRAPP58753 221 aa10.77□□□□□ -0.69
TNFRSF1B-203ENST00000492361 C16orf74Q96GX8 76 aa10.77□□□□□ -0.69
TNFRSF1B-203ENST00000492361 LECT2O14960 151 aa10.76□□□□□ -0.69
TNFRSF1B-203ENST00000492361 RNF152Q8N8N0 203 aa10.76□□□□□ -0.69
TNFRSF1B-203ENST00000492361 FSHBP01225 129 aa10.76□□□□□ -0.69
TNFRSF1B-203ENST00000492361 STAB1Q9NY15 2570 aa10.76□□□□□ -0.69
TNFRSF1B-203ENST00000492361 CCDC179H3BU77 68 aa10.75□□□□□ -0.69
TNFRSF1B-203ENST00000492361 C9orf116Q5BN46 136 aaPredicted RBP10.75□□□□□ -0.69
TNFRSF1B-203ENST00000492361 C14orf132Q9NPU4 83 aa10.75□□□□□ -0.69
TNFRSF1B-203ENST00000492361 TRBV10-1A0A0K0K1A3 114 aa10.75□□□□□ -0.69
TNFRSF1B-203ENST00000492361 TRBV6-8A0A0A6YYG3 113 aa10.74□□□□□ -0.69
TNFRSF1B-203ENST00000492361 IGKV3D-7A0A0C4DH55 119 aa10.74□□□□□ -0.69
TNFRSF1B-203ENST00000492361 FAM218AQ96MZ4 157 aa10.74□□□□□ -0.69
TNFRSF1B-203ENST00000492361 FAM222AQ5U5X8 452 aa10.74□□□□□ -0.69
TNFRSF1B-203ENST00000492361 LINC00269Q8N2A0 174 aa10.74□□□□□ -0.69
TNFRSF1B-203ENST00000492361 CFAP161Q6P656 301 aa10.74□□□□□ -0.69
TNFRSF1B-203ENST00000492361 MGAM2Q2M2H8 2515 aa10.73□□□□□ -0.69
TNFRSF1B-203ENST00000492361 COX7A2LO14548 114 aa10.73□□□□□ -0.69
TNFRSF1B-203ENST00000492361 NDUFV3P56181 108 aaKnown RBP10.73□□□□□ -0.69
TNFRSF1B-203ENST00000492361 COPS9Q8WXC6 57 aa10.73□□□□□ -0.69
TNFRSF1B-203ENST00000492361 FAM236AA0A1B0GUQ0 79 aa10.72□□□□□ -0.69
TNFRSF1B-203ENST00000492361 FAM236BA0A1B0GV22 79 aa10.72□□□□□ -0.69
TNFRSF1B-203ENST00000492361 SS18Q15532 418 aa10.72□□□□□ -0.69
TNFRSF1B-203ENST00000492361 TENM1Q9UKZ4 2725 aa10.72□□□□□ -0.69
TNFRSF1B-203ENST00000492361 TRAV25A0A0B4J276 109 aa10.71□□□□□ -0.69
TNFRSF1B-203ENST00000492361 H3BT86 120 aa10.71□□□□□ -0.69
TNFRSF1B-203ENST00000492361 GIG44P09565 113 aaPredicted RBP10.71□□□□□ -0.69
TNFRSF1B-203ENST00000492361 LINC00337Q8N6G1 96 aa10.71□□□□□ -0.69
TNFRSF1B-203ENST00000492361 NCR3O14931 201 aa10.7□□□□□ -0.7
TNFRSF1B-203ENST00000492361 CCL18P55774 89 aa10.7□□□□□ -0.7
TNFRSF1B-203ENST00000492361 SPATA3Q8NHX4 192 aa10.7□□□□□ -0.7
TNFRSF1B-203ENST00000492361 SMIM11BQ8TCY0 68 aa10.7□□□□□ -0.7
TNFRSF1B-203ENST00000492361 PDZD2O15018 2839 aa10.7□□□□□ -0.7
TNFRSF1B-203ENST00000492361 A0A087WYN8 130 aa10.7□□□□□ -0.7
TNFRSF1B-203ENST00000492361 DAD1P61803 113 aa10.7□□□□□ -0.7
TNFRSF1B-203ENST00000492361 FHL2Q14192 279 aa10.7□□□□□ -0.7
TNFRSF1B-203ENST00000492361 SBSPONQ8IVN8 264 aa10.69□□□□□ -0.7
TNFRSF1B-203ENST00000492361 HIST1H4AP62805 103 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms