RNA–Protein interactions for RNA: ENST00000487880.2

USP48-209, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 524 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-209ENST00000487880 TP53TG1Q9Y2A0 90 aa1.65□□□□□ -2.15
USP48-209ENST00000487880 TIMM8BQ9Y5J9 83 aaPredicted RBP1.65□□□□□ -2.15
USP48-209ENST00000487880 KIAA1549Q9HCM3 1950 aa1.65□□□□□ -2.15
USP48-209ENST00000487880 CEP192Q8TEP8 1941 aa1.64□□□□□ -2.15
USP48-209ENST00000487880 TRBV19A0A075B6N1 114 aa1.64□□□□□ -2.15
USP48-209ENST00000487880 TRAV3A0A0B4J244 114 aa1.64□□□□□ -2.15
USP48-209ENST00000487880 A0A0J9YW62 118 aa1.64□□□□□ -2.15
USP48-209ENST00000487880 TRBV10-3A0A0K0K1G6 114 aa1.64□□□□□ -2.15
USP48-209ENST00000487880 SPTY2D1-AS1A0A0U1RR47 76 aa1.64□□□□□ -2.15
USP48-209ENST00000487880 J3QQQ9 107 aa1.64□□□□□ -2.15
USP48-209ENST00000487880 LST1O00453 97 aa1.64□□□□□ -2.15
USP48-209ENST00000487880 CCL16O15467 120 aa1.64□□□□□ -2.15
USP48-209ENST00000487880 CRIP1P50238 77 aa1.64□□□□□ -2.15
USP48-209ENST00000487880 NPC2P61916 151 aa1.64□□□□□ -2.15
USP48-209ENST00000487880 ZNF56Q15929 161 aa1.64□□□□□ -2.15
USP48-209ENST00000487880 TMEM155Q4W5P6 130 aa1.64□□□□□ -2.15
USP48-209ENST00000487880 SPINK9Q5DT21 86 aa1.64□□□□□ -2.15
USP48-209ENST00000487880 ATP5EP2Q5VTU8 51 aa1.64□□□□□ -2.15
USP48-209ENST00000487880 C1orf158Q8N1D5 194 aa1.64□□□□□ -2.15
USP48-209ENST00000487880 FAM216BQ8N7L0 139 aa1.64□□□□□ -2.15
USP48-209ENST00000487880 CCL4L1Q8NHW4 92 aa1.64□□□□□ -2.15
USP48-209ENST00000487880 TMEM141Q96I45 108 aa1.64□□□□□ -2.15
USP48-209ENST00000487880 SLC50A1Q9BRV3 221 aa1.64□□□□□ -2.15
USP48-209ENST00000487880 SMIM2Q9BVW6 85 aa1.64□□□□□ -2.15
USP48-209ENST00000487880 TTTY13Q9BZ97 58 aa1.64□□□□□ -2.15
USP48-209ENST00000487880 PRO2289Q9P1D8 64 aa1.64□□□□□ -2.15
USP48-209ENST00000487880 SERP1Q9Y6X1 66 aa1.64□□□□□ -2.15
USP48-209ENST00000487880 A0A0C4DFX4 3053 aa1.63□□□□□ -2.15
USP48-209ENST00000487880 PTPRBP23467 1997 aa1.63□□□□□ -2.15
USP48-209ENST00000487880 SDK1Q7Z5N4 2213 aa1.63□□□□□ -2.15
USP48-209ENST00000487880 TMSB15BA0A087X1C1 80 aa1.63□□□□□ -2.15
USP48-209ENST00000487880 TRGV5A0A0B4J1U4 118 aa1.63□□□□□ -2.15
USP48-209ENST00000487880 TEX49A0A1B0GTD5 131 aa1.63□□□□□ -2.15
USP48-209ENST00000487880 LEPROTO15243 131 aa1.63□□□□□ -2.15
USP48-209ENST00000487880 NDUFC1O43677 76 aa1.63□□□□□ -2.15
USP48-209ENST00000487880 TIMM17BO60830 172 aa1.63□□□□□ -2.15
USP48-209ENST00000487880 MRPL33O75394 65 aaKnown RBP1.63□□□□□ -2.15
USP48-209ENST00000487880 NDUFA3O95167 84 aa1.63□□□□□ -2.15
USP48-209ENST00000487880 IGHV1-69P01742 117 aa1.63□□□□□ -2.15
USP48-209ENST00000487880 C4orf26Q17RF5 130 aa1.63□□□□□ -2.15
USP48-209ENST00000487880 S100A7L2Q5SY68 101 aa1.63□□□□□ -2.15
USP48-209ENST00000487880 Q6JHZ5 121 aa1.63□□□□□ -2.15
USP48-209ENST00000487880 HRCT1Q6UXD1 115 aa1.63□□□□□ -2.15
USP48-209ENST00000487880 ZNF833PQ6ZTB9 187 aa1.63□□□□□ -2.15
USP48-209ENST00000487880 LINC00311Q8N616 119 aa1.63□□□□□ -2.15
USP48-209ENST00000487880 TMEM86BQ8N661 226 aa1.63□□□□□ -2.15
USP48-209ENST00000487880 SCGB3A1Q96QR1 104 aa1.63□□□□□ -2.15
USP48-209ENST00000487880 DPH3P1Q9H4G8 78 aa1.63□□□□□ -2.15
USP48-209ENST00000487880 LENEPQ9Y5L5 61 aa1.63□□□□□ -2.15
USP48-209ENST00000487880 RP1P56715 2156 aa1.63□□□□□ -2.15
USP48-209ENST00000487880 UNC13CQ8NB66 2214 aa1.63□□□□□ -2.15
USP48-209ENST00000487880 TENM1Q9UKZ4 2725 aa1.62□□□□□ -2.15
USP48-209ENST00000487880 IGLV3-9A0A075B6K5 115 aa1.62□□□□□ -2.15
USP48-209ENST00000487880 TRBV7-1A0A0A6YYK4 115 aa1.62□□□□□ -2.15
USP48-209ENST00000487880 IGHV3-15A0A0B4J1V0 119 aa1.62□□□□□ -2.15
USP48-209ENST00000487880 FAM236DA0A1B0GTK5 79 aa1.62□□□□□ -2.15
USP48-209ENST00000487880 hADV29S1A0JD25 119 aa1.62□□□□□ -2.15
USP48-209ENST00000487880 C5orf67F2Z3F1 127 aa1.62□□□□□ -2.15
USP48-209ENST00000487880 SAA1P0DJI8 122 aaPredicted RBP1.62□□□□□ -2.15
USP48-209ENST00000487880 SAA2P0DJI9 122 aaPredicted RBP1.62□□□□□ -2.15
USP48-209ENST00000487880 FAM236CP0DP71 79 aa1.62□□□□□ -2.15
USP48-209ENST00000487880 VMA21Q3ZAQ7 101 aa1.62□□□□□ -2.15
USP48-209ENST00000487880 RPL39P5Q59GN2 51 aa1.62□□□□□ -2.15
USP48-209ENST00000487880 C1orf195Q5TG92 126 aa1.62□□□□□ -2.15
USP48-209ENST00000487880 PATE1Q8WXA2 126 aa1.62□□□□□ -2.15
USP48-209ENST00000487880 AMELXQ99217 191 aa1.62□□□□□ -2.15
USP48-209ENST00000487880 TIMM21Q9BVV7 248 aa1.62□□□□□ -2.15
USP48-209ENST00000487880 PROK2Q9HC23 129 aa1.62□□□□□ -2.15
USP48-209ENST00000487880 CR1P17927 2039 aa1.62□□□□□ -2.15
USP48-209ENST00000487880 RTTNQ86VV8 2226 aa1.62□□□□□ -2.15
USP48-209ENST00000487880 ESPL1Q14674 2120 aa1.61□□□□□ -2.15
USP48-209ENST00000487880 FN1P02751 2386 aaKnown RBP1.61□□□□□ -2.15
USP48-209ENST00000487880 TRAV26-2A0A0B4J265 109 aa1.61□□□□□ -2.15
USP48-209ENST00000487880 TRBV7-6A0A0J9YX20 115 aa1.61□□□□□ -2.15
USP48-209ENST00000487880 TRBV6-5A0A0K0K1A5 114 aa1.61□□□□□ -2.15
USP48-209ENST00000487880 IGIPA6NJ69 53 aa1.61□□□□□ -2.15
USP48-209ENST00000487880 M0R3E3 92 aa1.61□□□□□ -2.15
USP48-209ENST00000487880 COX7A2LO14548 114 aa1.61□□□□□ -2.15
USP48-209ENST00000487880 GNRH2O43555 120 aa1.61□□□□□ -2.15
USP48-209ENST00000487880 CCL3P10147 92 aa1.61□□□□□ -2.15
USP48-209ENST00000487880 FXYD7P58549 80 aa1.61□□□□□ -2.15
USP48-209ENST00000487880 WT1-ASQ06250 92 aa1.61□□□□□ -2.15
USP48-209ENST00000487880 KLKP1Q107X0 134 aa1.61□□□□□ -2.15
USP48-209ENST00000487880 RHOHQ15669 191 aa1.61□□□□□ -2.15
USP48-209ENST00000487880 EXOC3-AS1Q8N2X6 119 aa1.61□□□□□ -2.15
USP48-209ENST00000487880 OBSCN-AS1Q96MR7 158 aa1.61□□□□□ -2.15
USP48-209ENST00000487880 KLK5Q9Y337 293 aaPredicted RBP1.61□□□□□ -2.15
USP48-209ENST00000487880 RP1L1Q8IWN7 2480 aaPredicted RBP1.61□□□□□ -2.15
USP48-209ENST00000487880 TET1Q8NFU7 2136 aa1.6□□□□□ -2.15
USP48-209ENST00000487880 TRAV7A0A075B6U4 112 aa1.6□□□□□ -2.15
USP48-209ENST00000487880 IGHV1-18A0A0C4DH31 117 aa1.6□□□□□ -2.15
USP48-209ENST00000487880 TRBV27A0A0K0K1C4 114 aa1.6□□□□□ -2.15
USP48-209ENST00000487880 DEFB108AA8MXU0 73 aa1.6□□□□□ -2.15
USP48-209ENST00000487880 I3L2K1 104 aa1.6□□□□□ -2.15
USP48-209ENST00000487880 I3L3M4 83 aa1.6□□□□□ -2.15
USP48-209ENST00000487880 RPL27AP46776 148 aaKnown RBP1.6□□□□□ -2.15
USP48-209ENST00000487880 ZNF80P51504 273 aaPredicted RBP1.6□□□□□ -2.15
USP48-209ENST00000487880 POLR2KP53803 58 aaKnown RBP1.6□□□□□ -2.15
USP48-209ENST00000487880 MIAQ16674 131 aa1.6□□□□□ -2.15
USP48-209ENST00000487880 KLK9Q2XQG4 91 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms