RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 NIPBLQ6KC79 2804 aaeCLIP12.52□□□□□ -0.41
TNXB-205ENST00000486148 K7EQD1 137 aa12.51□□□□□ -0.41
TNXB-205ENST00000486148 NDUFA1O15239 70 aa12.51□□□□□ -0.41
TNXB-205ENST00000486148 CITED2Q99967 270 aaPredicted RBP12.51□□□□□ -0.41
TNXB-205ENST00000486148 LST1O00453 97 aa12.51□□□□□ -0.41
TNXB-205ENST00000486148 SMCR5Q8TEV8 140 aa12.51□□□□□ -0.41
TNXB-205ENST00000486148 TIMM17BO60830 172 aa12.5□□□□□ -0.41
TNXB-205ENST00000486148 C3orf22Q8N5N4 141 aa12.5□□□□□ -0.41
TNXB-205ENST00000486148 CCDC168Q8NDH2 2452 aa12.5□□□□□ -0.41
TNXB-205ENST00000486148 RPL36AP83881 106 aaKnown RBP12.5□□□□□ -0.41
TNXB-205ENST00000486148 RPL36ALQ969Q0 106 aaKnown RBP12.5□□□□□ -0.41
TNXB-205ENST00000486148 FLNAP21333 2647 aaKnown RBP12.49□□□□□ -0.41
TNXB-205ENST00000486148 SETXQ7Z333 2677 aaKnown RBP12.49□□□□□ -0.41
TNXB-205ENST00000486148 SETD2Q9BYW2 2564 aaPredicted RBP12.49□□□□□ -0.41
TNXB-205ENST00000486148 IGLV5-39A0A0G2JS06 123 aa12.49□□□□□ -0.41
TNXB-205ENST00000486148 GIG44P09565 113 aaPredicted RBP12.49□□□□□ -0.41
TNXB-205ENST00000486148 HERVK_113P63121 156 aa12.49□□□□□ -0.41
TNXB-205ENST00000486148 NOP10Q9NPE3 64 aaKnown RBP12.49□□□□□ -0.41
TNXB-205ENST00000486148 C2CD3Q4AC94 2353 aa12.49□□□□□ -0.41
TNXB-205ENST00000486148 WFDC10AQ9H1F0 79 aa12.48□□□□□ -0.41
TNXB-205ENST00000486148 TRAV13-1A0A0B4J241 112 aa12.48□□□□□ -0.41
TNXB-205ENST00000486148 TRBV10-1A0A0K0K1A3 114 aa12.48□□□□□ -0.41
TNXB-205ENST00000486148 ZNF625Q96I27 306 aaPredicted RBP12.48□□□□□ -0.41
TNXB-205ENST00000486148 Q9H8V8 135 aa12.48□□□□□ -0.41
TNXB-205ENST00000486148 JMJD1CQ15652 2540 aa12.48□□□□□ -0.41
TNXB-205ENST00000486148 COX6CP09669 75 aa12.47□□□□□ -0.41
TNXB-205ENST00000486148 DAZ2Q13117 558 aaKnown RBP12.47□□□□□ -0.41
TNXB-205ENST00000486148 C5orf47Q569G3 176 aa12.47□□□□□ -0.41
TNXB-205ENST00000486148 DAZ4Q86SG3 579 aaKnown RBP12.47□□□□□ -0.41
TNXB-205ENST00000486148 DAZ3Q9NR90 486 aaKnown RBP12.47□□□□□ -0.41
TNXB-205ENST00000486148 SMIM1B2RUZ4 78 aa12.46□□□□□ -0.41
TNXB-205ENST00000486148 IMUPQ9GZP8 106 aa12.46□□□□□ -0.41
TNXB-205ENST00000486148 A0A0U1RRA0 63 aa12.46□□□□□ -0.41
TNXB-205ENST00000486148 HIST2H2BCQ6DN03 193 aa12.46□□□□□ -0.41
TNXB-205ENST00000486148 FAM19A3Q7Z5A8 133 aa12.46□□□□□ -0.41
TNXB-205ENST00000486148 PLAC8L1A1L4L8 177 aa12.45□□□□□ -0.42
TNXB-205ENST00000486148 UQCRQO14949 82 aa12.45□□□□□ -0.42
TNXB-205ENST00000486148 CDC42SE2Q9NRR3 84 aa12.45□□□□□ -0.42
TNXB-205ENST00000486148 FAM19A5Q7Z5A7 132 aaPredicted RBP12.45□□□□□ -0.42
TNXB-205ENST00000486148 LINC00526Q96FQ7 95 aa12.45□□□□□ -0.42
TNXB-205ENST00000486148 SMIM9A6NGZ8 99 aa12.44□□□□□ -0.42
TNXB-205ENST00000486148 LINC01006Q8NI28 216 aa12.44□□□□□ -0.42
TNXB-205ENST00000486148 LINC00308Q8TCZ7 52 aa12.44□□□□□ -0.42
TNXB-205ENST00000486148 CIRBPQ14011 172 aaKnown RBP12.44□□□□□ -0.42
TNXB-205ENST00000486148 LOC100131303A0A0U1RQF7 123 aa12.43□□□□□ -0.42
TNXB-205ENST00000486148 RPL35AP18077 110 aaKnown RBP12.43□□□□□ -0.42
TNXB-205ENST00000486148 F5H768 121 aa12.42□□□□□ -0.42
TNXB-205ENST00000486148 PLA2G2AP14555 144 aa12.42□□□□□ -0.42
TNXB-205ENST00000486148 SOSTDC1Q6X4U4 206 aa12.42□□□□□ -0.42
TNXB-205ENST00000486148 J3KT08 172 aa12.41□□□□□ -0.42
TNXB-205ENST00000486148 KRTAP1-1Q07627 177 aa12.41□□□□□ -0.42
TNXB-205ENST00000486148 C19orf73Q9NVV2 129 aa12.41□□□□□ -0.42
TNXB-205ENST00000486148 TRGV2A0A075B6R0 118 aa12.4□□□□□ -0.42
TNXB-205ENST00000486148 ACYP1P07311 99 aa12.4□□□□□ -0.42
TNXB-205ENST00000486148 LINC00643Q86TS7 51 aa12.4□□□□□ -0.42
TNXB-205ENST00000486148 PRIMA1Q86XR5 153 aa12.4□□□□□ -0.42
TNXB-205ENST00000486148 C16orf74Q96GX8 76 aa12.4□□□□□ -0.42
TNXB-205ENST00000486148 TMEM243Q9BU79 118 aa12.4□□□□□ -0.42
TNXB-205ENST00000486148 ACANP16112 2415 aa12.39□□□□□ -0.43
TNXB-205ENST00000486148 UBE2L6O14933 153 aa12.39□□□□□ -0.43
TNXB-205ENST00000486148 C2orf48Q96LS8 159 aa12.39□□□□□ -0.43
TNXB-205ENST00000486148 A0A1B0GX51 115 aa12.38□□□□□ -0.43
TNXB-205ENST00000486148 IGLV1-51P01701 117 aa12.38□□□□□ -0.43
TNXB-205ENST00000486148 CSNK1G2-AS1Q8NCQ2 148 aa12.38□□□□□ -0.43
TNXB-205ENST00000486148 CYSTM1Q9H1C7 97 aa12.38□□□□□ -0.43
TNXB-205ENST00000486148 TENM4Q6N022 2769 aa12.38□□□□□ -0.43
TNXB-205ENST00000486148 SDIM1Q6ZPB5 146 aa12.37□□□□□ -0.43
TNXB-205ENST00000486148 COX7CP15954 63 aa12.37□□□□□ -0.43
TNXB-205ENST00000486148 CMC4P56277 68 aaPredicted RBP12.37□□□□□ -0.43
TNXB-205ENST00000486148 C16orf95Q9H693 158 aa12.37□□□□□ -0.43
TNXB-205ENST00000486148 C5orf38Q86SI9 138 aa12.36□□□□□ -0.43
TNXB-205ENST00000486148 MTORP42345 2549 aa12.36□□□□□ -0.43
TNXB-205ENST00000486148 RNASE1P07998 156 aaKnown RBP12.36□□□□□ -0.43
TNXB-205ENST00000486148 PDZD2O15018 2839 aa12.36□□□□□ -0.43
TNXB-205ENST00000486148 TRBV6-4A0A1B0GX49 114 aa12.35□□□□□ -0.43
TNXB-205ENST00000486148 OVOL2Q9BRP0 275 aa12.35□□□□□ -0.43
TNXB-205ENST00000486148 TRGV4A0A0C4DH28 118 aa12.34□□□□□ -0.43
TNXB-205ENST00000486148 ATP5G1P05496 136 aa12.34□□□□□ -0.43
TNXB-205ENST00000486148 GAGE2AQ6NT46 116 aa12.34□□□□□ -0.43
TNXB-205ENST00000486148 ANK3Q12955 4377 aaKnown RBP12.33□□□□□ -0.44
TNXB-205ENST00000486148 CRYGAP11844 174 aa12.33□□□□□ -0.44
TNXB-205ENST00000486148 C22orf24Q9Y442 160 aa12.33□□□□□ -0.44
TNXB-205ENST00000486148 IGKV3OR2-268A0A0C4DH90 116 aa12.33□□□□□ -0.44
TNXB-205ENST00000486148 hADV29S1A0JD25 119 aa12.33□□□□□ -0.44
TNXB-205ENST00000486148 FHL2Q14192 279 aa12.32□□□□□ -0.44
TNXB-205ENST00000486148 IGLV4-60A0A075B6I1 120 aa12.32□□□□□ -0.44
TNXB-205ENST00000486148 CXCL5P42830 114 aa12.31□□□□□ -0.44
TNXB-205ENST00000486148 COPS9Q8WXC6 57 aa12.31□□□□□ -0.44
TNXB-205ENST00000486148 HIST1H4AP62805 103 aaKnown RBP12.31□□□□□ -0.44
TNXB-205ENST00000486148 COX7A2LO14548 114 aa12.3□□□□□ -0.44
TNXB-205ENST00000486148 RPS28P62857 69 aaKnown RBP12.3□□□□□ -0.44
TNXB-205ENST00000486148 KIR2DL5BQ8NHK3 375 aa12.29□□□□□ -0.44
TNXB-205ENST00000486148 COX7B2Q8TF08 81 aa12.29□□□□□ -0.44
TNXB-205ENST00000486148 TRBV6-8A0A0A6YYG3 113 aa12.29□□□□□ -0.44
TNXB-205ENST00000486148 TOMM7Q9P0U1 55 aa12.29□□□□□ -0.44
TNXB-205ENST00000486148 WIPF1O43516 503 aa12.27□□□□□ -0.44
TNXB-205ENST00000486148 OXTP01178 125 aa12.27□□□□□ -0.45
TNXB-205ENST00000486148 ITPR2Q14571 2701 aa12.27□□□□□ -0.45
TNXB-205ENST00000486148 BAALC-AS2P0C853 105 aa12.26□□□□□ -0.45
TNXB-205ENST00000486148 OR13C6PQ8NH95 151 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms