RNA–Protein interactions for RNA: ENST00000483690.1

MCF2-207, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

TSL 3

Gene MCF2, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-207ENST00000483690 C10orf82Q8WW14 230 aa1.5□□□□□ -2.17
MCF2-207ENST00000483690 AGPAT4-IT1Q9H0P7 198 aa1.5□□□□□ -2.17
MCF2-207ENST00000483690 HLA-DRB4X5D2U9 266 aa1.5□□□□□ -2.17
MCF2-207ENST00000483690 PTPN13Q12923 2485 aa1.5□□□□□ -2.17
MCF2-207ENST00000483690 USP34Q70CQ2 3546 aa1.5□□□□□ -2.17
MCF2-207ENST00000483690 USP24Q9UPU5 2620 aa1.5□□□□□ -2.17
MCF2-207ENST00000483690 A0A0G2JMZ2 1700 aa1.49□□□□□ -2.17
MCF2-207ENST00000483690 GCN1Q92616 2671 aaKnown RBP1.49□□□□□ -2.17
MCF2-207ENST00000483690 H3BQ15 152 aa1.49□□□□□ -2.17
MCF2-207ENST00000483690 K7EP34 96 aa1.49□□□□□ -2.17
MCF2-207ENST00000483690 APOC4-APOC2K7ER74 178 aa1.49□□□□□ -2.17
MCF2-207ENST00000483690 APOC2P02655 101 aa1.49□□□□□ -2.17
MCF2-207ENST00000483690 DEFA5Q01523 94 aa1.49□□□□□ -2.17
MCF2-207ENST00000483690 TMEM91Q6ZNR0 172 aa1.49□□□□□ -2.17
MCF2-207ENST00000483690 Q6ZS92 163 aa1.49□□□□□ -2.17
MCF2-207ENST00000483690 NPVFQ9HCQ7 196 aa1.49□□□□□ -2.17
MCF2-207ENST00000483690 SERP1Q9Y6X1 66 aa1.49□□□□□ -2.17
MCF2-207ENST00000483690 VPS13AQ96RL7 3174 aa1.49□□□□□ -2.17
MCF2-207ENST00000483690 ZNF462Q96JM2 2506 aa1.49□□□□□ -2.17
MCF2-207ENST00000483690 GVINP1Q7Z2Y8 2422 aa1.49□□□□□ -2.17
MCF2-207ENST00000483690 NBPF19A0A087WUL8 3843 aa1.49□□□□□ -2.17
MCF2-207ENST00000483690 EP300Q09472 2414 aaPredicted RBP1.48□□□□□ -2.17
MCF2-207ENST00000483690 CACNA1HO95180 2353 aa1.48□□□□□ -2.17
MCF2-207ENST00000483690 LAMA5O15230 3695 aa1.48□□□□□ -2.17
MCF2-207ENST00000483690 KIAA1549LQ6ZVL6 1849 aa1.48□□□□□ -2.17
MCF2-207ENST00000483690 TRBV20-1A0A075B6N2 111 aa1.48□□□□□ -2.17
MCF2-207ENST00000483690 IGLC7A0M8Q6 106 aa1.48□□□□□ -2.17
MCF2-207ENST00000483690 NUPR2A6NF83 97 aa1.48□□□□□ -2.17
MCF2-207ENST00000483690 MCRIP1C9JLW8 97 aa1.48□□□□□ -2.17
MCF2-207ENST00000483690 PITX3O75364 302 aa1.48□□□□□ -2.17
MCF2-207ENST00000483690 IGHV3-30P01768 117 aa1.48□□□□□ -2.17
MCF2-207ENST00000483690 RBP4P02753 201 aa1.48□□□□□ -2.17
MCF2-207ENST00000483690 MT-ATP8P03928 68 aa1.48□□□□□ -2.17
MCF2-207ENST00000483690 SLC25A5P05141 298 aaKnown RBP1.48□□□□□ -2.17
MCF2-207ENST00000483690 NMBP08949 121 aa1.48□□□□□ -2.17
MCF2-207ENST00000483690 IGHV3-30-5P0DP03 117 aa1.48□□□□□ -2.17
MCF2-207ENST00000483690 SLC25A4P12235 298 aa1.48□□□□□ -2.17
MCF2-207ENST00000483690 SNRPD3P62318 126 aaKnown RBP1.48□□□□□ -2.17
MCF2-207ENST00000483690 OR2T2Q6IF00 324 aa1.48□□□□□ -2.17
MCF2-207ENST00000483690 UNQ5815/PRO19632Q6UWF5 114 aa1.48□□□□□ -2.17
MCF2-207ENST00000483690 ALKAL2Q6UX46 152 aa1.48□□□□□ -2.17
MCF2-207ENST00000483690 SLC35B3Q9H1N7 401 aa1.48□□□□□ -2.17
MCF2-207ENST00000483690 UQCR10Q9UDW1 63 aa1.48□□□□□ -2.17
MCF2-207ENST00000483690 ZFYVE26Q68DK2 2539 aa1.48□□□□□ -2.17
MCF2-207ENST00000483690 DCHS1Q96JQ0 3298 aa1.48□□□□□ -2.17
MCF2-207ENST00000483690 TCHHQ07283 1943 aa1.48□□□□□ -2.17
MCF2-207ENST00000483690 SPTBN2O15020 2390 aa1.48□□□□□ -2.17
MCF2-207ENST00000483690 DOCK1Q14185 1865 aa1.48□□□□□ -2.17
MCF2-207ENST00000483690 ABCA12Q86UK0 2595 aa1.48□□□□□ -2.17
MCF2-207ENST00000483690 SMG1Q96Q15 3661 aaKnown RBP1.47□□□□□ -2.17
MCF2-207ENST00000483690 PLIN4Q96Q06 1357 aa1.47□□□□□ -2.17
MCF2-207ENST00000483690 PLXNB2O15031 1838 aa1.47□□□□□ -2.17
MCF2-207ENST00000483690 ANKRD17O75179 2603 aaKnown RBP1.47□□□□□ -2.17
MCF2-207ENST00000483690 TEP1Q99973 2627 aaKnown RBP1.47□□□□□ -2.17
MCF2-207ENST00000483690 FRYLO94915 3013 aa1.47□□□□□ -2.17
MCF2-207ENST00000483690 OOSP1A8MZH6 123 aa1.47□□□□□ -2.17
MCF2-207ENST00000483690 M0R129 80 aa1.47□□□□□ -2.17
MCF2-207ENST00000483690 SSSCA1O60232 199 aa1.47□□□□□ -2.17
MCF2-207ENST00000483690 YPEL1O60688 119 aa1.47□□□□□ -2.17
MCF2-207ENST00000483690 NDUFB6O95139 128 aa1.47□□□□□ -2.17
MCF2-207ENST00000483690 SFT2D2O95562 160 aa1.47□□□□□ -2.17
MCF2-207ENST00000483690 HBDP02042 147 aa1.47□□□□□ -2.17
MCF2-207ENST00000483690 GYPAP02724 150 aa1.47□□□□□ -2.17
MCF2-207ENST00000483690 GYPBP06028 91 aa1.47□□□□□ -2.17
MCF2-207ENST00000483690 ASIPP42127 132 aa1.47□□□□□ -2.17
MCF2-207ENST00000483690 BLCAPP62952 87 aa1.47□□□□□ -2.17
MCF2-207ENST00000483690 HMGN3Q15651 99 aa1.47□□□□□ -2.17
MCF2-207ENST00000483690 TDRG1Q3Y452 100 aa1.47□□□□□ -2.17
MCF2-207ENST00000483690 Q86TA4 180 aa1.47□□□□□ -2.17
MCF2-207ENST00000483690 TSLPQ969D9 159 aa1.47□□□□□ -2.17
MCF2-207ENST00000483690 RABAC1Q9UI14 185 aa1.47□□□□□ -2.17
MCF2-207ENST00000483690 DNAJC15Q9Y5T4 150 aa1.47□□□□□ -2.17
MCF2-207ENST00000483690 PLXNA1Q9UIW2 1896 aa1.47□□□□□ -2.17
MCF2-207ENST00000483690 CNOT1A5YKK6 2376 aaKnown RBP1.47□□□□□ -2.17
MCF2-207ENST00000483690 DOCK2Q92608 1830 aa1.46□□□□□ -2.18
MCF2-207ENST00000483690 FAM24AA6NFZ4 105 aa1.46□□□□□ -2.18
MCF2-207ENST00000483690 SNCGO76070 127 aa1.46□□□□□ -2.18
MCF2-207ENST00000483690 CYB5AP00167 134 aa1.46□□□□□ -2.18
MCF2-207ENST00000483690 SLC25A26Q70HW3 274 aa1.46□□□□□ -2.18
MCF2-207ENST00000483690 LSM10Q969L4 123 aaKnown RBP1.46□□□□□ -2.18
MCF2-207ENST00000483690 LSM2Q9Y333 95 aaKnown RBP1.46□□□□□ -2.18
MCF2-207ENST00000483690 DOPEY1Q5JWR5 2465 aa1.46□□□□□ -2.18
MCF2-207ENST00000483690 HELZP42694 1942 aaKnown RBP1.46□□□□□ -2.18
MCF2-207ENST00000483690 HECTD1Q9ULT8 2610 aa1.46□□□□□ -2.18
MCF2-207ENST00000483690 ASPMQ8IZT6 3477 aa1.45□□□□□ -2.18
MCF2-207ENST00000483690 LOC285556D6RIA3 1793 aa1.45□□□□□ -2.18
MCF2-207ENST00000483690 LAMB1P07942 1786 aa1.45□□□□□ -2.18
MCF2-207ENST00000483690 NINQ8N4C6 2090 aa1.45□□□□□ -2.18
MCF2-207ENST00000483690 A0A087WXM4 84 aa1.45□□□□□ -2.18
MCF2-207ENST00000483690 A6NN06 94 aa1.45□□□□□ -2.18
MCF2-207ENST00000483690 CFDP00746 253 aaPredicted RBP1.45□□□□□ -2.18
MCF2-207ENST00000483690 CD3DP04234 171 aa1.45□□□□□ -2.18
MCF2-207ENST00000483690 PRB4P10163 310 aaPredicted RBP1.45□□□□□ -2.18
MCF2-207ENST00000483690 SLC25A6P12236 298 aa1.45□□□□□ -2.18
MCF2-207ENST00000483690 CCL4P13236 92 aa1.45□□□□□ -2.18
MCF2-207ENST00000483690 ATP5EP56381 51 aaPredicted RBP1.45□□□□□ -2.18
MCF2-207ENST00000483690 NPC2P61916 151 aa1.45□□□□□ -2.18
MCF2-207ENST00000483690 SEC11AP67812 179 aa1.45□□□□□ -2.18
MCF2-207ENST00000483690 SPINK9Q5DT21 86 aa1.45□□□□□ -2.18
MCF2-207ENST00000483690 HEPN1Q6WQI6 88 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms