RNA–Protein interactions for RNA: ENST00000483541.1

NSMCE4A-210, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE4A, Length 694 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-210ENST00000483541 FAM167A-AS1Q96KT0 104 aa0.15□□□□□ -2.39
NSMCE4A-210ENST00000483541 NXT2Q9NPJ8 142 aaKnown RBP0.15□□□□□ -2.39
NSMCE4A-210ENST00000483541 MANBALQ9NQG1 85 aa0.15□□□□□ -2.39
NSMCE4A-210ENST00000483541 CDC42SE2Q9NRR3 84 aa0.15□□□□□ -2.39
NSMCE4A-210ENST00000483541 ABCA3Q99758 1704 aa0.15□□□□□ -2.39
NSMCE4A-210ENST00000483541 CELSR1Q9NYQ6 3014 aa0.14□□□□□ -2.39
NSMCE4A-210ENST00000483541 NCOA3Q9Y6Q9 1424 aa0.14□□□□□ -2.39
NSMCE4A-210ENST00000483541 CHD1O14646 1710 aa0.14□□□□□ -2.39
NSMCE4A-210ENST00000483541 Q0VG73 95 aa0.14□□□□□ -2.39
NSMCE4A-210ENST00000483541 PIGYQ3MUY2 71 aa0.14□□□□□ -2.39
NSMCE4A-210ENST00000483541 FAM223AQ8IWN6 122 aa0.14□□□□□ -2.39
NSMCE4A-210ENST00000483541 SPTA1P02549 2419 aa0.14□□□□□ -2.39
NSMCE4A-210ENST00000483541 COL7A1Q02388 2944 aa0.14□□□□□ -2.39
NSMCE4A-210ENST00000483541 PIEZO2Q9H5I5 2752 aa0.13□□□□□ -2.39
NSMCE4A-210ENST00000483541 NUP188Q5SRE5 1749 aa0.13□□□□□ -2.39
NSMCE4A-210ENST00000483541 COX6CP09669 75 aa0.13□□□□□ -2.39
NSMCE4A-210ENST00000483541 IGLC1P0CG04 106 aa0.13□□□□□ -2.39
NSMCE4A-210ENST00000483541 DEFB109BQ30KR1 87 aa0.13□□□□□ -2.39
NSMCE4A-210ENST00000483541 ARL2-SNX15V9GYD0 113 aa0.13□□□□□ -2.39
NSMCE4A-210ENST00000483541 CHD6Q8TD26 2715 aa0.13□□□□□ -2.39
NSMCE4A-210ENST00000483541 TSC2P49815 1807 aa0.13□□□□□ -2.39
NSMCE4A-210ENST00000483541 HMGXB3Q12766 1538 aa0.13□□□□□ -2.39
NSMCE4A-210ENST00000483541 FLNCQ14315 2725 aa0.12□□□□□ -2.39
NSMCE4A-210ENST00000483541 TRBV6-1A0A0K0K1D8 114 aa0.12□□□□□ -2.39
NSMCE4A-210ENST00000483541 CRYM-AS1A6NIL9 109 aa0.12□□□□□ -2.39
NSMCE4A-210ENST00000483541 I3L2K1 104 aa0.12□□□□□ -2.39
NSMCE4A-210ENST00000483541 TRAPPC2P0DI81 140 aa0.12□□□□□ -2.39
NSMCE4A-210ENST00000483541 TRAPPC2BP0DI82 140 aa0.12□□□□□ -2.39
NSMCE4A-210ENST00000483541 UBA52P62987 128 aaKnown RBP0.12□□□□□ -2.39
NSMCE4A-210ENST00000483541 Q5VSD8 79 aa0.12□□□□□ -2.39
NSMCE4A-210ENST00000483541 PRO1854Q9UHT4 67 aa0.12□□□□□ -2.39
NSMCE4A-210ENST00000483541 LRP1Q07954 4544 aaKnown RBP0.11□□□□□ -2.39
NSMCE4A-210ENST00000483541 URB1O60287 2271 aaKnown RBP0.11□□□□□ -2.39
NSMCE4A-210ENST00000483541 C20orf202A1L168 122 aa0.11□□□□□ -2.39
NSMCE4A-210ENST00000483541 C10orf142B7Z368 130 aa0.11□□□□□ -2.39
NSMCE4A-210ENST00000483541 H3BQ15 152 aa0.11□□□□□ -2.39
NSMCE4A-210ENST00000483541 SNCAP37840 140 aa0.11□□□□□ -2.39
NSMCE4A-210ENST00000483541 UBE2D3P61077 147 aa0.11□□□□□ -2.39
NSMCE4A-210ENST00000483541 UBE2D2P62837 147 aa0.11□□□□□ -2.39
NSMCE4A-210ENST00000483541 TMEM263Q8WUH6 116 aaKnown RBP0.11□□□□□ -2.39
NSMCE4A-210ENST00000483541 C12orf57Q99622 126 aa0.11□□□□□ -2.39
NSMCE4A-210ENST00000483541 PDCD11Q14690 1871 aaKnown RBP0.11□□□□□ -2.39
NSMCE4A-210ENST00000483541 POLA1P09884 1462 aaPredicted RBP0.1□□□□□ -2.39
NSMCE4A-210ENST00000483541 CACNA1AO00555 2505 aa0.1□□□□□ -2.39
NSMCE4A-210ENST00000483541 KRTDAPP60985 99 aa0.1□□□□□ -2.39
NSMCE4A-210ENST00000483541 CSPG4Q6UVK1 2322 aa0.1□□□□□ -2.39
NSMCE4A-210ENST00000483541 NSD3Q9BZ95 1437 aa0.1□□□□□ -2.39
NSMCE4A-210ENST00000483541 MAGI1Q96QZ7 1491 aaPredicted RBP0.1□□□□□ -2.39
NSMCE4A-210ENST00000483541 MACF1Q9UPN3 7388 aaKnown RBP0.09□□□□□ -2.39
NSMCE4A-210ENST00000483541 CSMD3Q7Z407 3707 aa0.09□□□□□ -2.39
NSMCE4A-210ENST00000483541 HSD52Q0P140 79 aa0.09□□□□□ -2.4
NSMCE4A-210ENST00000483541 SFTA2Q6UW10 78 aa0.09□□□□□ -2.4
NSMCE4A-210ENST00000483541 FDCSPQ8NFU4 85 aa0.09□□□□□ -2.4
NSMCE4A-210ENST00000483541 SPRR2GQ9BYE4 73 aa0.09□□□□□ -2.4
NSMCE4A-210ENST00000483541 ANKRD17O75179 2603 aaKnown RBP0.08□□□□□ -2.4
NSMCE4A-210ENST00000483541 A0A1B0GWA3 101 aa0.08□□□□□ -2.4
NSMCE4A-210ENST00000483541 SPRR1AP35321 89 aa0.08□□□□□ -2.4
NSMCE4A-210ENST00000483541 C10orf113Q5VZT2 155 aa0.08□□□□□ -2.4
NSMCE4A-210ENST00000483541 SPRR4Q96PI1 79 aa0.08□□□□□ -2.4
NSMCE4A-210ENST00000483541 PRO1933Q9H354 126 aa0.08□□□□□ -2.4
NSMCE4A-210ENST00000483541 MRC2Q9UBG0 1479 aa0.08□□□□□ -2.4
NSMCE4A-210ENST00000483541 ZFYVE16Q7Z3T8 1539 aa0.08□□□□□ -2.4
NSMCE4A-210ENST00000483541 XRN1Q8IZH2 1706 aaKnown RBP0.07□□□□□ -2.4
NSMCE4A-210ENST00000483541 FAM223BA6NKX1 122 aa0.07□□□□□ -2.4
NSMCE4A-210ENST00000483541 TMEM262E9PQX1 116 aa0.07□□□□□ -2.4
NSMCE4A-210ENST00000483541 SAA2P0DJI9 122 aaPredicted RBP0.07□□□□□ -2.4
NSMCE4A-210ENST00000483541 S100PP25815 95 aa0.07□□□□□ -2.4
NSMCE4A-210ENST00000483541 ADGRL2O95490 1459 aa0.07□□□□□ -2.4
NSMCE4A-210ENST00000483541 VWFP04275 2813 aa0.07□□□□□ -2.4
NSMCE4A-210ENST00000483541 MAP1BP46821 2468 aaKnown RBP0.07□□□□□ -2.4
NSMCE4A-210ENST00000483541 GAPVD1Q14C86 1478 aa0.06□□□□□ -2.4
NSMCE4A-210ENST00000483541 C1orf167Q5SNV9 1468 aa0.06□□□□□ -2.4
NSMCE4A-210ENST00000483541 TRBV7-4A0A0J9YYF1 115 aa0.06□□□□□ -2.4
NSMCE4A-210ENST00000483541 COX6B1P14854 86 aa0.06□□□□□ -2.4
NSMCE4A-210ENST00000483541 TCEAL7Q9BRU2 100 aa0.06□□□□□ -2.4
NSMCE4A-210ENST00000483541 A0A0G2JMZ2 1700 aa0.06□□□□□ -2.4
NSMCE4A-210ENST00000483541 TULP4Q9NRJ4 1543 aa0.06□□□□□ -2.4
NSMCE4A-210ENST00000483541 ZFHX3Q15911 3703 aa0.06□□□□□ -2.4
NSMCE4A-210ENST00000483541 SEC11AP67812 179 aa0.05□□□□□ -2.4
NSMCE4A-210ENST00000483541 LINC01600Q96MT4 127 aa0.05□□□□□ -2.4
NSMCE4A-210ENST00000483541 CGREF1Q99674 301 aa0.05□□□□□ -2.4
NSMCE4A-210ENST00000483541 DNAJC13O75165 2243 aa0.04□□□□□ -2.4
NSMCE4A-210ENST00000483541 hADV29S1A0JD25 119 aa0.04□□□□□ -2.4
NSMCE4A-210ENST00000483541 DEFB123Q8N688 67 aa0.04□□□□□ -2.4
NSMCE4A-210ENST00000483541 SSPOA2VEC9 5147 aa0.04□□□□□ -2.4
NSMCE4A-210ENST00000483541 NSD1Q96L73 2696 aaPredicted RBP0.04□□□□□ -2.4
NSMCE4A-210ENST00000483541 SETBP1Q9Y6X0 1596 aa0.03□□□□□ -2.4
NSMCE4A-210ENST00000483541 KIAA0556O60303 1618 aa0.03□□□□□ -2.4
NSMCE4A-210ENST00000483541 TMEM218A2RU14 115 aa0.03□□□□□ -2.4
NSMCE4A-210ENST00000483541 VAMP8Q9BV40 100 aa0.03□□□□□ -2.4
NSMCE4A-210ENST00000483541 ATRQ13535 2644 aa0.03□□□□□ -2.4
NSMCE4A-210ENST00000483541 ABCC5O15440 1437 aa0.03□□□□□ -2.41
NSMCE4A-210ENST00000483541 WNK1Q9H4A3 2382 aa0.03□□□□□ -2.41
NSMCE4A-210ENST00000483541 FLNAP21333 2647 aaKnown RBP0.02□□□□□ -2.41
NSMCE4A-210ENST00000483541 PKD1L1Q8TDX9 2849 aa0.02□□□□□ -2.41
NSMCE4A-210ENST00000483541 TENM4Q6N022 2769 aa0.02□□□□□ -2.41
NSMCE4A-210ENST00000483541 NLRP1Q9C000 1473 aa0.02□□□□□ -2.41
NSMCE4A-210ENST00000483541 ANKRD36A6QL64 1941 aa0.01□□□□□ -2.41
NSMCE4A-210ENST00000483541 LINC00959A0A1B0GUT2 108 aa0.01□□□□□ -2.41
NSMCE4A-210ENST00000483541 GNGT2O14610 69 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms