RNA–Protein interactions for RNA: ENST00000482843.5

RAPGEF3-210, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,395 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-210ENST00000482843 C20orf203Q8NBC4 194 aa8.76□□□□□ -1.01
RAPGEF3-210ENST00000482843 SMCPP49901 116 aaPredicted RBP8.75□□□□□ -1.01
RAPGEF3-210ENST00000482843 ODF3L2Q3SX64 289 aa8.75□□□□□ -1.01
RAPGEF3-210ENST00000482843 NOP10Q9NPE3 64 aaKnown RBP8.75□□□□□ -1.01
RAPGEF3-210ENST00000482843 VPREB1P12018 145 aa8.74□□□□□ -1.01
RAPGEF3-210ENST00000482843 S100A7L2Q5SY68 101 aa8.74□□□□□ -1.01
RAPGEF3-210ENST00000482843 LINC01006Q8NI28 216 aa8.74□□□□□ -1.01
RAPGEF3-210ENST00000482843 TRAV8-3A0A0A6YYJ7 113 aa8.74□□□□□ -1.01
RAPGEF3-210ENST00000482843 RRN3P1Q2M238 152 aa8.74□□□□□ -1.01
RAPGEF3-210ENST00000482843 ZNF469Q96JG9 3925 aaPredicted RBP8.74□□□□□ -1.01
RAPGEF3-210ENST00000482843 IGLV4-69A0A075B6H9 119 aa8.73□□□□□ -1.01
RAPGEF3-210ENST00000482843 PAX4O43316 350 aa8.73□□□□□ -1.01
RAPGEF3-210ENST00000482843 CFAP126Q5VTH2 177 aa8.73□□□□□ -1.01
RAPGEF3-210ENST00000482843 KRTAP1-3Q8IUG1 177 aa8.73□□□□□ -1.01
RAPGEF3-210ENST00000482843 TIMM17AQ99595 171 aa8.73□□□□□ -1.01
RAPGEF3-210ENST00000482843 FAM240AA0A1B0GVK7 77 aa8.73□□□□□ -1.01
RAPGEF3-210ENST00000482843 APOC4P55056 127 aa8.73□□□□□ -1.01
RAPGEF3-210ENST00000482843 ZNF625Q96I27 306 aaPredicted RBP8.73□□□□□ -1.01
RAPGEF3-210ENST00000482843 TRAV8-4A0A0B4J246 113 aa8.73□□□□□ -1.01
RAPGEF3-210ENST00000482843 TCL1BO95988 128 aa8.73□□□□□ -1.01
RAPGEF3-210ENST00000482843 TSPEAR-AS2P59090 65 aa8.73□□□□□ -1.01
RAPGEF3-210ENST00000482843 Q6ZTI0 123 aa8.73□□□□□ -1.01
RAPGEF3-210ENST00000482843 RHOHQ15669 191 aa8.72□□□□□ -1.01
RAPGEF3-210ENST00000482843 IGLV4-3A0A075B6K6 122 aa8.72□□□□□ -1.01
RAPGEF3-210ENST00000482843 TRBV6-5A0A0K0K1A5 114 aa8.72□□□□□ -1.01
RAPGEF3-210ENST00000482843 PLA2G2AP14555 144 aa8.72□□□□□ -1.01
RAPGEF3-210ENST00000482843 TMEM258P61165 79 aa8.72□□□□□ -1.01
RAPGEF3-210ENST00000482843 SPANXCQ9NY87 97 aa8.72□□□□□ -1.01
RAPGEF3-210ENST00000482843 DEFB130BP0DP73 79 aa8.71□□□□□ -1.02
RAPGEF3-210ENST00000482843 DEFB130AP0DP74 79 aa8.71□□□□□ -1.02
RAPGEF3-210ENST00000482843 TIMM21Q9BVV7 248 aa8.71□□□□□ -1.02
RAPGEF3-210ENST00000482843 LINC00467Q9BRT7 94 aa8.7□□□□□ -1.02
RAPGEF3-210ENST00000482843 SS18Q15532 418 aa8.7□□□□□ -1.02
RAPGEF3-210ENST00000482843 Q8N2B8 174 aa8.69□□□□□ -1.02
RAPGEF3-210ENST00000482843 DAZ2Q13117 558 aaKnown RBP8.69□□□□□ -1.02
RAPGEF3-210ENST00000482843 SERTAD4-AS1Q5TG53 156 aa8.69□□□□□ -1.02
RAPGEF3-210ENST00000482843 DAZ4Q86SG3 579 aaKnown RBP8.69□□□□□ -1.02
RAPGEF3-210ENST00000482843 DAZ3Q9NR90 486 aaKnown RBP8.69□□□□□ -1.02
RAPGEF3-210ENST00000482843 TRBV7-3A0A075B6L6 115 aa8.69□□□□□ -1.02
RAPGEF3-210ENST00000482843 TRGV4A0A0C4DH28 118 aa8.69□□□□□ -1.02
RAPGEF3-210ENST00000482843 A0A0J9YY99 117 aa8.68□□□□□ -1.02
RAPGEF3-210ENST00000482843 ZNF22P17026 224 aaPredicted RBP8.68□□□□□ -1.02
RAPGEF3-210ENST00000482843 RPL36AP83881 106 aaKnown RBP8.68□□□□□ -1.02
RAPGEF3-210ENST00000482843 DAND5Q8N907 189 aa8.68□□□□□ -1.02
RAPGEF3-210ENST00000482843 RPL36ALQ969Q0 106 aaKnown RBP8.68□□□□□ -1.02
RAPGEF3-210ENST00000482843 C1orf158Q8N1D5 194 aa8.68□□□□□ -1.02
RAPGEF3-210ENST00000482843 CYSTM1Q9H1C7 97 aa8.68□□□□□ -1.02
RAPGEF3-210ENST00000482843 UBE2L6O14933 153 aa8.67□□□□□ -1.02
RAPGEF3-210ENST00000482843 COX7CP15954 63 aa8.67□□□□□ -1.02
RAPGEF3-210ENST00000482843 POM121L12Q8N7R1 296 aa8.67□□□□□ -1.02
RAPGEF3-210ENST00000482843 TEP1Q99973 2627 aaKnown RBP8.67□□□□□ -1.02
RAPGEF3-210ENST00000482843 IGHV3-30-3P0DP02 117 aa8.66□□□□□ -1.02
RAPGEF3-210ENST00000482843 PRIMA1Q86XR5 153 aa8.66□□□□□ -1.02
RAPGEF3-210ENST00000482843 PRR26Q8N8Z3 221 aa8.66□□□□□ -1.02
RAPGEF3-210ENST00000482843 NDUFA12Q9UI09 145 aa8.66□□□□□ -1.02
RAPGEF3-210ENST00000482843 TOMM7Q9P0U1 55 aa8.65□□□□□ -1.02
RAPGEF3-210ENST00000482843 A0A096LPF7 62 aa8.65□□□□□ -1.02
RAPGEF3-210ENST00000482843 MUSTN1Q8IVN3 82 aa8.65□□□□□ -1.02
RAPGEF3-210ENST00000482843 C11orf72Q8NBR9 251 aa8.65□□□□□ -1.02
RAPGEF3-210ENST00000482843 LOC100131303A0A0U1RQF7 123 aa8.65□□□□□ -1.03
RAPGEF3-210ENST00000482843 TMEM223A0PJW6 202 aa8.64□□□□□ -1.03
RAPGEF3-210ENST00000482843 LEPROTO15243 131 aa8.64□□□□□ -1.03
RAPGEF3-210ENST00000482843 DEFB4AO15263 64 aa8.64□□□□□ -1.03
RAPGEF3-210ENST00000482843 RBM3P98179 157 aaKnown RBP8.64□□□□□ -1.03
RAPGEF3-210ENST00000482843 SLC25A29Q8N8R3 303 aa8.64□□□□□ -1.03
RAPGEF3-210ENST00000482843 NTN5Q8WTR8 489 aaPredicted RBP8.64□□□□□ -1.03
RAPGEF3-210ENST00000482843 CDKN2A-AS1Q9UH64 79 aa8.64□□□□□ -1.03
RAPGEF3-210ENST00000482843 C11orf68Q9H3H3 251 aaKnown RBP8.63□□□□□ -1.03
RAPGEF3-210ENST00000482843 F8P00451 2351 aa8.63□□□□□ -1.03
RAPGEF3-210ENST00000482843 PRO1854Q9UHT4 67 aa8.62□□□□□ -1.03
RAPGEF3-210ENST00000482843 CRYGAP11844 174 aa8.62□□□□□ -1.03
RAPGEF3-210ENST00000482843 NDUFA11Q86Y39 141 aa8.62□□□□□ -1.03
RAPGEF3-210ENST00000482843 CHCHD7Q9BUK0 85 aa8.62□□□□□ -1.03
RAPGEF3-210ENST00000482843 INAFM1C9JVW0 142 aa8.62□□□□□ -1.03
RAPGEF3-210ENST00000482843 RNASE1P07998 156 aaKnown RBP8.62□□□□□ -1.03
RAPGEF3-210ENST00000482843 UBE2D4Q9Y2X8 147 aa8.62□□□□□ -1.03
RAPGEF3-210ENST00000482843 K7EQD1 137 aa8.61□□□□□ -1.03
RAPGEF3-210ENST00000482843 CFC1BP0CG36 223 aa8.61□□□□□ -1.03
RAPGEF3-210ENST00000482843 CFC1P0CG37 223 aa8.61□□□□□ -1.03
RAPGEF3-210ENST00000482843 TMEM263Q8WUH6 116 aaKnown RBP8.61□□□□□ -1.03
RAPGEF3-210ENST00000482843 A0A0J9YXY3 114 aa8.61□□□□□ -1.03
RAPGEF3-210ENST00000482843 IGHV3-30P01768 117 aa8.61□□□□□ -1.03
RAPGEF3-210ENST00000482843 IGHV3-30-5P0DP03 117 aa8.61□□□□□ -1.03
RAPGEF3-210ENST00000482843 HTN3P15516 51 aa8.61□□□□□ -1.03
RAPGEF3-210ENST00000482843 RBM12B-AS1Q9P1G2 102 aa8.61□□□□□ -1.03
RAPGEF3-210ENST00000482843 LY6G6DO95868 133 aa8.6□□□□□ -1.03
RAPGEF3-210ENST00000482843 HILS1P60008 231 aa8.59□□□□□ -1.03
RAPGEF3-210ENST00000482843 VWFP04275 2813 aa8.59□□□□□ -1.03
RAPGEF3-210ENST00000482843 KRTAP1-1Q07627 177 aa8.59□□□□□ -1.03
RAPGEF3-210ENST00000482843 CLPSL2Q6UWE3 100 aa8.59□□□□□ -1.03
RAPGEF3-210ENST00000482843 Q9H8V8 135 aa8.59□□□□□ -1.03
RAPGEF3-210ENST00000482843 PDZD2O15018 2839 aa8.59□□□□□ -1.03
RAPGEF3-210ENST00000482843 IGHV1-58A0A0C4DH39 117 aa8.58□□□□□ -1.04
RAPGEF3-210ENST00000482843 COX6A2Q02221 97 aa8.58□□□□□ -1.04
RAPGEF3-210ENST00000482843 H3BT86 120 aa8.58□□□□□ -1.04
RAPGEF3-210ENST00000482843 SLC25A20O43772 301 aa8.58□□□□□ -1.04
RAPGEF3-210ENST00000482843 MPLKIPQ8TAP9 179 aa8.58□□□□□ -1.04
RAPGEF3-210ENST00000482843 TMEM243Q9BU79 118 aa8.58□□□□□ -1.04
RAPGEF3-210ENST00000482843 OTOGQ6ZRI0 2925 aa8.57□□□□□ -1.04
RAPGEF3-210ENST00000482843 IGLV1-51P01701 117 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms