RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 EPG5Q9HCE0 2579 aa10.9□□□□□ -0.66
C9orf3-218ENST00000482056 PLAC8L1A1L4L8 177 aa10.9□□□□□ -0.66
C9orf3-218ENST00000482056 COX7A2LO14548 114 aa10.88□□□□□ -0.67
C9orf3-218ENST00000482056 APCP25054 2843 aa10.88□□□□□ -0.67
C9orf3-218ENST00000482056 WFDC10AQ9H1F0 79 aa10.88□□□□□ -0.67
C9orf3-218ENST00000482056 SONP18583 2426 aaKnown RBP10.88□□□□□ -0.67
C9orf3-218ENST00000482056 C19orf73Q9NVV2 129 aa10.87□□□□□ -0.67
C9orf3-218ENST00000482056 AKAP9Q99996 3911 aa10.87□□□□□ -0.67
C9orf3-218ENST00000482056 CSNK1G2-AS1Q8NCQ2 148 aa10.86□□□□□ -0.67
C9orf3-218ENST00000482056 COX7B2Q8TF08 81 aa10.86□□□□□ -0.67
C9orf3-218ENST00000482056 CITED1Q99966 193 aa10.86□□□□□ -0.67
C9orf3-218ENST00000482056 LOC100131303A0A0U1RQF7 123 aa10.86□□□□□ -0.67
C9orf3-218ENST00000482056 GAGE6Q13070 117 aa10.86□□□□□ -0.67
C9orf3-218ENST00000482056 SHISA2Q6UWI4 295 aa10.86□□□□□ -0.67
C9orf3-218ENST00000482056 SOSTDC1Q6X4U4 206 aa10.86□□□□□ -0.67
C9orf3-218ENST00000482056 GAGE2BQ13066 116 aa10.85□□□□□ -0.67
C9orf3-218ENST00000482056 GAGE2EQ4V326 116 aa10.85□□□□□ -0.67
C9orf3-218ENST00000482056 DEFB121Q5J5C9 76 aa10.85□□□□□ -0.67
C9orf3-218ENST00000482056 GAGE2DQ9UEU5 116 aa10.85□□□□□ -0.67
C9orf3-218ENST00000482056 TRBV6-8A0A0A6YYG3 113 aa10.85□□□□□ -0.67
C9orf3-218ENST00000482056 FAM240AA0A1B0GVK7 77 aa10.85□□□□□ -0.67
C9orf3-218ENST00000482056 PF4P02776 101 aa10.85□□□□□ -0.67
C9orf3-218ENST00000482056 MRPL23Q16540 153 aaKnown RBP10.85□□□□□ -0.67
C9orf3-218ENST00000482056 TRAV13-2A0A0B4J235 113 aa10.84□□□□□ -0.67
C9orf3-218ENST00000482056 KRTAP1-1Q07627 177 aa10.84□□□□□ -0.67
C9orf3-218ENST00000482056 FHL2Q14192 279 aa10.84□□□□□ -0.67
C9orf3-218ENST00000482056 CHCHD5Q9BSY4 110 aa10.84□□□□□ -0.67
C9orf3-218ENST00000482056 FLNAP21333 2647 aaKnown RBP10.83□□□□□ -0.68
C9orf3-218ENST00000482056 TRACP01848 142 aa10.83□□□□□ -0.68
C9orf3-218ENST00000482056 FAM222AQ5U5X8 452 aa10.83□□□□□ -0.68
C9orf3-218ENST00000482056 ANAPC13Q9BS18 74 aa10.83□□□□□ -0.68
C9orf3-218ENST00000482056 CRPP02741 224 aa10.82□□□□□ -0.68
C9orf3-218ENST00000482056 Q6Q795 121 aa10.82□□□□□ -0.68
C9orf3-218ENST00000482056 C15orf53Q8NAA6 179 aa10.82□□□□□ -0.68
C9orf3-218ENST00000482056 TOMM7Q9P0U1 55 aa10.82□□□□□ -0.68
C9orf3-218ENST00000482056 IGKV3OR2-268A0A0C4DH90 116 aa10.81□□□□□ -0.68
C9orf3-218ENST00000482056 HILS1P60008 231 aa10.81□□□□□ -0.68
C9orf3-218ENST00000482056 NOTCH3Q9UM47 2321 aa10.8□□□□□ -0.68
C9orf3-218ENST00000482056 HIST2H2BCQ6DN03 193 aa10.79□□□□□ -0.68
C9orf3-218ENST00000482056 MIR7-3HGQ8N6C7 128 aa10.79□□□□□ -0.68
C9orf3-218ENST00000482056 KIR2DL5BQ8NHK3 375 aa10.79□□□□□ -0.68
C9orf3-218ENST00000482056 IGLV4-60A0A075B6I1 120 aa10.79□□□□□ -0.68
C9orf3-218ENST00000482056 ACYP1P07311 99 aa10.79□□□□□ -0.68
C9orf3-218ENST00000482056 LINC00158P58513 81 aa10.79□□□□□ -0.68
C9orf3-218ENST00000482056 TTC32Q5I0X7 151 aa10.79□□□□□ -0.68
C9orf3-218ENST00000482056 CCDC168Q8NDH2 2452 aa10.79□□□□□ -0.68
C9orf3-218ENST00000482056 A0A087WZ39 114 aa10.78□□□□□ -0.68
C9orf3-218ENST00000482056 IGHV3OR16-9A0A0B4J2B5 98 aa10.78□□□□□ -0.68
C9orf3-218ENST00000482056 CRLF1O75462 422 aa10.78□□□□□ -0.68
C9orf3-218ENST00000482056 SND1-IT1Q9HBX3 110 aa10.78□□□□□ -0.68
C9orf3-218ENST00000482056 SETXQ7Z333 2677 aaKnown RBP10.78□□□□□ -0.68
C9orf3-218ENST00000482056 ZNF469Q96JG9 3925 aaPredicted RBP10.77□□□□□ -0.68
C9orf3-218ENST00000482056 IBA57-AS1B1ANH7 110 aa10.77□□□□□ -0.68
C9orf3-218ENST00000482056 RPL28P46779 137 aaKnown RBP10.77□□□□□ -0.68
C9orf3-218ENST00000482056 NF1P21359 2839 aa10.77□□□□□ -0.69
C9orf3-218ENST00000482056 DEFB130BP0DP73 79 aa10.77□□□□□ -0.69
C9orf3-218ENST00000482056 DEFB130AP0DP74 79 aa10.77□□□□□ -0.69
C9orf3-218ENST00000482056 PLA2G2AP14555 144 aa10.77□□□□□ -0.69
C9orf3-218ENST00000482056 JMJD1CQ15652 2540 aa10.76□□□□□ -0.69
C9orf3-218ENST00000482056 TRAV26-1A0A087WT03 109 aa10.76□□□□□ -0.69
C9orf3-218ENST00000482056 BAALC-AS2P0C853 105 aa10.76□□□□□ -0.69
C9orf3-218ENST00000482056 LINC00612Q8N6U2 182 aa10.75□□□□□ -0.69
C9orf3-218ENST00000482056 C2CD3Q4AC94 2353 aa10.75□□□□□ -0.69
C9orf3-218ENST00000482056 LINC00959A0A1B0GUT2 108 aa10.74□□□□□ -0.69
C9orf3-218ENST00000482056 SMIM9A6NGZ8 99 aa10.74□□□□□ -0.69
C9orf3-218ENST00000482056 GYPEP15421 78 aa10.74□□□□□ -0.69
C9orf3-218ENST00000482056 NDUFV3P56181 108 aaKnown RBP10.74□□□□□ -0.69
C9orf3-218ENST00000482056 SS18Q15532 418 aa10.74□□□□□ -0.69
C9orf3-218ENST00000482056 C5orf38Q86SI9 138 aa10.74□□□□□ -0.69
C9orf3-218ENST00000482056 SETD2Q9BYW2 2564 aaPredicted RBP10.73□□□□□ -0.69
C9orf3-218ENST00000482056 LINC00337Q8N6G1 96 aa10.73□□□□□ -0.69
C9orf3-218ENST00000482056 A0A1B0GUV1 79 aa10.72□□□□□ -0.69
C9orf3-218ENST00000482056 INAFM2P0DMQ5 153 aa10.72□□□□□ -0.69
C9orf3-218ENST00000482056 C6orf226Q5I0X4 101 aa10.72□□□□□ -0.69
C9orf3-218ENST00000482056 IGKV2-28A0A075B6P5 120 aa10.72□□□□□ -0.69
C9orf3-218ENST00000482056 H0YGX0 51 aa10.72□□□□□ -0.69
C9orf3-218ENST00000482056 DNAL4O96015 105 aa10.72□□□□□ -0.69
C9orf3-218ENST00000482056 IGKV2D-28P01615 120 aa10.72□□□□□ -0.69
C9orf3-218ENST00000482056 CCL18P55774 89 aa10.72□□□□□ -0.69
C9orf3-218ENST00000482056 LINC00482Q8N8I6 264 aa10.72□□□□□ -0.69
C9orf3-218ENST00000482056 PRO0255Q9UI72 69 aa10.72□□□□□ -0.69
C9orf3-218ENST00000482056 FAM218AQ96MZ4 157 aa10.71□□□□□ -0.69
C9orf3-218ENST00000482056 PFN2P35080 140 aa10.7□□□□□ -0.7
C9orf3-218ENST00000482056 LINC01561Q8N1V8 128 aa10.7□□□□□ -0.7
C9orf3-218ENST00000482056 SMIM11BQ8TCY0 68 aa10.7□□□□□ -0.7
C9orf3-218ENST00000482056 PAX4O43316 350 aa10.69□□□□□ -0.7
C9orf3-218ENST00000482056 MALP21145 153 aa10.69□□□□□ -0.7
C9orf3-218ENST00000482056 Q8IZM0 81 aa10.69□□□□□ -0.7
C9orf3-218ENST00000482056 TRBV7-7A0A0K0K1E9 115 aa10.68□□□□□ -0.7
C9orf3-218ENST00000482056 LYRM9A8MSI8 78 aa10.68□□□□□ -0.7
C9orf3-218ENST00000482056 XCL1P47992 114 aa10.68□□□□□ -0.7
C9orf3-218ENST00000482056 X6R8D5 127 aa10.68□□□□□ -0.7
C9orf3-218ENST00000482056 ACANP16112 2415 aa10.67□□□□□ -0.7
C9orf3-218ENST00000482056 J3QKU1 62 aa10.67□□□□□ -0.7
C9orf3-218ENST00000482056 NHLRC4P0CG21 123 aaPredicted RBP10.67□□□□□ -0.7
C9orf3-218ENST00000482056 ANK3Q12955 4377 aaKnown RBP10.67□□□□□ -0.7
C9orf3-218ENST00000482056 MTORP42345 2549 aa10.67□□□□□ -0.7
C9orf3-218ENST00000482056 OR13C6PQ8NH95 151 aa10.66□□□□□ -0.7
C9orf3-218ENST00000482056 IMUPQ9GZP8 106 aa10.66□□□□□ -0.7
C9orf3-218ENST00000482056 Q9HAA7 133 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms