RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 A0A0J9YXY3 114 aa11.02□□□□□ -0.64
RXRA-202ENST00000481739 K7ERJ3 54 aa11.02□□□□□ -0.64
RXRA-202ENST00000481739 PAX4O43316 350 aa11.02□□□□□ -0.64
RXRA-202ENST00000481739 ATP5G1P05496 136 aa11.02□□□□□ -0.64
RXRA-202ENST00000481739 SPINK8P0C7L1 97 aa11.02□□□□□ -0.64
RXRA-202ENST00000481739 C10orf126Q8N4M7 172 aa11.02□□□□□ -0.64
RXRA-202ENST00000481739 CHCHD5Q9BSY4 110 aa11.02□□□□□ -0.64
RXRA-202ENST00000481739 TRAV13-1A0A0B4J241 112 aa11.02□□□□□ -0.65
RXRA-202ENST00000481739 K7EP34 96 aa11.02□□□□□ -0.65
RXRA-202ENST00000481739 TRAV26-1A0A087WT03 109 aa11.01□□□□□ -0.65
RXRA-202ENST00000481739 TIMM17BO60830 172 aa11.01□□□□□ -0.65
RXRA-202ENST00000481739 RPL24P83731 157 aaKnown RBP11.01□□□□□ -0.65
RXRA-202ENST00000481739 IGLL5B9A064 214 aa11□□□□□ -0.65
RXRA-202ENST00000481739 NDUFA1O15239 70 aa11□□□□□ -0.65
RXRA-202ENST00000481739 KRTAP21-3Q3LHN1 58 aa11□□□□□ -0.65
RXRA-202ENST00000481739 SH2D6Q7Z4S9 175 aa11□□□□□ -0.65
RXRA-202ENST00000481739 MRAPQ8TCY5 172 aa11□□□□□ -0.65
RXRA-202ENST00000481739 A0A1B0GUV1 79 aa11□□□□□ -0.65
RXRA-202ENST00000481739 GAGE6Q13070 117 aa11□□□□□ -0.65
RXRA-202ENST00000481739 SPCS1Q9Y6A9 102 aa11□□□□□ -0.65
RXRA-202ENST00000481739 COX6A2Q02221 97 aa10.99□□□□□ -0.65
RXRA-202ENST00000481739 SPANXDQ9BXN6 97 aa10.99□□□□□ -0.65
RXRA-202ENST00000481739 SPANXCQ9NY87 97 aa10.99□□□□□ -0.65
RXRA-202ENST00000481739 SMIM1B2RUZ4 78 aa10.98□□□□□ -0.65
RXRA-202ENST00000481739 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.98□□□□□ -0.65
RXRA-202ENST00000481739 DNHD1Q96M86 4753 aa10.97□□□□□ -0.65
RXRA-202ENST00000481739 LYRM7Q5U5X0 104 aa10.97□□□□□ -0.65
RXRA-202ENST00000481739 LITAFQ99732 161 aa10.97□□□□□ -0.65
RXRA-202ENST00000481739 F5H768 121 aa10.96□□□□□ -0.65
RXRA-202ENST00000481739 CIRBPQ14011 172 aaKnown RBP10.96□□□□□ -0.65
RXRA-202ENST00000481739 NAA38Q9BRA0 125 aaKnown RBP10.96□□□□□ -0.65
RXRA-202ENST00000481739 IFITM1P13164 125 aa10.95□□□□□ -0.66
RXRA-202ENST00000481739 HERV-K104P63124 156 aa10.95□□□□□ -0.66
RXRA-202ENST00000481739 IGLV4-60A0A075B6I1 120 aa10.95□□□□□ -0.66
RXRA-202ENST00000481739 A0A0B4J2C4 111 aa10.95□□□□□ -0.66
RXRA-202ENST00000481739 MRPL23Q16540 153 aaKnown RBP10.95□□□□□ -0.66
RXRA-202ENST00000481739 MIAQ16674 131 aa10.95□□□□□ -0.66
RXRA-202ENST00000481739 COPS9Q8WXC6 57 aa10.95□□□□□ -0.66
RXRA-202ENST00000481739 SPATA25Q9BR10 227 aa10.95□□□□□ -0.66
RXRA-202ENST00000481739 PGPEP1Q9NXJ5 209 aa10.95□□□□□ -0.66
RXRA-202ENST00000481739 CELA1Q9UNI1 258 aa10.95□□□□□ -0.66
RXRA-202ENST00000481739 APOMO95445 188 aa10.93□□□□□ -0.66
RXRA-202ENST00000481739 CFC1BP0CG36 223 aa10.93□□□□□ -0.66
RXRA-202ENST00000481739 CFC1P0CG37 223 aa10.93□□□□□ -0.66
RXRA-202ENST00000481739 MUSTN1Q8IVN3 82 aa10.93□□□□□ -0.66
RXRA-202ENST00000481739 PRO1854Q9UHT4 67 aa10.93□□□□□ -0.66
RXRA-202ENST00000481739 A4D1N5 150 aa10.93□□□□□ -0.66
RXRA-202ENST00000481739 SFTA2Q6UW10 78 aa10.93□□□□□ -0.66
RXRA-202ENST00000481739 ICOSQ9Y6W8 199 aa10.93□□□□□ -0.66
RXRA-202ENST00000481739 RBX1P62877 108 aa10.92□□□□□ -0.66
RXRA-202ENST00000481739 C11orf68Q9H3H3 251 aaKnown RBP10.92□□□□□ -0.66
RXRA-202ENST00000481739 Q9H8V8 135 aa10.92□□□□□ -0.66
RXRA-202ENST00000481739 IGHV3OR16-9A0A0B4J2B5 98 aa10.91□□□□□ -0.66
RXRA-202ENST00000481739 TMEM262E9PQX1 116 aa10.91□□□□□ -0.66
RXRA-202ENST00000481739 ZNF625Q96I27 306 aaPredicted RBP10.91□□□□□ -0.66
RXRA-202ENST00000481739 PPDPFQ9H3Y8 114 aa10.91□□□□□ -0.66
RXRA-202ENST00000481739 TENM3Q9P273 2699 aa10.91□□□□□ -0.66
RXRA-202ENST00000481739 A0A087WZ39 114 aa10.91□□□□□ -0.66
RXRA-202ENST00000481739 LINC00959A0A1B0GUT2 108 aa10.91□□□□□ -0.66
RXRA-202ENST00000481739 H3BNG1 76 aa10.91□□□□□ -0.66
RXRA-202ENST00000481739 TSPAN13O95857 204 aa10.91□□□□□ -0.66
RXRA-202ENST00000481739 SS18Q15532 418 aa10.91□□□□□ -0.66
RXRA-202ENST00000481739 LINC01561Q8N1V8 128 aa10.91□□□□□ -0.66
RXRA-202ENST00000481739 TM2D3Q9BRN9 247 aa10.91□□□□□ -0.66
RXRA-202ENST00000481739 A0A0J9YWU9 116 aa10.9□□□□□ -0.66
RXRA-202ENST00000481739 PRSS2P07478 247 aa10.9□□□□□ -0.66
RXRA-202ENST00000481739 HTN3P15516 51 aa10.89□□□□□ -0.67
RXRA-202ENST00000481739 ADAMTSL4-AS1Q5T5F5 129 aa10.88□□□□□ -0.67
RXRA-202ENST00000481739 LELP1Q5T871 98 aa10.88□□□□□ -0.67
RXRA-202ENST00000481739 COX7B2Q8TF08 81 aa10.88□□□□□ -0.67
RXRA-202ENST00000481739 A0A096LPF7 62 aa10.87□□□□□ -0.67
RXRA-202ENST00000481739 IGKV3OR2-268A0A0C4DH90 116 aa10.87□□□□□ -0.67
RXRA-202ENST00000481739 TRBV20-1A0A075B6N2 111 aa10.86□□□□□ -0.67
RXRA-202ENST00000481739 ERG28Q9UKR5 140 aa10.86□□□□□ -0.67
RXRA-202ENST00000481739 HUWE1Q7Z6Z7 4374 aaKnown RBP10.86□□□□□ -0.67
RXRA-202ENST00000481739 F8W1H4 67 aa10.86□□□□□ -0.67
RXRA-202ENST00000481739 IGHV3-33P01772 117 aa10.86□□□□□ -0.67
RXRA-202ENST00000481739 MEIG1Q5JSS6 88 aa10.85□□□□□ -0.67
RXRA-202ENST00000481739 C11orf45Q8TAV5 145 aa10.84□□□□□ -0.67
RXRA-202ENST00000481739 B9D2Q9BPU9 175 aa10.84□□□□□ -0.67
RXRA-202ENST00000481739 LOC107984156A0A0G2JMH3 177 aa10.84□□□□□ -0.67
RXRA-202ENST00000481739 ARL17AQ8IVW1 177 aa10.84□□□□□ -0.67
RXRA-202ENST00000481739 DNAH9Q9NYC9 4486 aa10.83□□□□□ -0.68
RXRA-202ENST00000481739 NANOS2P60321 138 aaKnown RBP10.83□□□□□ -0.68
RXRA-202ENST00000481739 LINC00308Q8TCZ7 52 aa10.83□□□□□ -0.68
RXRA-202ENST00000481739 CD164L2Q6UWJ8 174 aa10.82□□□□□ -0.68
RXRA-202ENST00000481739 Q6ZTC4 211 aa10.82□□□□□ -0.68
RXRA-202ENST00000481739 ANGP03950 147 aaKnown RBP10.81□□□□□ -0.68
RXRA-202ENST00000481739 H3BMG7 143 aa10.81□□□□□ -0.68
RXRA-202ENST00000481739 K7ERU9 68 aa10.81□□□□□ -0.68
RXRA-202ENST00000481739 EIF4EBP3O60516 100 aaPredicted RBP10.81□□□□□ -0.68
RXRA-202ENST00000481739 XCL1P47992 114 aa10.81□□□□□ -0.68
RXRA-202ENST00000481739 REG3AQ06141 175 aa10.81□□□□□ -0.68
RXRA-202ENST00000481739 C5orf38Q86SI9 138 aa10.81□□□□□ -0.68
RXRA-202ENST00000481739 Q8IZM0 81 aa10.81□□□□□ -0.68
RXRA-202ENST00000481739 LINC00269Q8N2A0 174 aa10.81□□□□□ -0.68
RXRA-202ENST00000481739 TOMM7Q9P0U1 55 aa10.81□□□□□ -0.68
RXRA-202ENST00000481739 TRBV30A0A0K0K1B3 111 aa10.8□□□□□ -0.68
RXRA-202ENST00000481739 IBA57-AS1B1ANH7 110 aa10.8□□□□□ -0.68
RXRA-202ENST00000481739 OCIAD2Q56VL3 154 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms