RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 SVBPQ8N300 66 aa1.84□□□□□ -2.11
COPA-203ENST00000481040 TTC9CQ8N5M4 171 aa1.84□□□□□ -2.11
COPA-203ENST00000481040 COL6A6A6NMZ7 2263 aa1.84□□□□□ -2.12
COPA-203ENST00000481040 PLXNC1O60486 1568 aa1.84□□□□□ -2.12
COPA-203ENST00000481040 PARP14Q460N5 1801 aa1.84□□□□□ -2.12
COPA-203ENST00000481040 PHIPQ8WWQ0 1821 aa1.84□□□□□ -2.12
COPA-203ENST00000481040 CEP250Q9BV73 2442 aa1.83□□□□□ -2.12
COPA-203ENST00000481040 HFM1A2PYH4 1435 aa1.83□□□□□ -2.12
COPA-203ENST00000481040 SCAPERQ9BY12 1400 aa1.83□□□□□ -2.12
COPA-203ENST00000481040 KIAA1551Q9HCM1 1747 aa1.83□□□□□ -2.12
COPA-203ENST00000481040 DUOX2Q9NRD8 1548 aa1.83□□□□□ -2.12
COPA-203ENST00000481040 SBF2Q86WG5 1849 aa1.83□□□□□ -2.12
COPA-203ENST00000481040 HCG22E2RYF7 251 aa1.83□□□□□ -2.12
COPA-203ENST00000481040 CCL3L1P16619 93 aa1.83□□□□□ -2.12
COPA-203ENST00000481040 KLKP1Q107X0 134 aa1.83□□□□□ -2.12
COPA-203ENST00000481040 ZNF818PQ6ZRF7 136 aa1.83□□□□□ -2.12
COPA-203ENST00000481040 PPP1R1CQ8WVI7 109 aa1.83□□□□□ -2.12
COPA-203ENST00000481040 BET1LQ9NYM9 111 aa1.83□□□□□ -2.12
COPA-203ENST00000481040 CSMD1Q96PZ7 3565 aa1.83□□□□□ -2.12
COPA-203ENST00000481040 PATJQ8NI35 1801 aa1.82□□□□□ -2.12
COPA-203ENST00000481040 TLN1Q9Y490 2541 aaKnown RBP1.82□□□□□ -2.12
COPA-203ENST00000481040 UGGT2Q9NYU1 1516 aa1.82□□□□□ -2.12
COPA-203ENST00000481040 IQGAP2Q13576 1575 aa1.82□□□□□ -2.12
COPA-203ENST00000481040 TRAV13-2A0A0B4J235 113 aa1.82□□□□□ -2.12
COPA-203ENST00000481040 COL5A1-AS1Q5SY13 56 aa1.82□□□□□ -2.12
COPA-203ENST00000481040 C10orf99Q6UWK7 81 aa1.82□□□□□ -2.12
COPA-203ENST00000481040 C5orf38Q86SI9 138 aa1.82□□□□□ -2.12
COPA-203ENST00000481040 C4orf33Q8N1A6 199 aa1.82□□□□□ -2.12
COPA-203ENST00000481040 ITPR1Q14643 2758 aa1.82□□□□□ -2.12
COPA-203ENST00000481040 GVINP1Q7Z2Y8 2422 aa1.82□□□□□ -2.12
COPA-203ENST00000481040 FREM2Q5SZK8 3169 aa1.82□□□□□ -2.12
COPA-203ENST00000481040 LRRIQ1Q96JM4 1722 aa1.82□□□□□ -2.12
COPA-203ENST00000481040 CPSF1Q10570 1443 aaKnown RBP1.82□□□□□ -2.12
COPA-203ENST00000481040 CASKIN1Q8WXD9 1431 aa1.82□□□□□ -2.12
COPA-203ENST00000481040 JMJD1CQ15652 2540 aa1.81□□□□□ -2.12
COPA-203ENST00000481040 ARAP2Q8WZ64 1704 aa1.81□□□□□ -2.12
COPA-203ENST00000481040 SCN11AQ9UI33 1791 aa1.81□□□□□ -2.12
COPA-203ENST00000481040 A0A1W2PPM0 123 aa1.81□□□□□ -2.12
COPA-203ENST00000481040 ELOF1P60002 83 aaKnown RBP1.81□□□□□ -2.12
COPA-203ENST00000481040 SSBP1Q04837 148 aaKnown RBP1.81□□□□□ -2.12
COPA-203ENST00000481040 MYH8P13535 1937 aa1.81□□□□□ -2.12
COPA-203ENST00000481040 SYCP2Q9BX26 1530 aa1.81□□□□□ -2.12
COPA-203ENST00000481040 PTPRZ1P23471 2315 aaPredicted RBP1.8□□□□□ -2.12
COPA-203ENST00000481040 SPTA1P02549 2419 aa1.8□□□□□ -2.12
COPA-203ENST00000481040 IGSF10Q6WRI0 2623 aa1.8□□□□□ -2.12
COPA-203ENST00000481040 FAM24AA6NFZ4 105 aa1.8□□□□□ -2.12
COPA-203ENST00000481040 TMEM262E9PQX1 116 aa1.8□□□□□ -2.12
COPA-203ENST00000481040 SIX6O95475 246 aa1.8□□□□□ -2.12
COPA-203ENST00000481040 COX7B2Q8TF08 81 aa1.8□□□□□ -2.12
COPA-203ENST00000481040 AQP10Q96PS8 301 aa1.8□□□□□ -2.12
COPA-203ENST00000481040 BIRC6Q9NR09 4857 aa1.8□□□□□ -2.12
COPA-203ENST00000481040 NBPF19A0A087WUL8 3843 aa1.8□□□□□ -2.12
COPA-203ENST00000481040 MYO5CQ9NQX4 1742 aa1.8□□□□□ -2.12
COPA-203ENST00000481040 ARFGEF1Q9Y6D6 1849 aa1.8□□□□□ -2.12
COPA-203ENST00000481040 CCDC168Q8NDH2 2452 aa1.79□□□□□ -2.12
COPA-203ENST00000481040 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.79□□□□□ -2.12
COPA-203ENST00000481040 CLPSL1A2RUU4 121 aa1.79□□□□□ -2.12
COPA-203ENST00000481040 RBAKDNA6NC62 111 aa1.79□□□□□ -2.12
COPA-203ENST00000481040 DPH3P1Q9H4G8 78 aa1.79□□□□□ -2.12
COPA-203ENST00000481040 TMEM14BQ9NUH8 114 aa1.79□□□□□ -2.12
COPA-203ENST00000481040 LINC00312Q9Y6C7 94 aa1.79□□□□□ -2.12
COPA-203ENST00000481040 CCDC18Q5T9S5 1454 aa1.79□□□□□ -2.12
COPA-203ENST00000481040 TIAM2Q8IVF5 1701 aa1.79□□□□□ -2.12
COPA-203ENST00000481040 NBEAL2Q6ZNJ1 2754 aa1.79□□□□□ -2.12
COPA-203ENST00000481040 NOTCH1P46531 2555 aa1.78□□□□□ -2.12
COPA-203ENST00000481040 FAM186AA6NE01 2351 aa1.78□□□□□ -2.12
COPA-203ENST00000481040 ROS1P08922 2347 aa1.78□□□□□ -2.12
COPA-203ENST00000481040 CNTRLQ7Z7A1 2325 aa1.78□□□□□ -2.12
COPA-203ENST00000481040 DOCK1Q14185 1865 aa1.78□□□□□ -2.12
COPA-203ENST00000481040 RYR1P21817 5038 aa1.78□□□□□ -2.12
COPA-203ENST00000481040 CLTCL1P53675 1640 aa1.78□□□□□ -2.12
COPA-203ENST00000481040 ERVK-7P63135 1459 aa1.78□□□□□ -2.12
COPA-203ENST00000481040 PXDNQ92626 1479 aa1.78□□□□□ -2.12
COPA-203ENST00000481040 TRBV7-1A0A0A6YYK4 115 aa1.78□□□□□ -2.12
COPA-203ENST00000481040 FAM74A4Q5TZK3 123 aa1.78□□□□□ -2.12
COPA-203ENST00000481040 NBEAL1Q6ZS30 2694 aa1.78□□□□□ -2.12
COPA-203ENST00000481040 RIF1Q5UIP0 2472 aaKnown RBP1.78□□□□□ -2.12
COPA-203ENST00000481040 PCNX1Q96RV3 2341 aa1.78□□□□□ -2.13
COPA-203ENST00000481040 ITSN1Q15811 1721 aa1.77□□□□□ -2.13
COPA-203ENST00000481040 KMT2CQ8NEZ4 4911 aaKnown RBP1.77□□□□□ -2.13
COPA-203ENST00000481040 ADGRL2O95490 1459 aa1.77□□□□□ -2.13
COPA-203ENST00000481040 SSSCA1O60232 199 aa1.77□□□□□ -2.13
COPA-203ENST00000481040 ARL14EPLP0DKL9 152 aa1.77□□□□□ -2.13
COPA-203ENST00000481040 KRTAP21-2Q3LI59 83 aa1.77□□□□□ -2.13
COPA-203ENST00000481040 COMMD6Q7Z4G1 85 aa1.77□□□□□ -2.13
COPA-203ENST00000481040 ATRQ13535 2644 aa1.77□□□□□ -2.13
COPA-203ENST00000481040 COL12A1Q99715 3063 aa1.77□□□□□ -2.13
COPA-203ENST00000481040 SSC5DA1L4H1 1573 aa1.76□□□□□ -2.13
COPA-203ENST00000481040 TRPM2O94759 1503 aa1.76□□□□□ -2.13
COPA-203ENST00000481040 RRBP1Q9P2E9 1410 aaKnown RBP1.76□□□□□ -2.13
COPA-203ENST00000481040 LAMA5O15230 3695 aa1.76□□□□□ -2.13
COPA-203ENST00000481040 HYDINQ4G0P3 5121 aa1.76□□□□□ -2.13
COPA-203ENST00000481040 A0A087WTM6 91 aa1.76□□□□□ -2.13
COPA-203ENST00000481040 UBE2L5PA0A1B0GUS4 154 aa1.76□□□□□ -2.13
COPA-203ENST00000481040 UBE2L3P68036 154 aaKnown RBP1.76□□□□□ -2.13
COPA-203ENST00000481040 PARP4Q9UKK3 1724 aaKnown RBP1.76□□□□□ -2.13
COPA-203ENST00000481040 COL4A6Q14031 1691 aa1.76□□□□□ -2.13
COPA-203ENST00000481040 STAB1Q9NY15 2570 aa1.76□□□□□ -2.13
COPA-203ENST00000481040 TRIOO75962 3097 aa1.75□□□□□ -2.13
COPA-203ENST00000481040 MED13LQ71F56 2210 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms