RNA–Protein interactions for RNA: ENST00000480227.5

PKD1-213, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 1 (best)

Gene PKD1, Length 2,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-213ENST00000480227 TRBV30A0A0K0K1B3 111 aa12.14□□□□□ -0.47
PKD1-213ENST00000480227 UBE2L6O14933 153 aa12.14□□□□□ -0.47
PKD1-213ENST00000480227 FAM110AQ9BQ89 295 aa12.14□□□□□ -0.47
PKD1-213ENST00000480227 CSDC2Q9Y534 153 aaKnown RBP12.14□□□□□ -0.47
PKD1-213ENST00000480227 ICOSQ9Y6W8 199 aa12.14□□□□□ -0.47
PKD1-213ENST00000480227 IGLV5-39A0A0G2JS06 123 aa12.13□□□□□ -0.47
PKD1-213ENST00000480227 SMIM1B2RUZ4 78 aa12.13□□□□□ -0.47
PKD1-213ENST00000480227 TRGV4A0A0C4DH28 118 aa12.12□□□□□ -0.47
PKD1-213ENST00000480227 TIMM17BO60830 172 aa12.12□□□□□ -0.47
PKD1-213ENST00000480227 CIRBPQ14011 172 aaKnown RBP12.12□□□□□ -0.47
PKD1-213ENST00000480227 TMEM243Q9BU79 118 aa12.12□□□□□ -0.47
PKD1-213ENST00000480227 CDIP1Q9H305 208 aa12.12□□□□□ -0.47
PKD1-213ENST00000480227 TENM1Q9UKZ4 2725 aa12.12□□□□□ -0.47
PKD1-213ENST00000480227 LINC01620Q4KN68 170 aa12.12□□□□□ -0.47
PKD1-213ENST00000480227 IFITM1P13164 125 aa12.1□□□□□ -0.47
PKD1-213ENST00000480227 RPL13AP40429 203 aaKnown RBP12.1□□□□□ -0.47
PKD1-213ENST00000480227 OVOL2Q9BRP0 275 aa12.1□□□□□ -0.47
PKD1-213ENST00000480227 NSD1Q96L73 2696 aaPredicted RBP12.1□□□□□ -0.47
PKD1-213ENST00000480227 IGKV3OR2-268A0A0C4DH90 116 aa12.1□□□□□ -0.47
PKD1-213ENST00000480227 FAM19A3Q7Z5A8 133 aa12.1□□□□□ -0.47
PKD1-213ENST00000480227 PRIMA1Q86XR5 153 aa12.1□□□□□ -0.47
PKD1-213ENST00000480227 PF4P02776 101 aa12.09□□□□□ -0.47
PKD1-213ENST00000480227 LINC00308Q8TCZ7 52 aa12.09□□□□□ -0.47
PKD1-213ENST00000480227 CLEC2BQ92478 149 aa12.09□□□□□ -0.47
PKD1-213ENST00000480227 TRBV6-4A0A1B0GX49 114 aa12.08□□□□□ -0.47
PKD1-213ENST00000480227 F5H768 121 aa12.08□□□□□ -0.47
PKD1-213ENST00000480227 COX6CP09669 75 aa12.08□□□□□ -0.48
PKD1-213ENST00000480227 GAGE6Q13070 117 aa12.08□□□□□ -0.48
PKD1-213ENST00000480227 MEIG1Q5JSS6 88 aa12.08□□□□□ -0.48
PKD1-213ENST00000480227 SPATA3Q8NHX4 192 aa12.07□□□□□ -0.48
PKD1-213ENST00000480227 RNF183Q96D59 192 aa12.07□□□□□ -0.48
PKD1-213ENST00000480227 TRRAPQ9Y4A5 3859 aa12.07□□□□□ -0.48
PKD1-213ENST00000480227 LY6G6DO95868 133 aa12.07□□□□□ -0.48
PKD1-213ENST00000480227 FHL2Q14192 279 aa12.07□□□□□ -0.48
PKD1-213ENST00000480227 NTN5Q8WTR8 489 aaPredicted RBP12.07□□□□□ -0.48
PKD1-213ENST00000480227 DEFB130BP0DP73 79 aa12.06□□□□□ -0.48
PKD1-213ENST00000480227 DEFB130AP0DP74 79 aa12.06□□□□□ -0.48
PKD1-213ENST00000480227 SCGB1A1P11684 91 aa12.06□□□□□ -0.48
PKD1-213ENST00000480227 LINC00482Q8N8I6 264 aa12.06□□□□□ -0.48
PKD1-213ENST00000480227 MT-ATP8P03928 68 aa12.05□□□□□ -0.48
PKD1-213ENST00000480227 SOSTDC1Q6X4U4 206 aa12.05□□□□□ -0.48
PKD1-213ENST00000480227 TRBV10-2A0A0K0K1G8 114 aa12.05□□□□□ -0.48
PKD1-213ENST00000480227 M0QXV9 152 aa12.05□□□□□ -0.48
PKD1-213ENST00000480227 CRLF1O75462 422 aa12.05□□□□□ -0.48
PKD1-213ENST00000480227 XGP55808 180 aa12.05□□□□□ -0.48
PKD1-213ENST00000480227 BAHCC1Q9P281 2608 aa12.04□□□□□ -0.48
PKD1-213ENST00000480227 TEX49A0A1B0GTD5 131 aa12.04□□□□□ -0.48
PKD1-213ENST00000480227 ATRQ13535 2644 aa12.04□□□□□ -0.48
PKD1-213ENST00000480227 IGLV4-60A0A075B6I1 120 aa12.04□□□□□ -0.48
PKD1-213ENST00000480227 CHCHD5Q9BSY4 110 aa12.04□□□□□ -0.48
PKD1-213ENST00000480227 H7C423 109 aa12.03□□□□□ -0.48
PKD1-213ENST00000480227 TRBV6-8A0A0A6YYG3 113 aa12.03□□□□□ -0.48
PKD1-213ENST00000480227 C2orf82Q6UX34 121 aa12.03□□□□□ -0.48
PKD1-213ENST00000480227 CIDEAO60543 219 aa12.02□□□□□ -0.49
PKD1-213ENST00000480227 TOMM7Q9P0U1 55 aa12.02□□□□□ -0.49
PKD1-213ENST00000480227 LST1O00453 97 aa12□□□□□ -0.49
PKD1-213ENST00000480227 INAFM1C9JVW0 142 aa12□□□□□ -0.49
PKD1-213ENST00000480227 HERV-K104P63124 156 aa12□□□□□ -0.49
PKD1-213ENST00000480227 HIVEP1P15822 2718 aa12□□□□□ -0.49
PKD1-213ENST00000480227 COX7B2Q8TF08 81 aa11.98□□□□□ -0.49
PKD1-213ENST00000480227 COPS9Q8WXC6 57 aa11.98□□□□□ -0.49
PKD1-213ENST00000480227 TMEM262E9PQX1 116 aa11.98□□□□□ -0.49
PKD1-213ENST00000480227 UBE2WQ96B02 151 aa11.98□□□□□ -0.49
PKD1-213ENST00000480227 X6R8D5 127 aa11.98□□□□□ -0.49
PKD1-213ENST00000480227 TEP1Q99973 2627 aaKnown RBP11.97□□□□□ -0.49
PKD1-213ENST00000480227 GYPEP15421 78 aa11.96□□□□□ -0.49
PKD1-213ENST00000480227 KIR2DL5BQ8NHK3 375 aa11.96□□□□□ -0.49
PKD1-213ENST00000480227 LINC01600Q96MT4 127 aa11.96□□□□□ -0.49
PKD1-213ENST00000480227 C5orf38Q86SI9 138 aa11.96□□□□□ -0.5
PKD1-213ENST00000480227 A0A096LPF7 62 aa11.95□□□□□ -0.5
PKD1-213ENST00000480227 H3BT86 120 aa11.95□□□□□ -0.5
PKD1-213ENST00000480227 IGHV3OR16-9A0A0B4J2B5 98 aa11.94□□□□□ -0.5
PKD1-213ENST00000480227 DEFB4AO15263 64 aa11.94□□□□□ -0.5
PKD1-213ENST00000480227 MIR7-3HGQ8N6C7 128 aa11.94□□□□□ -0.5
PKD1-213ENST00000480227 LINC00612Q8N6U2 182 aa11.94□□□□□ -0.5
PKD1-213ENST00000480227 SHISA2Q6UWI4 295 aa11.93□□□□□ -0.5
PKD1-213ENST00000480227 COX7A2LO14548 114 aa11.93□□□□□ -0.5
PKD1-213ENST00000480227 TRAV8-4A0A0B4J246 113 aa11.92□□□□□ -0.5
PKD1-213ENST00000480227 LINC00158P58513 81 aa11.92□□□□□ -0.5
PKD1-213ENST00000480227 DEFB135Q30KP9 77 aa11.92□□□□□ -0.5
PKD1-213ENST00000480227 FAM222AQ5U5X8 452 aa11.92□□□□□ -0.5
PKD1-213ENST00000480227 CKS1BP61024 79 aa11.91□□□□□ -0.5
PKD1-213ENST00000480227 A0A087WZ39 114 aa11.91□□□□□ -0.5
PKD1-213ENST00000480227 LINC00959A0A1B0GUT2 108 aa11.91□□□□□ -0.5
PKD1-213ENST00000480227 CLPSL2Q6UWE3 100 aa11.91□□□□□ -0.5
PKD1-213ENST00000480227 C11orf68Q9H3H3 251 aaKnown RBP11.91□□□□□ -0.5
PKD1-213ENST00000480227 C9orf66Q5T8R8 295 aa11.9□□□□□ -0.5
PKD1-213ENST00000480227 A0A1B0GV72 72 aa11.9□□□□□ -0.51
PKD1-213ENST00000480227 PFN2P35080 140 aa11.9□□□□□ -0.51
PKD1-213ENST00000480227 XCL1P47992 114 aa11.9□□□□□ -0.51
PKD1-213ENST00000480227 SVIPQ8NHG7 77 aa11.9□□□□□ -0.51
PKD1-213ENST00000480227 SND1-IT1Q9HBX3 110 aa11.89□□□□□ -0.51
PKD1-213ENST00000480227 PRO0255Q9UI72 69 aa11.89□□□□□ -0.51
PKD1-213ENST00000480227 LINC00337Q8N6G1 96 aa11.88□□□□□ -0.51
PKD1-213ENST00000480227 SMIM9A6NGZ8 99 aa11.87□□□□□ -0.51
PKD1-213ENST00000480227 CRPP02741 224 aa11.87□□□□□ -0.51
PKD1-213ENST00000480227 IGKV2-28A0A075B6P5 120 aa11.87□□□□□ -0.51
PKD1-213ENST00000480227 IGKV2D-28P01615 120 aa11.87□□□□□ -0.51
PKD1-213ENST00000480227 FAM218AQ96MZ4 157 aa11.87□□□□□ -0.51
PKD1-213ENST00000480227 TRAV13-2A0A0B4J235 113 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms