RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 SOSTDC1Q6X4U4 206 aa17.43■□□□□ 0.38
SYNGAP1-206ENST00000479510 SNCGO76070 127 aa17.42■□□□□ 0.38
SYNGAP1-206ENST00000479510 MRPL23Q16540 153 aaKnown RBP17.42■□□□□ 0.38
SYNGAP1-206ENST00000479510 CENPEQ02224 2701 aa17.41■□□□□ 0.38
SYNGAP1-206ENST00000479510 Q6Q795 121 aa17.4■□□□□ 0.38
SYNGAP1-206ENST00000479510 TRGV4A0A0C4DH28 118 aa17.4■□□□□ 0.38
SYNGAP1-206ENST00000479510 PF4P02776 101 aa17.4■□□□□ 0.38
SYNGAP1-206ENST00000479510 RPL35AP18077 110 aaKnown RBP17.38■□□□□ 0.37
SYNGAP1-206ENST00000479510 KRTAP1-1Q07627 177 aa17.38■□□□□ 0.37
SYNGAP1-206ENST00000479510 FAM222AQ5U5X8 452 aa17.37■□□□□ 0.37
SYNGAP1-206ENST00000479510 TRACP01848 142 aa17.36■□□□□ 0.37
SYNGAP1-206ENST00000479510 GAGE2BQ13066 116 aa17.36■□□□□ 0.37
SYNGAP1-206ENST00000479510 GAGE2EQ4V326 116 aa17.36■□□□□ 0.37
SYNGAP1-206ENST00000479510 COX7B2Q8TF08 81 aa17.36■□□□□ 0.37
SYNGAP1-206ENST00000479510 GAGE2DQ9UEU5 116 aa17.36■□□□□ 0.37
SYNGAP1-206ENST00000479510 A0A0U1RRA0 63 aa17.36■□□□□ 0.37
SYNGAP1-206ENST00000479510 TRBV6-8A0A0A6YYG3 113 aa17.35■□□□□ 0.37
SYNGAP1-206ENST00000479510 FHL2Q14192 279 aa17.35■□□□□ 0.37
SYNGAP1-206ENST00000479510 WFDC10AQ9H1F0 79 aa17.35■□□□□ 0.37
SYNGAP1-206ENST00000479510 LOC100131303A0A0U1RQF7 123 aa17.35■□□□□ 0.37
SYNGAP1-206ENST00000479510 TRAV13-2A0A0B4J235 113 aa17.34■□□□□ 0.37
SYNGAP1-206ENST00000479510 CHD6Q8TD26 2715 aa17.34■□□□□ 0.37
SYNGAP1-206ENST00000479510 ITPR3Q14573 2671 aa17.33■□□□□ 0.36
SYNGAP1-206ENST00000479510 GAGE6Q13070 117 aa17.32■□□□□ 0.36
SYNGAP1-206ENST00000479510 C15orf53Q8NAA6 179 aa17.31■□□□□ 0.36
SYNGAP1-206ENST00000479510 APCP25054 2843 aa17.3■□□□□ 0.36
SYNGAP1-206ENST00000479510 AKAP9Q99996 3911 aa17.3■□□□□ 0.36
SYNGAP1-206ENST00000479510 ACYP1P07311 99 aa17.3■□□□□ 0.36
SYNGAP1-206ENST00000479510 HIST2H2BCQ6DN03 193 aa17.3■□□□□ 0.36
SYNGAP1-206ENST00000479510 ANAPC13Q9BS18 74 aa17.3■□□□□ 0.36
SYNGAP1-206ENST00000479510 IGHV3OR16-9A0A0B4J2B5 98 aa17.3■□□□□ 0.36
SYNGAP1-206ENST00000479510 KIR2DL5BQ8NHK3 375 aa17.3■□□□□ 0.36
SYNGAP1-206ENST00000479510 KMT2BQ9UMN6 2715 aaPredicted RBP17.3■□□□□ 0.36
SYNGAP1-206ENST00000479510 CRLF1O75462 422 aa17.28■□□□□ 0.36
SYNGAP1-206ENST00000479510 RPL28P46779 137 aaKnown RBP17.28■□□□□ 0.36
SYNGAP1-206ENST00000479510 TLN2Q9Y4G6 2542 aa17.28■□□□□ 0.36
SYNGAP1-206ENST00000479510 WNK1Q9H4A3 2382 aa17.28■□□□□ 0.36
SYNGAP1-206ENST00000479510 A0A087WZ39 114 aa17.28■□□□□ 0.36
SYNGAP1-206ENST00000479510 HILS1P60008 231 aa17.28■□□□□ 0.36
SYNGAP1-206ENST00000479510 LINC00612Q8N6U2 182 aa17.28■□□□□ 0.36
SYNGAP1-206ENST00000479510 CHCHD5Q9BSY4 110 aa17.28■□□□□ 0.36
SYNGAP1-206ENST00000479510 IGLV4-60A0A075B6I1 120 aa17.27■□□□□ 0.35
SYNGAP1-206ENST00000479510 IBA57-AS1B1ANH7 110 aa17.27■□□□□ 0.35
SYNGAP1-206ENST00000479510 CRPP02741 224 aa17.27■□□□□ 0.35
SYNGAP1-206ENST00000479510 MIR7-3HGQ8N6C7 128 aa17.25■□□□□ 0.35
SYNGAP1-206ENST00000479510 TRAV26-1A0A087WT03 109 aa17.25■□□□□ 0.35
SYNGAP1-206ENST00000479510 SONP18583 2426 aaKnown RBP17.24■□□□□ 0.35
SYNGAP1-206ENST00000479510 SND1-IT1Q9HBX3 110 aa17.24■□□□□ 0.35
SYNGAP1-206ENST00000479510 NDUFV3P56181 108 aaKnown RBP17.24■□□□□ 0.35
SYNGAP1-206ENST00000479510 TTC32Q5I0X7 151 aa17.22■□□□□ 0.35
SYNGAP1-206ENST00000479510 TOMM7Q9P0U1 55 aa17.22■□□□□ 0.35
SYNGAP1-206ENST00000479510 BAALC-AS2P0C853 105 aa17.21■□□□□ 0.35
SYNGAP1-206ENST00000479510 LINC00959A0A1B0GUT2 108 aa17.2■□□□□ 0.34
SYNGAP1-206ENST00000479510 SMIM9A6NGZ8 99 aa17.2■□□□□ 0.34
SYNGAP1-206ENST00000479510 PLA2G2AP14555 144 aa17.2■□□□□ 0.34
SYNGAP1-206ENST00000479510 LINC00158P58513 81 aa17.2■□□□□ 0.34
SYNGAP1-206ENST00000479510 LINC00337Q8N6G1 96 aa17.2■□□□□ 0.34
SYNGAP1-206ENST00000479510 IGKV2-28A0A075B6P5 120 aa17.19■□□□□ 0.34
SYNGAP1-206ENST00000479510 A0A1B0GUV1 79 aa17.19■□□□□ 0.34
SYNGAP1-206ENST00000479510 IGKV2D-28P01615 120 aa17.19■□□□□ 0.34
SYNGAP1-206ENST00000479510 IGKV3OR2-268A0A0C4DH90 116 aa17.19■□□□□ 0.34
SYNGAP1-206ENST00000479510 LINC01561Q8N1V8 128 aa17.19■□□□□ 0.34
SYNGAP1-206ENST00000479510 TRBV7-7A0A0K0K1E9 115 aa17.17■□□□□ 0.34
SYNGAP1-206ENST00000479510 NHLRC4P0CG21 123 aaPredicted RBP17.17■□□□□ 0.34
SYNGAP1-206ENST00000479510 FAM218AQ96MZ4 157 aa17.17■□□□□ 0.34
SYNGAP1-206ENST00000479510 J3QKU1 62 aa17.17■□□□□ 0.34
SYNGAP1-206ENST00000479510 CCL18P55774 89 aa17.17■□□□□ 0.34
SYNGAP1-206ENST00000479510 FLNAP21333 2647 aaKnown RBP17.16■□□□□ 0.34
SYNGAP1-206ENST00000479510 H0YGX0 51 aa17.16■□□□□ 0.34
SYNGAP1-206ENST00000479510 ZNF469Q96JG9 3925 aaPredicted RBP17.16■□□□□ 0.34
SYNGAP1-206ENST00000479510 INAFM2P0DMQ5 153 aa17.16■□□□□ 0.34
SYNGAP1-206ENST00000479510 DEFB130BP0DP73 79 aa17.16■□□□□ 0.34
SYNGAP1-206ENST00000479510 DEFB130AP0DP74 79 aa17.16■□□□□ 0.34
SYNGAP1-206ENST00000479510 GYPEP15421 78 aa17.14■□□□□ 0.33
SYNGAP1-206ENST00000479510 SS18Q15532 418 aa17.14■□□□□ 0.33
SYNGAP1-206ENST00000479510 LINC00482Q8N8I6 264 aa17.14■□□□□ 0.33
SYNGAP1-206ENST00000479510 NOTCH3Q9UM47 2321 aa17.14■□□□□ 0.33
SYNGAP1-206ENST00000479510 C5orf38Q86SI9 138 aa17.14■□□□□ 0.33
SYNGAP1-206ENST00000479510 IMUPQ9GZP8 106 aa17.14■□□□□ 0.33
SYNGAP1-206ENST00000479510 NBPF19A0A087WUL8 3843 aa17.13■□□□□ 0.33
SYNGAP1-206ENST00000479510 TENM4Q6N022 2769 aa17.13■□□□□ 0.33
SYNGAP1-206ENST00000479510 PRO0255Q9UI72 69 aa17.12■□□□□ 0.33
SYNGAP1-206ENST00000479510 C22orf24Q9Y442 160 aa17.12■□□□□ 0.33
SYNGAP1-206ENST00000479510 SETXQ7Z333 2677 aaKnown RBP17.12■□□□□ 0.33
SYNGAP1-206ENST00000479510 MALP21145 153 aa17.11■□□□□ 0.33
SYNGAP1-206ENST00000479510 Q8IZM0 81 aa17.11■□□□□ 0.33
SYNGAP1-206ENST00000479510 SMIM11BQ8TCY0 68 aa17.11■□□□□ 0.33
SYNGAP1-206ENST00000479510 X6R8D5 127 aa17.11■□□□□ 0.33
SYNGAP1-206ENST00000479510 C6orf226Q5I0X4 101 aa17.11■□□□□ 0.33
SYNGAP1-206ENST00000479510 SDIM1Q6ZPB5 146 aa17.11■□□□□ 0.33
SYNGAP1-206ENST00000479510 C2CD3Q4AC94 2353 aa17.1■□□□□ 0.33
SYNGAP1-206ENST00000479510 CCDC168Q8NDH2 2452 aa17.09■□□□□ 0.33
SYNGAP1-206ENST00000479510 LINC00643Q86TS7 51 aa17.09■□□□□ 0.33
SYNGAP1-206ENST00000479510 LYRM9A8MSI8 78 aa17.08■□□□□ 0.33
SYNGAP1-206ENST00000479510 NF1P21359 2839 aa17.08■□□□□ 0.32
SYNGAP1-206ENST00000479510 JMJD1CQ15652 2540 aa17.08■□□□□ 0.32
SYNGAP1-206ENST00000479510 DNAL4O96015 105 aa17.08■□□□□ 0.32
SYNGAP1-206ENST00000479510 LY6G6DO95868 133 aa17.06■□□□□ 0.32
SYNGAP1-206ENST00000479510 PFN2P35080 140 aa17.06■□□□□ 0.32
SYNGAP1-206ENST00000479510 KRTAP10-3P60369 221 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms