RNA–Protein interactions for RNA: ENST00000478696.5

GARNL3-214, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-214ENST00000478696 Q6ZRX8 168 aa0.81□□□□□ -2.28
GARNL3-214ENST00000478696 C9orf62Q8N4C0 152 aa0.81□□□□□ -2.28
GARNL3-214ENST00000478696 NXT2Q9NPJ8 142 aaKnown RBP0.81□□□□□ -2.28
GARNL3-214ENST00000478696 ARL2-SNX15V9GYD0 113 aa0.81□□□□□ -2.28
GARNL3-214ENST00000478696 ABCA8O94911 1581 aa0.81□□□□□ -2.28
GARNL3-214ENST00000478696 DNMBPQ6XZF7 1577 aa0.81□□□□□ -2.28
GARNL3-214ENST00000478696 MAP1BP46821 2468 aaKnown RBP0.81□□□□□ -2.28
GARNL3-214ENST00000478696 CFAP54Q96N23 3096 aa0.81□□□□□ -2.28
GARNL3-214ENST00000478696 SPTBN5Q9NRC6 3674 aaKnown RBP0.81□□□□□ -2.28
GARNL3-214ENST00000478696 ZNF462Q96JM2 2506 aa0.81□□□□□ -2.28
GARNL3-214ENST00000478696 ABCA12Q86UK0 2595 aa0.81□□□□□ -2.28
GARNL3-214ENST00000478696 HECTD1Q9ULT8 2610 aa0.81□□□□□ -2.28
GARNL3-214ENST00000478696 CNTRLQ7Z7A1 2325 aa0.81□□□□□ -2.28
GARNL3-214ENST00000478696 BRCA2P51587 3418 aa0.8□□□□□ -2.28
GARNL3-214ENST00000478696 MRC1P22897 1456 aa0.8□□□□□ -2.28
GARNL3-214ENST00000478696 RAPGEF2Q9Y4G8 1499 aa0.8□□□□□ -2.28
GARNL3-214ENST00000478696 PHIPQ8WWQ0 1821 aa0.8□□□□□ -2.28
GARNL3-214ENST00000478696 PRDM15P57071 1507 aaPredicted RBP0.8□□□□□ -2.28
GARNL3-214ENST00000478696 MAP3K1Q13233 1512 aa0.8□□□□□ -2.28
GARNL3-214ENST00000478696 CDK13Q14004 1512 aaKnown RBP0.8□□□□□ -2.28
GARNL3-214ENST00000478696 MAGI3Q5TCQ9 1506 aa0.8□□□□□ -2.28
GARNL3-214ENST00000478696 CEP170BQ9Y4F5 1589 aaPredicted RBP0.8□□□□□ -2.28
GARNL3-214ENST00000478696 MYO3AQ8NEV4 1616 aa0.8□□□□□ -2.28
GARNL3-214ENST00000478696 CICQ96RK0 1608 aaPredicted RBP0.8□□□□□ -2.28
GARNL3-214ENST00000478696 BIVM-ERCC5R4GMW8 1640 aa0.8□□□□□ -2.28
GARNL3-214ENST00000478696 TENM1Q9UKZ4 2725 aa0.8□□□□□ -2.28
GARNL3-214ENST00000478696 A0A0G2JND7 137 aa0.8□□□□□ -2.28
GARNL3-214ENST00000478696 ZNF137PP52743 207 aa0.8□□□□□ -2.28
GARNL3-214ENST00000478696 SPINK9Q5DT21 86 aa0.8□□□□□ -2.28
GARNL3-214ENST00000478696 CACFD1Q9UGQ2 172 aa0.8□□□□□ -2.28
GARNL3-214ENST00000478696 IQGAP1P46940 1657 aa0.8□□□□□ -2.28
GARNL3-214ENST00000478696 CLTCQ00610 1675 aaKnown RBP0.8□□□□□ -2.28
GARNL3-214ENST00000478696 RANBP2P49792 3224 aaKnown RBP0.8□□□□□ -2.28
GARNL3-214ENST00000478696 WDR87Q6ZQQ6 2873 aa0.8□□□□□ -2.28
GARNL3-214ENST00000478696 NWD2Q9ULI1 1742 aa0.8□□□□□ -2.28
GARNL3-214ENST00000478696 MARF1Q9Y4F3 1742 aaKnown RBP0.8□□□□□ -2.28
GARNL3-214ENST00000478696 MYO18BQ8IUG5 2567 aa0.8□□□□□ -2.28
GARNL3-214ENST00000478696 KALRNO60229 2985 aa0.8□□□□□ -2.28
GARNL3-214ENST00000478696 PATJQ8NI35 1801 aa0.8□□□□□ -2.28
GARNL3-214ENST00000478696 COL6A6A6NMZ7 2263 aa0.8□□□□□ -2.28
GARNL3-214ENST00000478696 MYH8P13535 1937 aa0.79□□□□□ -2.28
GARNL3-214ENST00000478696 EFCAB6Q5THR3 1501 aa0.79□□□□□ -2.28
GARNL3-214ENST00000478696 ZMYM4Q5VZL5 1548 aa0.79□□□□□ -2.28
GARNL3-214ENST00000478696 DIP2AQ14689 1571 aa0.79□□□□□ -2.28
GARNL3-214ENST00000478696 DNAH12Q6ZR08 3092 aa0.79□□□□□ -2.28
GARNL3-214ENST00000478696 ZC3H13Q5T200 1668 aaKnown RBP0.79□□□□□ -2.28
GARNL3-214ENST00000478696 WDFY4Q6ZS81 3184 aa0.79□□□□□ -2.28
GARNL3-214ENST00000478696 H7BZZ5 65 aa0.79□□□□□ -2.28
GARNL3-214ENST00000478696 SAA2P0DJI9 122 aaPredicted RBP0.79□□□□□ -2.28
GARNL3-214ENST00000478696 COX17Q14061 63 aa0.79□□□□□ -2.28
GARNL3-214ENST00000478696 CFAP126Q5VTH2 177 aa0.79□□□□□ -2.28
GARNL3-214ENST00000478696 PRO1933Q9H354 126 aa0.79□□□□□ -2.28
GARNL3-214ENST00000478696 SPTBN2O15020 2390 aa0.79□□□□□ -2.28
GARNL3-214ENST00000478696 PLXNA1Q9UIW2 1896 aa0.79□□□□□ -2.28
GARNL3-214ENST00000478696 PTPN13Q12923 2485 aa0.79□□□□□ -2.28
GARNL3-214ENST00000478696 HTTP42858 3142 aa0.79□□□□□ -2.28
GARNL3-214ENST00000478696 USP24Q9UPU5 2620 aa0.79□□□□□ -2.28
GARNL3-214ENST00000478696 MUC3AQ02505 3323 aa0.79□□□□□ -2.28
GARNL3-214ENST00000478696 CFAP46Q8IYW2 2715 aa0.79□□□□□ -2.28
GARNL3-214ENST00000478696 UNC13BO14795 1591 aa0.79□□□□□ -2.28
GARNL3-214ENST00000478696 PTPRZ1P23471 2315 aaPredicted RBP0.78□□□□□ -2.28
GARNL3-214ENST00000478696 SBF2Q86WG5 1849 aa0.78□□□□□ -2.28
GARNL3-214ENST00000478696 ANKRD17O75179 2603 aaKnown RBP0.78□□□□□ -2.28
GARNL3-214ENST00000478696 UQCRHLA0A096LP55 91 aa0.78□□□□□ -2.28
GARNL3-214ENST00000478696 C10orf142B7Z368 130 aa0.78□□□□□ -2.28
GARNL3-214ENST00000478696 SYS1-DBNDD2H3BUS1 97 aa0.78□□□□□ -2.28
GARNL3-214ENST00000478696 PIN1P1O15428 100 aa0.78□□□□□ -2.28
GARNL3-214ENST00000478696 GCHFRP30047 84 aa0.78□□□□□ -2.28
GARNL3-214ENST00000478696 KRTAP10-4P60372 401 aaPredicted RBP0.78□□□□□ -2.28
GARNL3-214ENST00000478696 PMCHL1Q16048 86 aa0.78□□□□□ -2.28
GARNL3-214ENST00000478696 FAM223AQ8IWN6 122 aa0.78□□□□□ -2.28
GARNL3-214ENST00000478696 PRR15LQ9BU68 103 aa0.78□□□□□ -2.28
GARNL3-214ENST00000478696 PROK2Q9HC23 129 aa0.78□□□□□ -2.28
GARNL3-214ENST00000478696 ASH1LQ9NR48 2969 aaKnown RBP0.78□□□□□ -2.28
GARNL3-214ENST00000478696 RALGAPBQ86X10 1494 aa0.78□□□□□ -2.28
GARNL3-214ENST00000478696 ACACBO00763 2458 aa0.78□□□□□ -2.28
GARNL3-214ENST00000478696 ZFYVE26Q68DK2 2539 aa0.78□□□□□ -2.28
GARNL3-214ENST00000478696 KDM5DQ9BY66 1539 aa0.78□□□□□ -2.28
GARNL3-214ENST00000478696 ADAMTS12P58397 1594 aa0.78□□□□□ -2.29
GARNL3-214ENST00000478696 ABCA5Q8WWZ7 1642 aa0.78□□□□□ -2.29
GARNL3-214ENST00000478696 PIEZO2Q9H5I5 2752 aa0.78□□□□□ -2.29
GARNL3-214ENST00000478696 TET3O43151 1660 aa0.78□□□□□ -2.29
GARNL3-214ENST00000478696 ABCA3Q99758 1704 aa0.78□□□□□ -2.29
GARNL3-214ENST00000478696 PAPPA2Q9BXP8 1791 aa0.78□□□□□ -2.29
GARNL3-214ENST00000478696 DOCK1Q14185 1865 aa0.78□□□□□ -2.29
GARNL3-214ENST00000478696 C5orf42Q9H799 3197 aa0.78□□□□□ -2.29
GARNL3-214ENST00000478696 FAM208BQ5VWN6 2430 aa0.77□□□□□ -2.29
GARNL3-214ENST00000478696 POLQO75417 2590 aa0.77□□□□□ -2.29
GARNL3-214ENST00000478696 SPEGQ15772 3267 aa0.77□□□□□ -2.29
GARNL3-214ENST00000478696 DCHS1Q96JQ0 3298 aa0.77□□□□□ -2.29
GARNL3-214ENST00000478696 LAMA3Q16787 3333 aa0.77□□□□□ -2.29
GARNL3-214ENST00000478696 TRBV25-1A0A075B6N4 114 aa0.77□□□□□ -2.29
GARNL3-214ENST00000478696 BCE1O60756 84 aa0.77□□□□□ -2.29
GARNL3-214ENST00000478696 UQCRHP07919 91 aa0.77□□□□□ -2.29
GARNL3-214ENST00000478696 MGPP08493 103 aa0.77□□□□□ -2.29
GARNL3-214ENST00000478696 C20orf78Q9BR46 151 aa0.77□□□□□ -2.29
GARNL3-214ENST00000478696 UACAQ9BZF9 1416 aa0.77□□□□□ -2.29
GARNL3-214ENST00000478696 MLH3Q9UHC1 1453 aa0.77□□□□□ -2.29
GARNL3-214ENST00000478696 ABCC1P33527 1531 aa0.77□□□□□ -2.29
GARNL3-214ENST00000478696 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms