RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 CRLF1O75462 422 aa3.06□□□□□ -1.92
GPNMB-210ENST00000478451 IGHV3-53P01767 116 aa3.06□□□□□ -1.92
GPNMB-210ENST00000478451 DEFB112Q30KQ8 113 aa3.06□□□□□ -1.92
GPNMB-210ENST00000478451 TTC32Q5I0X7 151 aa3.06□□□□□ -1.92
GPNMB-210ENST00000478451 C2orf82Q6UX34 121 aa3.06□□□□□ -1.92
GPNMB-210ENST00000478451 CARD19Q96LW7 228 aa3.06□□□□□ -1.92
GPNMB-210ENST00000478451 OVOL2Q9BRP0 275 aa3.06□□□□□ -1.92
GPNMB-210ENST00000478451 UBE2D4Q9Y2X8 147 aa3.06□□□□□ -1.92
GPNMB-210ENST00000478451 LAMA5O15230 3695 aa3.06□□□□□ -1.92
GPNMB-210ENST00000478451 ANKRD17O75179 2603 aaKnown RBP3.05□□□□□ -1.92
GPNMB-210ENST00000478451 IGHV3-64A0A075B6Q5 118 aa3.05□□□□□ -1.92
GPNMB-210ENST00000478451 TRBV10-1A0A0K0K1A3 114 aa3.05□□□□□ -1.92
GPNMB-210ENST00000478451 K7EQD1 137 aa3.05□□□□□ -1.92
GPNMB-210ENST00000478451 LST1O00453 97 aa3.05□□□□□ -1.92
GPNMB-210ENST00000478451 RS1O15537 224 aa3.05□□□□□ -1.92
GPNMB-210ENST00000478451 NDUFA7O95182 113 aa3.05□□□□□ -1.92
GPNMB-210ENST00000478451 MT-ATP8P03928 68 aa3.05□□□□□ -1.92
GPNMB-210ENST00000478451 DEFB131AP59861 70 aa3.05□□□□□ -1.92
GPNMB-210ENST00000478451 DAZ2Q13117 558 aaKnown RBP3.05□□□□□ -1.92
GPNMB-210ENST00000478451 LCE3CQ5T5A8 94 aa3.05□□□□□ -1.92
GPNMB-210ENST00000478451 FAM19A3Q7Z5A8 133 aa3.05□□□□□ -1.92
GPNMB-210ENST00000478451 DAZ4Q86SG3 579 aaKnown RBP3.05□□□□□ -1.92
GPNMB-210ENST00000478451 TMEM61Q8N0U2 210 aa3.05□□□□□ -1.92
GPNMB-210ENST00000478451 TMEM86BQ8N661 226 aa3.05□□□□□ -1.92
GPNMB-210ENST00000478451 C4orf3Q8WVX3 66 aa3.05□□□□□ -1.92
GPNMB-210ENST00000478451 TMEM101Q96IK0 257 aa3.05□□□□□ -1.92
GPNMB-210ENST00000478451 LINC01587Q99440 93 aa3.05□□□□□ -1.92
GPNMB-210ENST00000478451 DAZ3Q9NR90 486 aaKnown RBP3.05□□□□□ -1.92
GPNMB-210ENST00000478451 CSDC2Q9Y534 153 aaKnown RBP3.05□□□□□ -1.92
GPNMB-210ENST00000478451 MED13LQ71F56 2210 aa3.05□□□□□ -1.92
GPNMB-210ENST00000478451 CR1P17927 2039 aa3.05□□□□□ -1.92
GPNMB-210ENST00000478451 IGF2RP11717 2491 aa3.04□□□□□ -1.92
GPNMB-210ENST00000478451 DOPEY2Q9Y3R5 2298 aa3.04□□□□□ -1.92
GPNMB-210ENST00000478451 H7C423 109 aa3.04□□□□□ -1.92
GPNMB-210ENST00000478451 UBE2L6O14933 153 aa3.04□□□□□ -1.92
GPNMB-210ENST00000478451 HTN1P15515 57 aa3.04□□□□□ -1.92
GPNMB-210ENST00000478451 DEFB121Q5J5C9 76 aa3.04□□□□□ -1.92
GPNMB-210ENST00000478451 Q8N2B8 174 aa3.04□□□□□ -1.92
GPNMB-210ENST00000478451 CITED1Q99966 193 aa3.04□□□□□ -1.92
GPNMB-210ENST00000478451 CHCHD7Q9BUK0 85 aa3.04□□□□□ -1.92
GPNMB-210ENST00000478451 ZNF702PQ9H963 129 aa3.04□□□□□ -1.92
GPNMB-210ENST00000478451 ITPR1Q14643 2758 aa3.03□□□□□ -1.92
GPNMB-210ENST00000478451 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.03□□□□□ -1.92
GPNMB-210ENST00000478451 TRAV26-1A0A087WT03 109 aa3.03□□□□□ -1.92
GPNMB-210ENST00000478451 TRAV8-3A0A0A6YYJ7 113 aa3.03□□□□□ -1.92
GPNMB-210ENST00000478451 IGHV3-73A0A0B4J1V6 119 aa3.03□□□□□ -1.92
GPNMB-210ENST00000478451 TRAV13-2A0A0B4J235 113 aa3.03□□□□□ -1.92
GPNMB-210ENST00000478451 TRAV4A0A0B4J268 109 aa3.03□□□□□ -1.92
GPNMB-210ENST00000478451 A0A1B0GVY2 172 aa3.03□□□□□ -1.92
GPNMB-210ENST00000478451 IGKV2-29A2NJV5 120 aaPredicted RBP3.03□□□□□ -1.92
GPNMB-210ENST00000478451 KNCNA6PVL3 124 aa3.03□□□□□ -1.92
GPNMB-210ENST00000478451 COX7A2LO14548 114 aa3.03□□□□□ -1.92
GPNMB-210ENST00000478451 TRACP01848 142 aa3.03□□□□□ -1.92
GPNMB-210ENST00000478451 INAFM2P0DMQ5 153 aa3.03□□□□□ -1.92
GPNMB-210ENST00000478451 MEIG1Q5JSS6 88 aa3.03□□□□□ -1.92
GPNMB-210ENST00000478451 FAM222AQ5U5X8 452 aa3.03□□□□□ -1.92
GPNMB-210ENST00000478451 LRRC75A-AS1Q8N1F1 130 aa3.03□□□□□ -1.92
GPNMB-210ENST00000478451 C15orf53Q8NAA6 179 aa3.03□□□□□ -1.92
GPNMB-210ENST00000478451 C11orf45Q8TAV5 145 aa3.03□□□□□ -1.92
GPNMB-210ENST00000478451 IMUPQ9GZP8 106 aa3.03□□□□□ -1.92
GPNMB-210ENST00000478451 Q9HAA7 133 aa3.03□□□□□ -1.92
GPNMB-210ENST00000478451 IGLV7-46A0A075B6I9 117 aa3.02□□□□□ -1.93
GPNMB-210ENST00000478451 ATP5G1P05496 136 aa3.02□□□□□ -1.93
GPNMB-210ENST00000478451 RBMY1A1P0DJD3 496 aaKnown RBP3.02□□□□□ -1.93
GPNMB-210ENST00000478451 RBMY1CP0DJD4 496 aa3.02□□□□□ -1.93
GPNMB-210ENST00000478451 NDUFV3P56181 108 aaKnown RBP3.02□□□□□ -1.93
GPNMB-210ENST00000478451 RBMY1FQ15415 496 aaKnown RBP3.02□□□□□ -1.93
GPNMB-210ENST00000478451 C11orf72Q8NBR9 251 aa3.02□□□□□ -1.93
GPNMB-210ENST00000478451 LINC00308Q8TCZ7 52 aa3.02□□□□□ -1.93
GPNMB-210ENST00000478451 DEFB104AQ8WTQ1 72 aa3.02□□□□□ -1.93
GPNMB-210ENST00000478451 CDKN2A-AS1Q9UH64 79 aa3.02□□□□□ -1.93
GPNMB-210ENST00000478451 SPTAN1Q13813 2472 aaKnown RBP3.02□□□□□ -1.93
GPNMB-210ENST00000478451 ATRXP46100 2492 aa3.01□□□□□ -1.93
GPNMB-210ENST00000478451 NBASA2RRP1 2371 aa3.01□□□□□ -1.93
GPNMB-210ENST00000478451 TRGV1A0A0A0MS02 117 aa3.01□□□□□ -1.93
GPNMB-210ENST00000478451 TRBV7-7A0A0K0K1E9 115 aa3.01□□□□□ -1.93
GPNMB-210ENST00000478451 TEX49A0A1B0GTD5 131 aa3.01□□□□□ -1.93
GPNMB-210ENST00000478451 DNAL4O96015 105 aa3.01□□□□□ -1.93
GPNMB-210ENST00000478451 CRPP02741 224 aa3.01□□□□□ -1.93
GPNMB-210ENST00000478451 NPC2P61916 151 aa3.01□□□□□ -1.93
GPNMB-210ENST00000478451 DEFB114Q30KQ6 69 aa3.01□□□□□ -1.93
GPNMB-210ENST00000478451 RNASE13Q5GAN3 156 aaKnown RBP3.01□□□□□ -1.93
GPNMB-210ENST00000478451 CEMP1Q6PRD7 247 aaPredicted RBP3.01□□□□□ -1.93
GPNMB-210ENST00000478451 C10orf99Q6UWK7 81 aa3.01□□□□□ -1.93
GPNMB-210ENST00000478451 C16orf74Q96GX8 76 aa3.01□□□□□ -1.93
GPNMB-210ENST00000478451 TMEM243Q9BU79 118 aa3.01□□□□□ -1.93
GPNMB-210ENST00000478451 AKAP6Q13023 2319 aa3.01□□□□□ -1.93
GPNMB-210ENST00000478451 IGHV3OR16-12A0A075B7B8 117 aa3□□□□□ -1.93
GPNMB-210ENST00000478451 A0A096LNT2 108 aa3□□□□□ -1.93
GPNMB-210ENST00000478451 IGHV3-38A0A0C4DH36 116 aa3□□□□□ -1.93
GPNMB-210ENST00000478451 TRBV6-4A0A1B0GX49 114 aa3□□□□□ -1.93
GPNMB-210ENST00000478451 RBMY1BA6NDE4 496 aaKnown RBP3□□□□□ -1.93
GPNMB-210ENST00000478451 RBMY1EA6NEQ0 496 aaKnown RBP3□□□□□ -1.93
GPNMB-210ENST00000478451 H0YGX0 51 aa3□□□□□ -1.93
GPNMB-210ENST00000478451 RBMY1DP0C7P1 496 aaKnown RBP3□□□□□ -1.93
GPNMB-210ENST00000478451 CXCL5P42830 114 aa3□□□□□ -1.93
GPNMB-210ENST00000478451 RPL28P46779 137 aaKnown RBP3□□□□□ -1.93
GPNMB-210ENST00000478451 KRTAP10-3P60369 221 aa3□□□□□ -1.93
GPNMB-210ENST00000478451 LINC00242Q5T6M2 205 aa3□□□□□ -1.93
GPNMB-210ENST00000478451 LINC00643Q86TS7 51 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms