RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 TIMM17BO60830 172 aa5.56□□□□□ -1.52
VMA21-203ENST00000477649 SMIM13P0DJ93 91 aa5.56□□□□□ -1.52
VMA21-203ENST00000477649 TCTAP57738 103 aa5.56□□□□□ -1.52
VMA21-203ENST00000477649 KRTAP10-11P60412 298 aa5.56□□□□□ -1.52
VMA21-203ENST00000477649 CEMP1Q6PRD7 247 aaPredicted RBP5.56□□□□□ -1.52
VMA21-203ENST00000477649 COPS9Q8WXC6 57 aa5.56□□□□□ -1.52
VMA21-203ENST00000477649 CHCHD5Q9BSY4 110 aa5.56□□□□□ -1.52
VMA21-203ENST00000477649 LOC100131303A0A0U1RQF7 123 aa5.55□□□□□ -1.52
VMA21-203ENST00000477649 KRTAP9-7A8MTY7 169 aa5.55□□□□□ -1.52
VMA21-203ENST00000477649 TAX1BP3O14907 124 aa5.55□□□□□ -1.52
VMA21-203ENST00000477649 IGHV3-30-3P0DP02 117 aa5.55□□□□□ -1.52
VMA21-203ENST00000477649 SRSF9Q13242 221 aaKnown RBP eCLIP5.55□□□□□ -1.52
VMA21-203ENST00000477649 LINC00242Q5T6M2 205 aa5.55□□□□□ -1.52
VMA21-203ENST00000477649 ZFAND6Q6FIF0 208 aa5.55□□□□□ -1.52
VMA21-203ENST00000477649 LINC01561Q8N1V8 128 aa5.55□□□□□ -1.52
VMA21-203ENST00000477649 TTTY13Q9BZ97 58 aa5.55□□□□□ -1.52
VMA21-203ENST00000477649 ICOSQ9Y6W8 199 aa5.55□□□□□ -1.52
VMA21-203ENST00000477649 IGLV5-39A0A0G2JS06 123 aa5.54□□□□□ -1.52
VMA21-203ENST00000477649 A0A0J9YXY3 114 aa5.54□□□□□ -1.52
VMA21-203ENST00000477649 A0A1B0GWB2 263 aa5.54□□□□□ -1.52
VMA21-203ENST00000477649 C9orf118A6NHY6 69 aa5.54□□□□□ -1.52
VMA21-203ENST00000477649 F5H768 121 aa5.54□□□□□ -1.52
VMA21-203ENST00000477649 HERV-K104P63124 156 aa5.54□□□□□ -1.52
VMA21-203ENST00000477649 CIRBPQ14011 172 aaKnown RBP5.54□□□□□ -1.52
VMA21-203ENST00000477649 PPDPFQ9H3Y8 114 aa5.54□□□□□ -1.52
VMA21-203ENST00000477649 TRAV13-1A0A0B4J241 112 aa5.53□□□□□ -1.52
VMA21-203ENST00000477649 NDUFA1O15239 70 aa5.53□□□□□ -1.52
VMA21-203ENST00000477649 IFITM1P13164 125 aa5.53□□□□□ -1.52
VMA21-203ENST00000477649 RPL24P83731 157 aaKnown RBP5.53□□□□□ -1.52
VMA21-203ENST00000477649 GAGE6Q13070 117 aa5.53□□□□□ -1.52
VMA21-203ENST00000477649 LELP1Q5T871 98 aa5.53□□□□□ -1.52
VMA21-203ENST00000477649 SPATA25Q9BR10 227 aa5.53□□□□□ -1.52
VMA21-203ENST00000477649 CDKN2A-AS1Q9UH64 79 aa5.53□□□□□ -1.52
VMA21-203ENST00000477649 NDUFA12Q9UI09 145 aa5.53□□□□□ -1.52
VMA21-203ENST00000477649 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.52□□□□□ -1.53
VMA21-203ENST00000477649 FXYD2P54710 66 aa5.52□□□□□ -1.53
VMA21-203ENST00000477649 TSPEAR-AS2P59090 65 aa5.52□□□□□ -1.53
VMA21-203ENST00000477649 UBE2V1Q13404 147 aa5.52□□□□□ -1.53
VMA21-203ENST00000477649 SS18Q15532 418 aa5.52□□□□□ -1.53
VMA21-203ENST00000477649 VAMP3Q15836 100 aa5.52□□□□□ -1.53
VMA21-203ENST00000477649 RNASE13Q5GAN3 156 aaKnown RBP5.52□□□□□ -1.53
VMA21-203ENST00000477649 KPRPQ5T749 579 aaPredicted RBP5.52□□□□□ -1.53
VMA21-203ENST00000477649 GTF2H5Q6ZYL4 71 aa5.52□□□□□ -1.53
VMA21-203ENST00000477649 SPANXDQ9BXN6 97 aa5.52□□□□□ -1.53
VMA21-203ENST00000477649 SPANXCQ9NY87 97 aa5.52□□□□□ -1.53
VMA21-203ENST00000477649 CELA1Q9UNI1 258 aa5.52□□□□□ -1.53
VMA21-203ENST00000477649 NOTCH3Q9UM47 2321 aa5.52□□□□□ -1.53
VMA21-203ENST00000477649 SMIM1B2RUZ4 78 aa5.51□□□□□ -1.53
VMA21-203ENST00000477649 TMEM262E9PQX1 116 aa5.51□□□□□ -1.53
VMA21-203ENST00000477649 G3V4G9 280 aa5.51□□□□□ -1.53
VMA21-203ENST00000477649 DEFB4AO15263 64 aa5.51□□□□□ -1.53
VMA21-203ENST00000477649 IGHV3-30P01768 117 aa5.51□□□□□ -1.53
VMA21-203ENST00000477649 SPINK8P0C7L1 97 aa5.51□□□□□ -1.53
VMA21-203ENST00000477649 IGHV3-30-5P0DP03 117 aa5.51□□□□□ -1.53
VMA21-203ENST00000477649 RBX1P62877 108 aa5.51□□□□□ -1.53
VMA21-203ENST00000477649 TNP2Q05952 138 aa5.51□□□□□ -1.53
VMA21-203ENST00000477649 C12orf74Q32Q52 190 aa5.51□□□□□ -1.53
VMA21-203ENST00000477649 LYRM7Q5U5X0 104 aa5.51□□□□□ -1.53
VMA21-203ENST00000477649 NHP2Q9NX24 153 aaKnown RBP5.51□□□□□ -1.53
VMA21-203ENST00000477649 IGLV4-60A0A075B6I1 120 aa5.5□□□□□ -1.53
VMA21-203ENST00000477649 A0A087WZ39 114 aa5.5□□□□□ -1.53
VMA21-203ENST00000477649 TRAV8-3A0A0A6YYJ7 113 aa5.5□□□□□ -1.53
VMA21-203ENST00000477649 IGHV3OR16-9A0A0B4J2B5 98 aa5.5□□□□□ -1.53
VMA21-203ENST00000477649 LINC00959A0A1B0GUT2 108 aa5.5□□□□□ -1.53
VMA21-203ENST00000477649 FABP2P12104 132 aa5.5□□□□□ -1.53
VMA21-203ENST00000477649 COX6A2Q02221 97 aa5.5□□□□□ -1.53
VMA21-203ENST00000477649 C10orf126Q8N4M7 172 aa5.5□□□□□ -1.53
VMA21-203ENST00000477649 IGHV3-64A0A075B6Q5 118 aa5.49□□□□□ -1.53
VMA21-203ENST00000477649 A0A096LPF7 62 aa5.49□□□□□ -1.53
VMA21-203ENST00000477649 A0A0B4J2C4 111 aa5.49□□□□□ -1.53
VMA21-203ENST00000477649 A0A1W2PPM0 123 aa5.49□□□□□ -1.53
VMA21-203ENST00000477649 MIAQ16674 131 aa5.49□□□□□ -1.53
VMA21-203ENST00000477649 C11orf45Q8TAV5 145 aa5.49□□□□□ -1.53
VMA21-203ENST00000477649 TM2D3Q9BRN9 247 aa5.49□□□□□ -1.53
VMA21-203ENST00000477649 GAGE10A6NGK3 116 aa5.48□□□□□ -1.53
VMA21-203ENST00000477649 H3BUT2 72 aa5.48□□□□□ -1.53
VMA21-203ENST00000477649 HTN3P15516 51 aa5.48□□□□□ -1.53
VMA21-203ENST00000477649 CD164L2Q6UWJ8 174 aa5.48□□□□□ -1.53
VMA21-203ENST00000477649 TRAV8-4A0A0B4J246 113 aa5.47□□□□□ -1.53
VMA21-203ENST00000477649 IGLL5B9A064 214 aa5.47□□□□□ -1.53
VMA21-203ENST00000477649 CXCL5P42830 114 aa5.47□□□□□ -1.53
VMA21-203ENST00000477649 LYPD5Q6UWN5 251 aa5.47□□□□□ -1.53
VMA21-203ENST00000477649 C15orf53Q8NAA6 179 aa5.47□□□□□ -1.53
VMA21-203ENST00000477649 COX7B2Q8TF08 81 aa5.47□□□□□ -1.53
VMA21-203ENST00000477649 RAB37Q96AX2 223 aa5.47□□□□□ -1.53
VMA21-203ENST00000477649 ZNF625Q96I27 306 aaPredicted RBP5.47□□□□□ -1.53
VMA21-203ENST00000477649 LITAFQ99732 161 aa5.47□□□□□ -1.53
VMA21-203ENST00000477649 Q9H8V8 135 aa5.47□□□□□ -1.53
VMA21-203ENST00000477649 PRO1854Q9UHT4 67 aa5.47□□□□□ -1.53
VMA21-203ENST00000477649 TENM1Q9UKZ4 2725 aa5.47□□□□□ -1.53
VMA21-203ENST00000477649 TRAV10A0A0B4J240 114 aa5.46□□□□□ -1.54
VMA21-203ENST00000477649 IBA57-AS1B1ANH7 110 aa5.46□□□□□ -1.54
VMA21-203ENST00000477649 K7EP34 96 aa5.46□□□□□ -1.54
VMA21-203ENST00000477649 APOMO95445 188 aa5.46□□□□□ -1.54
VMA21-203ENST00000477649 ANGP03950 147 aaKnown RBP5.46□□□□□ -1.54
VMA21-203ENST00000477649 PRSS2P07478 247 aa5.46□□□□□ -1.54
VMA21-203ENST00000477649 REG3AQ06141 175 aa5.46□□□□□ -1.54
VMA21-203ENST00000477649 MUSTN1Q8IVN3 82 aa5.46□□□□□ -1.54
VMA21-203ENST00000477649 Q8IZM0 81 aa5.46□□□□□ -1.54
VMA21-203ENST00000477649 MUC7Q8TAX7 377 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms