RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 JOSD1Q15040 202 aaPredicted RBP3.48□□□□□ -1.85
VPS45-207ENST00000477558 ADIRFQ15847 76 aa3.48□□□□□ -1.85
VPS45-207ENST00000477558 ZNF56Q15929 161 aa3.48□□□□□ -1.85
VPS45-207ENST00000477558 SMIM15Q7Z3B0 74 aa3.48□□□□□ -1.85
VPS45-207ENST00000477558 C6orf223Q8N319 242 aa3.48□□□□□ -1.85
VPS45-207ENST00000477558 RNF185Q96GF1 192 aa3.48□□□□□ -1.85
VPS45-207ENST00000477558 DNAJC30Q96LL9 226 aa3.48□□□□□ -1.85
VPS45-207ENST00000477558 YPEL4Q96NS1 127 aa3.48□□□□□ -1.85
VPS45-207ENST00000477558 TMEM191AQ9H0A3 160 aa3.48□□□□□ -1.85
VPS45-207ENST00000477558 TRBV6-5A0A0K0K1A5 114 aa3.47□□□□□ -1.85
VPS45-207ENST00000477558 M0R2N4 97 aa3.47□□□□□ -1.85
VPS45-207ENST00000477558 PHOX2AO14813 284 aa3.47□□□□□ -1.85
VPS45-207ENST00000477558 IQCJQ1A5X6 159 aa3.47□□□□□ -1.85
VPS45-207ENST00000477558 RASL11AQ6T310 242 aa3.47□□□□□ -1.85
VPS45-207ENST00000477558 NTM-AS1Q6ZSK4 140 aa3.47□□□□□ -1.85
VPS45-207ENST00000477558 DAZ4Q86SG3 579 aaKnown RBP3.47□□□□□ -1.85
VPS45-207ENST00000477558 ZNF664Q8N3J9 261 aa3.47□□□□□ -1.85
VPS45-207ENST00000477558 PGLYRP4Q96LB8 373 aa3.47□□□□□ -1.85
VPS45-207ENST00000477558 PACRGQ96M98 296 aaPredicted RBP3.47□□□□□ -1.85
VPS45-207ENST00000477558 CHCHD7Q9BUK0 85 aa3.47□□□□□ -1.85
VPS45-207ENST00000477558 DAZ3Q9NR90 486 aaKnown RBP3.47□□□□□ -1.85
VPS45-207ENST00000477558 NAT8BQ9UHF3 227 aa3.47□□□□□ -1.85
VPS45-207ENST00000477558 URGCP-MRPS24S4R325 110 aa3.47□□□□□ -1.85
VPS45-207ENST00000477558 TRBV6-8A0A0A6YYG3 113 aa3.46□□□□□ -1.86
VPS45-207ENST00000477558 IBA57-AS1B1ANH7 110 aa3.46□□□□□ -1.86
VPS45-207ENST00000477558 H7C1H1 209 aa3.46□□□□□ -1.86
VPS45-207ENST00000477558 PPBPP02775 128 aa3.46□□□□□ -1.86
VPS45-207ENST00000477558 SMIM17P0DL12 118 aa3.46□□□□□ -1.86
VPS45-207ENST00000477558 RPS10P46783 165 aaKnown RBP3.46□□□□□ -1.86
VPS45-207ENST00000477558 C5orf47Q569G3 176 aa3.46□□□□□ -1.86
VPS45-207ENST00000477558 C1orf134Q5TEV5 83 aa3.46□□□□□ -1.86
VPS45-207ENST00000477558 ATP5L2Q7Z4Y8 100 aa3.46□□□□□ -1.86
VPS45-207ENST00000477558 NIT1Q86X76 327 aa3.46□□□□□ -1.86
VPS45-207ENST00000477558 C10orf126Q8N4M7 172 aa3.46□□□□□ -1.86
VPS45-207ENST00000477558 TRAV8-6A0A0B4J262 113 aa3.45□□□□□ -1.86
VPS45-207ENST00000477558 TRAV26-2A0A0B4J265 109 aa3.45□□□□□ -1.86
VPS45-207ENST00000477558 MGPP08493 103 aa3.45□□□□□ -1.86
VPS45-207ENST00000477558 FABP4P15090 132 aa3.45□□□□□ -1.86
VPS45-207ENST00000477558 PMCHP20382 165 aa3.45□□□□□ -1.86
VPS45-207ENST00000477558 RIGQ13278 110 aa3.45□□□□□ -1.86
VPS45-207ENST00000477558 TMEM97Q5BJF2 176 aa3.45□□□□□ -1.86
VPS45-207ENST00000477558 MRAP2Q96G30 205 aa3.45□□□□□ -1.86
VPS45-207ENST00000477558 IMMP2LQ96T52 175 aa3.45□□□□□ -1.86
VPS45-207ENST00000477558 PRR34Q9NV39 138 aa3.45□□□□□ -1.86
VPS45-207ENST00000477558 TRBV24-1A0A075B6N3 115 aa3.44□□□□□ -1.86
VPS45-207ENST00000477558 TRBV27A0A0K0K1C4 114 aa3.44□□□□□ -1.86
VPS45-207ENST00000477558 HIST1H2BKO60814 126 aa3.44□□□□□ -1.86
VPS45-207ENST00000477558 NCR2O95944 276 aa3.44□□□□□ -1.86
VPS45-207ENST00000477558 HIST1H2BJP06899 126 aa3.44□□□□□ -1.86
VPS45-207ENST00000477558 HIST1H2BOP23527 126 aa3.44□□□□□ -1.86
VPS45-207ENST00000477558 HIST1H2BBP33778 126 aa3.44□□□□□ -1.86
VPS45-207ENST00000477558 POLR2KP53803 58 aaKnown RBP3.44□□□□□ -1.86
VPS45-207ENST00000477558 HIST1H2BDP58876 126 aa3.44□□□□□ -1.86
VPS45-207ENST00000477558 HIST1H2BCP62807 126 aa3.44□□□□□ -1.86
VPS45-207ENST00000477558 RPL32P62910 135 aaKnown RBP3.44□□□□□ -1.86
VPS45-207ENST00000477558 HBBP68871 147 aa3.44□□□□□ -1.86
VPS45-207ENST00000477558 HIST2H2BEQ16778 126 aa3.44□□□□□ -1.86
VPS45-207ENST00000477558 OR10J3Q5JRS4 329 aa3.44□□□□□ -1.86
VPS45-207ENST00000477558 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.44□□□□□ -1.86
VPS45-207ENST00000477558 FAM104BQ5XKR9 115 aa3.44□□□□□ -1.86
VPS45-207ENST00000477558 AMN1Q8IY45 258 aa3.44□□□□□ -1.86
VPS45-207ENST00000477558 BOD1L2Q8IYS8 172 aa3.44□□□□□ -1.86
VPS45-207ENST00000477558 HIST1H2BHQ93079 126 aa3.44□□□□□ -1.86
VPS45-207ENST00000477558 BORCS7Q96B45 105 aa3.44□□□□□ -1.86
VPS45-207ENST00000477558 RPL39LQ96EH5 51 aaKnown RBP3.44□□□□□ -1.86
VPS45-207ENST00000477558 HIST1H2BNQ99877 126 aa3.44□□□□□ -1.86
VPS45-207ENST00000477558 HIST1H2BMQ99879 126 aa3.44□□□□□ -1.86
VPS45-207ENST00000477558 HIST1H2BLQ99880 126 aa3.44□□□□□ -1.86
VPS45-207ENST00000477558 TMEM70Q9BUB7 260 aa3.44□□□□□ -1.86
VPS45-207ENST00000477558 TMEM242Q9NWH2 141 aa3.44□□□□□ -1.86
VPS45-207ENST00000477558 TRBV25-1A0A075B6N4 114 aa3.44□□□□□ -1.86
VPS45-207ENST00000477558 TRAV9-1A0A075B6T8 112 aa3.44□□□□□ -1.86
VPS45-207ENST00000477558 TRAV9-2A0A087WT02 112 aa3.44□□□□□ -1.86
VPS45-207ENST00000477558 LRCOL1A6NCL2 159 aa3.44□□□□□ -1.86
VPS45-207ENST00000477558 SDHAF1A6NFY7 115 aa3.44□□□□□ -1.86
VPS45-207ENST00000477558 TMEM238C9JI98 176 aa3.44□□□□□ -1.86
VPS45-207ENST00000477558 ESDP10768 282 aa3.44□□□□□ -1.86
VPS45-207ENST00000477558 MPV17L2Q567V2 206 aa3.44□□□□□ -1.86
VPS45-207ENST00000477558 PDZD11Q5EBL8 140 aa3.44□□□□□ -1.86
VPS45-207ENST00000477558 COL5A1-AS1Q5SY13 56 aa3.44□□□□□ -1.86
VPS45-207ENST00000477558 Q6ZVQ6 151 aa3.44□□□□□ -1.86
VPS45-207ENST00000477558 Q8N377 158 aa3.44□□□□□ -1.86
VPS45-207ENST00000477558 IGHV1-24A0A0C4DH33 117 aa3.43□□□□□ -1.86
VPS45-207ENST00000477558 C20orf202A1L168 122 aa3.43□□□□□ -1.86
VPS45-207ENST00000477558 HSBP1O75506 76 aa3.43□□□□□ -1.86
VPS45-207ENST00000477558 TRGC2P03986 189 aa3.43□□□□□ -1.86
VPS45-207ENST00000477558 ELOBQ15370 118 aa3.43□□□□□ -1.86
VPS45-207ENST00000477558 MRPL51Q4U2R6 128 aaKnown RBP3.43□□□□□ -1.86
VPS45-207ENST00000477558 KRTAP26-1Q6PEX3 210 aa3.43□□□□□ -1.86
VPS45-207ENST00000477558 C20orf203Q8NBC4 194 aa3.43□□□□□ -1.86
VPS45-207ENST00000477558 ORAOV1Q8WV07 137 aa3.43□□□□□ -1.86
VPS45-207ENST00000477558 MAP1LC3CQ9BXW4 147 aa3.43□□□□□ -1.86
VPS45-207ENST00000477558 A0A087WTM6 91 aa3.42□□□□□ -1.86
VPS45-207ENST00000477558 TRAV8-3A0A0A6YYJ7 113 aa3.42□□□□□ -1.86
VPS45-207ENST00000477558 PPP1R17O96001 155 aa3.42□□□□□ -1.86
VPS45-207ENST00000477558 IGHV3-30P01768 117 aa3.42□□□□□ -1.86
VPS45-207ENST00000477558 IGHV3-33P01772 117 aa3.42□□□□□ -1.86
VPS45-207ENST00000477558 IGHV3-30-3P0DP02 117 aa3.42□□□□□ -1.86
VPS45-207ENST00000477558 IGHV3-30-5P0DP03 117 aa3.42□□□□□ -1.86
VPS45-207ENST00000477558 RPL13AP40429 203 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms