RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 FXYD2P54710 66 aa11.65□□□□□ -0.54
EPHB4-204ENST00000477446 SPANXB1Q9NS25 103 aaPredicted RBP11.64□□□□□ -0.55
EPHB4-204ENST00000477446 GAGE12JA6NER3 117 aa11.63□□□□□ -0.55
EPHB4-204ENST00000477446 TIRAPP58753 221 aa11.63□□□□□ -0.55
EPHB4-204ENST00000477446 GAGE4Q13068 117 aa11.63□□□□□ -0.55
EPHB4-204ENST00000477446 GAGE5Q13069 117 aa11.63□□□□□ -0.55
EPHB4-204ENST00000477446 GAGE13Q4V321 117 aa11.63□□□□□ -0.55
EPHB4-204ENST00000477446 TMEM238LA0A1B0GVL6 79 aa11.62□□□□□ -0.55
EPHB4-204ENST00000477446 A6NJY4 79 aa11.62□□□□□ -0.55
EPHB4-204ENST00000477446 LINC00694P0DN24 101 aa11.62□□□□□ -0.55
EPHB4-204ENST00000477446 AMMECR1LQ6DCA0 310 aa11.62□□□□□ -0.55
EPHB4-204ENST00000477446 CCL25O15444 150 aa11.61□□□□□ -0.55
EPHB4-204ENST00000477446 UBE2D1P51668 147 aa11.61□□□□□ -0.55
EPHB4-204ENST00000477446 SRSF9Q13242 221 aaKnown RBP eCLIP11.61□□□□□ -0.55
EPHB4-204ENST00000477446 ESRGQ1W209 222 aa11.61□□□□□ -0.55
EPHB4-204ENST00000477446 Q6ZUT4 128 aa11.61□□□□□ -0.55
EPHB4-204ENST00000477446 GTF2H5Q6ZYL4 71 aa11.61□□□□□ -0.55
EPHB4-204ENST00000477446 FAM19A3Q7Z5A8 133 aa11.61□□□□□ -0.55
EPHB4-204ENST00000477446 GEMIN7Q9H840 131 aaKnown RBP11.61□□□□□ -0.55
EPHB4-204ENST00000477446 LYSTQ99698 3801 aa11.6□□□□□ -0.55
EPHB4-204ENST00000477446 A0A1B0GWB2 263 aa11.6□□□□□ -0.55
EPHB4-204ENST00000477446 SH2D6Q7Z4S9 175 aa11.6□□□□□ -0.55
EPHB4-204ENST00000477446 OR5A1Q8NGJ0 315 aa11.6□□□□□ -0.55
EPHB4-204ENST00000477446 TMEM243Q9BU79 118 aa11.6□□□□□ -0.55
EPHB4-204ENST00000477446 NHP2Q9NX24 153 aaKnown RBP11.6□□□□□ -0.55
EPHB4-204ENST00000477446 IGHV1-58A0A0C4DH39 117 aa11.59□□□□□ -0.55
EPHB4-204ENST00000477446 LYPD5Q6UWN5 251 aa11.59□□□□□ -0.55
EPHB4-204ENST00000477446 NTM-AS1Q6ZSK4 140 aa11.59□□□□□ -0.55
EPHB4-204ENST00000477446 ATP6V0E2Q8NHE4 81 aa11.59□□□□□ -0.55
EPHB4-204ENST00000477446 IGLV5-45A0A087WSX0 123 aa11.58□□□□□ -0.55
EPHB4-204ENST00000477446 GAGE10A6NGK3 116 aa11.58□□□□□ -0.55
EPHB4-204ENST00000477446 H3BUT2 72 aa11.58□□□□□ -0.55
EPHB4-204ENST00000477446 UBE2L6O14933 153 aa11.58□□□□□ -0.55
EPHB4-204ENST00000477446 CCL18P55774 89 aa11.58□□□□□ -0.55
EPHB4-204ENST00000477446 TSPEAR-AS2P59090 65 aa11.58□□□□□ -0.55
EPHB4-204ENST00000477446 LINC00476Q8WZB0 136 aa11.58□□□□□ -0.55
EPHB4-204ENST00000477446 RAB37Q96AX2 223 aa11.58□□□□□ -0.55
EPHB4-204ENST00000477446 TMEM101Q96IK0 257 aa11.58□□□□□ -0.55
EPHB4-204ENST00000477446 LINC00588Q9Y4M8 146 aa11.58□□□□□ -0.55
EPHB4-204ENST00000477446 HERVK_113P63121 156 aa11.58□□□□□ -0.56
EPHB4-204ENST00000477446 A0A1W2PPM0 123 aa11.57□□□□□ -0.56
EPHB4-204ENST00000477446 LY6G6CO95867 125 aa11.57□□□□□ -0.56
EPHB4-204ENST00000477446 IGHV3-30-3P0DP02 117 aa11.57□□□□□ -0.56
EPHB4-204ENST00000477446 FABP2P12104 132 aa11.57□□□□□ -0.56
EPHB4-204ENST00000477446 UBE2DNLQ8IWF7 75 aa11.57□□□□□ -0.56
EPHB4-204ENST00000477446 K7EP13 123 aa11.56□□□□□ -0.56
EPHB4-204ENST00000477446 CDC42SE2Q9NRR3 84 aa11.56□□□□□ -0.56
EPHB4-204ENST00000477446 RNASE13Q5GAN3 156 aaKnown RBP11.55□□□□□ -0.56
EPHB4-204ENST00000477446 TMEM238C9JI98 176 aa11.54□□□□□ -0.56
EPHB4-204ENST00000477446 TRBV6-8A0A0A6YYG3 113 aa11.54□□□□□ -0.56
EPHB4-204ENST00000477446 LCE6AA0A183 80 aa11.54□□□□□ -0.56
EPHB4-204ENST00000477446 K7EP34 96 aa11.54□□□□□ -0.56
EPHB4-204ENST00000477446 IGHV3-30P01768 117 aa11.53□□□□□ -0.56
EPHB4-204ENST00000477446 IGHV3-30-5P0DP03 117 aa11.53□□□□□ -0.56
EPHB4-204ENST00000477446 LINC00242Q5T6M2 205 aa11.52□□□□□ -0.57
EPHB4-204ENST00000477446 ALMS1Q8TCU4 4167 aa11.51□□□□□ -0.57
EPHB4-204ENST00000477446 K7ERJ3 54 aa11.51□□□□□ -0.57
EPHB4-204ENST00000477446 LELP1Q5T871 98 aa11.51□□□□□ -0.57
EPHB4-204ENST00000477446 UPK3BQ9BT76 320 aa11.51□□□□□ -0.57
EPHB4-204ENST00000477446 NDUFA12Q9UI09 145 aa11.51□□□□□ -0.57
EPHB4-204ENST00000477446 SPCS1Q9Y6A9 102 aa11.51□□□□□ -0.57
EPHB4-204ENST00000477446 IGHV3-64A0A075B6Q5 118 aa11.5□□□□□ -0.57
EPHB4-204ENST00000477446 A0A0J9YXY3 114 aa11.5□□□□□ -0.57
EPHB4-204ENST00000477446 CDKN2A-AS1Q9UH64 79 aa11.5□□□□□ -0.57
EPHB4-204ENST00000477446 TRAV8-3A0A0A6YYJ7 113 aa11.5□□□□□ -0.57
EPHB4-204ENST00000477446 TIMM17BO60830 172 aa11.5□□□□□ -0.57
EPHB4-204ENST00000477446 RPL24P83731 157 aaKnown RBP11.5□□□□□ -0.57
EPHB4-204ENST00000477446 IGLV5-39A0A0G2JS06 123 aa11.49□□□□□ -0.57
EPHB4-204ENST00000477446 SPINK8P0C7L1 97 aa11.49□□□□□ -0.57
EPHB4-204ENST00000477446 WFDC10BQ8IUB3 73 aa11.49□□□□□ -0.57
EPHB4-204ENST00000477446 C10orf126Q8N4M7 172 aa11.49□□□□□ -0.57
EPHB4-204ENST00000477446 Q9H8V8 135 aa11.49□□□□□ -0.57
EPHB4-204ENST00000477446 VPS13DQ5THJ4 4388 aa11.48□□□□□ -0.57
EPHB4-204ENST00000477446 KMT2CQ8NEZ4 4911 aaKnown RBP11.48□□□□□ -0.57
EPHB4-204ENST00000477446 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.47□□□□□ -0.57
EPHB4-204ENST00000477446 NDUFA1O15239 70 aa11.47□□□□□ -0.57
EPHB4-204ENST00000477446 COX6A2Q02221 97 aa11.47□□□□□ -0.57
EPHB4-204ENST00000477446 CHCHD5Q9BSY4 110 aa11.47□□□□□ -0.57
EPHB4-204ENST00000477446 SPANXDQ9BXN6 97 aa11.47□□□□□ -0.57
EPHB4-204ENST00000477446 SPANXCQ9NY87 97 aa11.47□□□□□ -0.57
EPHB4-204ENST00000477446 DNAH1Q9P2D7 4330 aa11.47□□□□□ -0.57
EPHB4-204ENST00000477446 TRAV13-1A0A0B4J241 112 aa11.46□□□□□ -0.57
EPHB4-204ENST00000477446 NAA38Q9BRA0 125 aaKnown RBP11.46□□□□□ -0.57
EPHB4-204ENST00000477446 GAGE6Q13070 117 aa11.45□□□□□ -0.58
EPHB4-204ENST00000477446 CIRBPQ14011 172 aaKnown RBP11.45□□□□□ -0.58
EPHB4-204ENST00000477446 LYRM7Q5U5X0 104 aa11.45□□□□□ -0.58
EPHB4-204ENST00000477446 A0A1B0GUV1 79 aa11.45□□□□□ -0.58
EPHB4-204ENST00000477446 HYDINQ4G0P3 5121 aa11.44□□□□□ -0.58
EPHB4-204ENST00000477446 IFITM1P13164 125 aa11.44□□□□□ -0.58
EPHB4-204ENST00000477446 PGPEP1Q9NXJ5 209 aa11.44□□□□□ -0.58
EPHB4-204ENST00000477446 SACSQ9NZJ4 4579 aa11.44□□□□□ -0.58
EPHB4-204ENST00000477446 A0A0B4J2C4 111 aa11.43□□□□□ -0.58
EPHB4-204ENST00000477446 CFC1BP0CG36 223 aa11.43□□□□□ -0.58
EPHB4-204ENST00000477446 CFC1P0CG37 223 aa11.43□□□□□ -0.58
EPHB4-204ENST00000477446 MUSTN1Q8IVN3 82 aa11.43□□□□□ -0.58
EPHB4-204ENST00000477446 LITAFQ99732 161 aa11.43□□□□□ -0.58
EPHB4-204ENST00000477446 PRO1854Q9UHT4 67 aa11.43□□□□□ -0.58
EPHB4-204ENST00000477446 KMT2AQ03164 3969 aa11.43□□□□□ -0.58
EPHB4-204ENST00000477446 SMIM1B2RUZ4 78 aa11.42□□□□□ -0.58
EPHB4-204ENST00000477446 APOMO95445 188 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms