RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 MYMXA0A1B0GTQ4 84 aa2.74□□□□□ -1.97
NUP58-209ENST00000476553 M0R135 149 aa2.74□□□□□ -1.97
NUP58-209ENST00000476553 FXYD1O00168 92 aa2.74□□□□□ -1.97
NUP58-209ENST00000476553 ARMS2P0C7Q2 107 aa2.74□□□□□ -1.97
NUP58-209ENST00000476553 COL5A1P20908 1838 aaPredicted RBP2.73□□□□□ -1.97
NUP58-209ENST00000476553 MADDQ8WXG6 1647 aa2.73□□□□□ -1.97
NUP58-209ENST00000476553 C7orf77A4D0Y5 90 aa2.73□□□□□ -1.97
NUP58-209ENST00000476553 BAGE2Q86Y30 109 aa2.73□□□□□ -1.97
NUP58-209ENST00000476553 TET1Q8NFU7 2136 aa2.73□□□□□ -1.97
NUP58-209ENST00000476553 PRR15LQ9BU68 103 aa2.73□□□□□ -1.97
NUP58-209ENST00000476553 HFM1A2PYH4 1435 aa2.73□□□□□ -1.97
NUP58-209ENST00000476553 PRRC2BQ5JSZ5 2229 aaKnown RBP2.73□□□□□ -1.97
NUP58-209ENST00000476553 UQCR11O14957 56 aa2.72□□□□□ -1.97
NUP58-209ENST00000476553 DEFB121Q5J5C9 76 aa2.72□□□□□ -1.97
NUP58-209ENST00000476553 BAGE3Q86Y29 109 aa2.72□□□□□ -1.97
NUP58-209ENST00000476553 ICE1Q9Y2F5 2266 aa2.72□□□□□ -1.97
NUP58-209ENST00000476553 EFCAB5A4FU69 1503 aa2.72□□□□□ -1.97
NUP58-209ENST00000476553 A0A1B0GWA3 101 aa2.71□□□□□ -1.98
NUP58-209ENST00000476553 LEPROTL1O95214 131 aa2.71□□□□□ -1.98
NUP58-209ENST00000476553 PLGLAQ15195 96 aa2.71□□□□□ -1.98
NUP58-209ENST00000476553 ARFGEF2Q9Y6D5 1785 aa2.71□□□□□ -1.98
NUP58-209ENST00000476553 CTXND1A0A1B0GTU2 59 aa2.7□□□□□ -1.98
NUP58-209ENST00000476553 UMAD1C9J7I0 102 aa2.7□□□□□ -1.98
NUP58-209ENST00000476553 CAV3P56539 151 aa2.7□□□□□ -1.98
NUP58-209ENST00000476553 Q6ZQY7 126 aa2.7□□□□□ -1.98
NUP58-209ENST00000476553 Q96NJ1 140 aa2.7□□□□□ -1.98
NUP58-209ENST00000476553 CEBPZOSA8MTT3 80 aa2.69□□□□□ -1.98
NUP58-209ENST00000476553 M0R3E3 92 aa2.69□□□□□ -1.98
NUP58-209ENST00000476553 MYO7BQ6PIF6 2116 aa2.69□□□□□ -1.98
NUP58-209ENST00000476553 RGPD1P0DJD0 1748 aa2.68□□□□□ -1.98
NUP58-209ENST00000476553 D6R8Y8 96 aa2.68□□□□□ -1.98
NUP58-209ENST00000476553 J3QRE1 110 aa2.68□□□□□ -1.98
NUP58-209ENST00000476553 MGPP08493 103 aa2.68□□□□□ -1.98
NUP58-209ENST00000476553 MUSTN1Q8IVN3 82 aa2.68□□□□□ -1.98
NUP58-209ENST00000476553 OBSCN-AS1Q96MR7 158 aa2.68□□□□□ -1.98
NUP58-209ENST00000476553 CCL19Q99731 98 aa2.68□□□□□ -1.98
NUP58-209ENST00000476553 A0A087WWC5 75 aa2.67□□□□□ -1.98
NUP58-209ENST00000476553 TRGV1A0A0A0MS02 117 aa2.67□□□□□ -1.98
NUP58-209ENST00000476553 IGKV4-1P06312 121 aa2.67□□□□□ -1.98
NUP58-209ENST00000476553 SPINT3P49223 89 aa2.67□□□□□ -1.98
NUP58-209ENST00000476553 ZNF137PP52743 207 aa2.67□□□□□ -1.98
NUP58-209ENST00000476553 KRTAP13-4Q3LI77 160 aa2.67□□□□□ -1.98
NUP58-209ENST00000476553 NUP188Q5SRE5 1749 aa2.67□□□□□ -1.98
NUP58-209ENST00000476553 EEA1Q15075 1411 aa2.67□□□□□ -1.98
NUP58-209ENST00000476553 TRAV1-2A0A0B4J238 106 aa2.66□□□□□ -1.98
NUP58-209ENST00000476553 UNQ6190/PRO20217Q6UXQ8 127 aa2.66□□□□□ -1.98
NUP58-209ENST00000476553 BRD3OSQ6XYD6 125 aa2.66□□□□□ -1.98
NUP58-209ENST00000476553 TARBP1Q13395 1621 aaKnown RBP2.66□□□□□ -1.98
NUP58-209ENST00000476553 IFT172Q9UG01 1749 aa2.65□□□□□ -1.98
NUP58-209ENST00000476553 A0A087WVE0 104 aa2.65□□□□□ -1.99
NUP58-209ENST00000476553 SPRR4Q96PI1 79 aa2.65□□□□□ -1.99
NUP58-209ENST00000476553 PROK2Q9HC23 129 aa2.65□□□□□ -1.99
NUP58-209ENST00000476553 LINC00846Q9NV44 126 aa2.65□□□□□ -1.99
NUP58-209ENST00000476553 ZNF236Q9UL36 1845 aa2.65□□□□□ -1.99
NUP58-209ENST00000476553 ITSN1Q15811 1721 aa2.65□□□□□ -1.99
NUP58-209ENST00000476553 DEFB103AP81534 67 aa2.64□□□□□ -1.99
NUP58-209ENST00000476553 COX17Q14061 63 aa2.64□□□□□ -1.99
NUP58-209ENST00000476553 Q6JHZ5 121 aa2.64□□□□□ -1.99
NUP58-209ENST00000476553 FDCSPQ8NFU4 85 aa2.64□□□□□ -1.99
NUP58-209ENST00000476553 SMIM4Q8WVI0 70 aa2.64□□□□□ -1.99
NUP58-209ENST00000476553 INTS1Q8N201 2190 aaKnown RBP2.64□□□□□ -1.99
NUP58-209ENST00000476553 CRYBG1Q9Y4K1 1723 aa2.63□□□□□ -1.99
NUP58-209ENST00000476553 ACYP2P14621 99 aa2.63□□□□□ -1.99
NUP58-209ENST00000476553 C6orf201Q7Z4U5 140 aa2.63□□□□□ -1.99
NUP58-209ENST00000476553 ZMYM4Q5VZL5 1548 aa2.63□□□□□ -1.99
NUP58-209ENST00000476553 RAPGEF6Q8TEU7 1601 aa2.62□□□□□ -1.99
NUP58-209ENST00000476553 C10orf99Q6UWK7 81 aa2.62□□□□□ -1.99
NUP58-209ENST00000476553 UBE2D4Q9Y2X8 147 aa2.62□□□□□ -1.99
NUP58-209ENST00000476553 E9PCH4 1651 aa2.61□□□□□ -1.99
NUP58-209ENST00000476553 ATP5EP2Q5VTU8 51 aa2.61□□□□□ -1.99
NUP58-209ENST00000476553 ASXL1Q8IXJ9 1541 aa2.61□□□□□ -1.99
NUP58-209ENST00000476553 CACNA1GO43497 2377 aa2.6□□□□□ -1.99
NUP58-209ENST00000476553 COL4A1P02462 1669 aa2.6□□□□□ -1.99
NUP58-209ENST00000476553 SHPRHQ149N8 1683 aa2.6□□□□□ -1.99
NUP58-209ENST00000476553 GCHFRP30047 84 aa2.6□□□□□ -1.99
NUP58-209ENST00000476553 LINC00472Q9H8W2 130 aa2.6□□□□□ -1.99
NUP58-209ENST00000476553 PLAC8Q9NZF1 115 aa2.6□□□□□ -1.99
NUP58-209ENST00000476553 TIAM1Q13009 1591 aa2.6□□□□□ -1.99
NUP58-209ENST00000476553 PREX2Q70Z35 1606 aa2.6□□□□□ -1.99
NUP58-209ENST00000476553 CCDC180Q9P1Z9 1646 aa2.6□□□□□ -1.99
NUP58-209ENST00000476553 ALKQ9UM73 1620 aa2.6□□□□□ -1.99
NUP58-209ENST00000476553 VWDEQ8N2E2 1590 aa2.59□□□□□ -1.99
NUP58-209ENST00000476553 ZCCHC13Q8WW36 166 aaKnown RBP2.59□□□□□ -1.99
NUP58-209ENST00000476553 ANKRD36A6QL64 1941 aa2.59□□□□□ -1.99
NUP58-209ENST00000476553 NKTRP30414 1462 aaKnown RBP2.58□□□□□ -2
NUP58-209ENST00000476553 ATP7BP35670 1465 aa2.58□□□□□ -2
NUP58-209ENST00000476553 CEP170BQ9Y4F5 1589 aaPredicted RBP2.58□□□□□ -2
NUP58-209ENST00000476553 TRBV30A0A0K0K1B3 111 aa2.58□□□□□ -2
NUP58-209ENST00000476553 SDK1Q7Z5N4 2213 aa2.57□□□□□ -2
NUP58-209ENST00000476553 MAP2P11137 1827 aaKnown RBP2.57□□□□□ -2
NUP58-209ENST00000476553 COX8AP10176 69 aa2.57□□□□□ -2
NUP58-209ENST00000476553 IFI27P40305 119 aaPredicted RBP2.57□□□□□ -2
NUP58-209ENST00000476553 DEFB107AQ8IZN7 70 aa2.57□□□□□ -2
NUP58-209ENST00000476553 ABCA10Q8WWZ4 1543 aa2.57□□□□□ -2
NUP58-209ENST00000476553 PIK3C2BO00750 1634 aa2.57□□□□□ -2
NUP58-209ENST00000476553 C5P01031 1676 aa2.57□□□□□ -2
NUP58-209ENST00000476553 NCOA6Q14686 2063 aaPredicted RBP2.56□□□□□ -2
NUP58-209ENST00000476553 MED13LQ71F56 2210 aa2.56□□□□□ -2
NUP58-209ENST00000476553 TRBV7-4A0A0J9YYF1 115 aa2.56□□□□□ -2
NUP58-209ENST00000476553 PCOTHQ58A44 107 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms