RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 Q6ZSA8 131 aa4.33□□□□□ -1.72
CLDN4-205ENST00000476494 NTM-AS1Q6ZSK4 140 aa4.33□□□□□ -1.72
CLDN4-205ENST00000476494 TMEM101Q96IK0 257 aa4.33□□□□□ -1.72
CLDN4-205ENST00000476494 VCX2Q9H322 139 aa4.33□□□□□ -1.72
CLDN4-205ENST00000476494 TRAV8-6A0A0B4J262 113 aa4.32□□□□□ -1.72
CLDN4-205ENST00000476494 A0A1B0GUV1 79 aa4.32□□□□□ -1.72
CLDN4-205ENST00000476494 FGF6P10767 208 aa4.32□□□□□ -1.72
CLDN4-205ENST00000476494 HNRNPA3P51991 378 aaKnown RBP4.32□□□□□ -1.72
CLDN4-205ENST00000476494 RPL39P62891 51 aaKnown RBP4.32□□□□□ -1.72
CLDN4-205ENST00000476494 PMVKQ15126 192 aa4.32□□□□□ -1.72
CLDN4-205ENST00000476494 LINC01545Q5VT33 79 aa4.32□□□□□ -1.72
CLDN4-205ENST00000476494 AMMECR1LQ6DCA0 310 aa4.32□□□□□ -1.72
CLDN4-205ENST00000476494 LYPD5Q6UWN5 251 aa4.32□□□□□ -1.72
CLDN4-205ENST00000476494 OR5A1Q8NGJ0 315 aa4.32□□□□□ -1.72
CLDN4-205ENST00000476494 CHCHD5Q9BSY4 110 aa4.32□□□□□ -1.72
CLDN4-205ENST00000476494 UBE2D4Q9Y2X8 147 aa4.32□□□□□ -1.72
CLDN4-205ENST00000476494 IGLV4-3A0A075B6K6 122 aa4.31□□□□□ -1.72
CLDN4-205ENST00000476494 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.31□□□□□ -1.72
CLDN4-205ENST00000476494 A0A087WX48 190 aa4.31□□□□□ -1.72
CLDN4-205ENST00000476494 IGKV2-29A2NJV5 120 aaPredicted RBP4.31□□□□□ -1.72
CLDN4-205ENST00000476494 CCL25O15444 150 aa4.31□□□□□ -1.72
CLDN4-205ENST00000476494 PLNP26678 52 aa4.31□□□□□ -1.72
CLDN4-205ENST00000476494 CCL18P55774 89 aa4.31□□□□□ -1.72
CLDN4-205ENST00000476494 SEC11AP67812 179 aa4.31□□□□□ -1.72
CLDN4-205ENST00000476494 S100A12P80511 92 aa4.31□□□□□ -1.72
CLDN4-205ENST00000476494 PYY3Q5JQD4 70 aa4.31□□□□□ -1.72
CLDN4-205ENST00000476494 TEX43Q6ZNM6 134 aa4.31□□□□□ -1.72
CLDN4-205ENST00000476494 LINC00173Q6ZV60 143 aa4.31□□□□□ -1.72
CLDN4-205ENST00000476494 BAALCQ8WXS3 180 aa4.31□□□□□ -1.72
CLDN4-205ENST00000476494 C2orf88Q9BSF0 95 aa4.31□□□□□ -1.72
CLDN4-205ENST00000476494 UPK3BQ9BT76 320 aa4.31□□□□□ -1.72
CLDN4-205ENST00000476494 CST9LQ9H4G1 147 aa4.31□□□□□ -1.72
CLDN4-205ENST00000476494 TMEM262E9PQX1 116 aa4.3□□□□□ -1.72
CLDN4-205ENST00000476494 F8VRH5 84 aa4.3□□□□□ -1.72
CLDN4-205ENST00000476494 EREGO14944 169 aa4.3□□□□□ -1.72
CLDN4-205ENST00000476494 DPM2O94777 84 aa4.3□□□□□ -1.72
CLDN4-205ENST00000476494 ODF1Q14990 250 aa4.3□□□□□ -1.72
CLDN4-205ENST00000476494 ZNF664Q8N3J9 261 aa4.3□□□□□ -1.72
CLDN4-205ENST00000476494 AMELXQ99217 191 aa4.3□□□□□ -1.72
CLDN4-205ENST00000476494 CDC42SE2Q9NRR3 84 aa4.3□□□□□ -1.72
CLDN4-205ENST00000476494 CHTOPQ9Y3Y2 248 aaKnown RBP4.3□□□□□ -1.72
CLDN4-205ENST00000476494 HSBP1L1C9JCN9 74 aa4.29□□□□□ -1.72
CLDN4-205ENST00000476494 H0Y8G0 127 aa4.29□□□□□ -1.72
CLDN4-205ENST00000476494 K7EP13 123 aa4.29□□□□□ -1.72
CLDN4-205ENST00000476494 IGKCP01834 107 aa4.29□□□□□ -1.72
CLDN4-205ENST00000476494 GAGE6Q13070 117 aa4.29□□□□□ -1.72
CLDN4-205ENST00000476494 FAM19A3Q7Z5A8 133 aa4.29□□□□□ -1.72
CLDN4-205ENST00000476494 LINC00518Q8N0U6 118 aa4.29□□□□□ -1.72
CLDN4-205ENST00000476494 Q8N976 141 aa4.29□□□□□ -1.72
CLDN4-205ENST00000476494 TRAV9-2A0A087WT02 112 aa4.28□□□□□ -1.72
CLDN4-205ENST00000476494 KRTAP9-7A8MTY7 169 aa4.28□□□□□ -1.72
CLDN4-205ENST00000476494 RBX1P62877 108 aa4.28□□□□□ -1.72
CLDN4-205ENST00000476494 ESRGQ1W209 222 aa4.28□□□□□ -1.72
CLDN4-205ENST00000476494 NFE4Q86UQ8 179 aa4.28□□□□□ -1.72
CLDN4-205ENST00000476494 C12orf57Q99622 126 aa4.28□□□□□ -1.72
CLDN4-205ENST00000476494 VAMP8Q9BV40 100 aa4.28□□□□□ -1.72
CLDN4-205ENST00000476494 MRPL35Q9NZE8 188 aaKnown RBP4.28□□□□□ -1.72
CLDN4-205ENST00000476494 MRPS16Q9Y3D3 137 aaKnown RBP4.28□□□□□ -1.72
CLDN4-205ENST00000476494 TINCRA0A1B0GVN0 87 aa4.27□□□□□ -1.73
CLDN4-205ENST00000476494 IGLC3P0DOY3 106 aa4.27□□□□□ -1.73
CLDN4-205ENST00000476494 HERVK_113P63121 156 aa4.27□□□□□ -1.73
CLDN4-205ENST00000476494 Q6ZUT4 128 aa4.27□□□□□ -1.73
CLDN4-205ENST00000476494 FAM104AQ969W3 186 aa4.27□□□□□ -1.73
CLDN4-205ENST00000476494 OPRPNQ99935 248 aaPredicted RBP4.27□□□□□ -1.73
CLDN4-205ENST00000476494 GEMIN7Q9H840 131 aaKnown RBP4.27□□□□□ -1.73
CLDN4-205ENST00000476494 TRAV8-4A0A0B4J246 113 aa4.26□□□□□ -1.73
CLDN4-205ENST00000476494 C11orf86A6NJI1 115 aa4.26□□□□□ -1.73
CLDN4-205ENST00000476494 H3BRM9 83 aa4.26□□□□□ -1.73
CLDN4-205ENST00000476494 UBE2D1P51668 147 aa4.26□□□□□ -1.73
CLDN4-205ENST00000476494 HERVK_113P61574 105 aa4.26□□□□□ -1.73
CLDN4-205ENST00000476494 SS18Q15532 418 aa4.26□□□□□ -1.73
CLDN4-205ENST00000476494 MPV17L2Q567V2 206 aa4.26□□□□□ -1.73
CLDN4-205ENST00000476494 LINC01556Q5JQF7 62 aa4.26□□□□□ -1.73
CLDN4-205ENST00000476494 IGLV4-69A0A075B6H9 119 aa4.25□□□□□ -1.73
CLDN4-205ENST00000476494 IGLV4-60A0A075B6I1 120 aa4.25□□□□□ -1.73
CLDN4-205ENST00000476494 IGLV5-45A0A087WSX0 123 aa4.25□□□□□ -1.73
CLDN4-205ENST00000476494 A0A0J9YXV3 536 aa4.25□□□□□ -1.73
CLDN4-205ENST00000476494 LRCOL1A6NCL2 159 aa4.25□□□□□ -1.73
CLDN4-205ENST00000476494 SIVA1O15304 175 aa4.25□□□□□ -1.73
CLDN4-205ENST00000476494 ANGP03950 147 aaKnown RBP4.25□□□□□ -1.73
CLDN4-205ENST00000476494 TMEM170BQ5T4T1 132 aa4.25□□□□□ -1.73
CLDN4-205ENST00000476494 ZC2HC1BQ5TFG8 222 aa4.25□□□□□ -1.73
CLDN4-205ENST00000476494 LINC01561Q8N1V8 128 aa4.25□□□□□ -1.73
CLDN4-205ENST00000476494 LINC00269Q8N2A0 174 aa4.25□□□□□ -1.73
CLDN4-205ENST00000476494 C10orf126Q8N4M7 172 aa4.25□□□□□ -1.73
CLDN4-205ENST00000476494 PMCHL2Q9BQD1 86 aa4.25□□□□□ -1.73
CLDN4-205ENST00000476494 CHAC1Q9BUX1 264 aa4.25□□□□□ -1.73
CLDN4-205ENST00000476494 PRR34Q9NV39 138 aa4.25□□□□□ -1.73
CLDN4-205ENST00000476494 IGLV5-52A0A0A0MRZ9 124 aa4.24□□□□□ -1.73
CLDN4-205ENST00000476494 TRAV13-1A0A0B4J241 112 aa4.24□□□□□ -1.73
CLDN4-205ENST00000476494 LINC00959A0A1B0GUT2 108 aa4.24□□□□□ -1.73
CLDN4-205ENST00000476494 TSTD3H0UI37 97 aa4.24□□□□□ -1.73
CLDN4-205ENST00000476494 CRPP02741 224 aa4.24□□□□□ -1.73
CLDN4-205ENST00000476494 REG3AQ06141 175 aa4.24□□□□□ -1.73
CLDN4-205ENST00000476494 MIAQ16674 131 aa4.24□□□□□ -1.73
CLDN4-205ENST00000476494 SPATA45Q537H7 98 aa4.24□□□□□ -1.73
CLDN4-205ENST00000476494 LINC00242Q5T6M2 205 aa4.24□□□□□ -1.73
CLDN4-205ENST00000476494 SCXQ7RTU7 201 aa4.24□□□□□ -1.73
CLDN4-205ENST00000476494 WFDC10BQ8IUB3 73 aa4.24□□□□□ -1.73
CLDN4-205ENST00000476494 ATOH7Q8N100 152 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms