RNA–Protein interactions for RNA: ENST00000476089.1

ITGA4-207, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,846 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-207ENST00000476089 TRAV10A0A0B4J240 114 aa14.1□□□□□ -0.15
ITGA4-207ENST00000476089 GCSHP23434 173 aa14.1□□□□□ -0.15
ITGA4-207ENST00000476089 SS18Q15532 418 aa14.1□□□□□ -0.15
ITGA4-207ENST00000476089 LINC00959A0A1B0GUT2 108 aa14.09□□□□□ -0.15
ITGA4-207ENST00000476089 ANGP03950 147 aaKnown RBP14.08□□□□□ -0.15
ITGA4-207ENST00000476089 A6NDN8 102 aa14.08□□□□□ -0.16
ITGA4-207ENST00000476089 CEND1Q8N111 149 aa14.08□□□□□ -0.16
ITGA4-207ENST00000476089 A0A1B0GV90 55 aa14.07□□□□□ -0.16
ITGA4-207ENST00000476089 CCL25O15444 150 aa14.07□□□□□ -0.16
ITGA4-207ENST00000476089 SRSF9Q13242 221 aaKnown RBP eCLIP14.07□□□□□ -0.16
ITGA4-207ENST00000476089 NDUFA12Q9UI09 145 aa14.07□□□□□ -0.16
ITGA4-207ENST00000476089 SMIM1B2RUZ4 78 aa14.06□□□□□ -0.16
ITGA4-207ENST00000476089 PTTG1IPP53801 180 aa14.06□□□□□ -0.16
ITGA4-207ENST00000476089 LINC00269Q8N2A0 174 aa14.06□□□□□ -0.16
ITGA4-207ENST00000476089 IGLV5-39A0A0G2JS06 123 aa14.06□□□□□ -0.16
ITGA4-207ENST00000476089 ZFAND6Q6FIF0 208 aa14.06□□□□□ -0.16
ITGA4-207ENST00000476089 CLPSL2Q6UWE3 100 aa14.06□□□□□ -0.16
ITGA4-207ENST00000476089 B9D2Q9BPU9 175 aa14.06□□□□□ -0.16
ITGA4-207ENST00000476089 TM2D2Q9BX73 214 aa14.05□□□□□ -0.16
ITGA4-207ENST00000476089 IGHV3OR16-9A0A0B4J2B5 98 aa14.04□□□□□ -0.16
ITGA4-207ENST00000476089 REG3AQ06141 175 aa14.04□□□□□ -0.16
ITGA4-207ENST00000476089 Q8N3U1 123 aa14.03□□□□□ -0.16
ITGA4-207ENST00000476089 SPANXB1Q9NS25 103 aaPredicted RBP14.03□□□□□ -0.16
ITGA4-207ENST00000476089 A0A0J9YXY3 114 aa14.02□□□□□ -0.16
ITGA4-207ENST00000476089 XCL1P47992 114 aa14.02□□□□□ -0.16
ITGA4-207ENST00000476089 FXYD2P54710 66 aa14.02□□□□□ -0.16
ITGA4-207ENST00000476089 C10orf126Q8N4M7 172 aa14.02□□□□□ -0.16
ITGA4-207ENST00000476089 C15orf53Q8NAA6 179 aa14.02□□□□□ -0.16
ITGA4-207ENST00000476089 A0A087WZ39 114 aa14.01□□□□□ -0.17
ITGA4-207ENST00000476089 TMEM238C9JI98 176 aa14.01□□□□□ -0.17
ITGA4-207ENST00000476089 NDUFA1O15239 70 aa14.01□□□□□ -0.17
ITGA4-207ENST00000476089 ESRGQ1W209 222 aa14□□□□□ -0.17
ITGA4-207ENST00000476089 C5orf38Q86SI9 138 aa13.99□□□□□ -0.17
ITGA4-207ENST00000476089 KLK12Q9UKR0 248 aa13.99□□□□□ -0.17
ITGA4-207ENST00000476089 IGHV3-30P01768 117 aa13.98□□□□□ -0.17
ITGA4-207ENST00000476089 IGHV3-33P01772 117 aa13.98□□□□□ -0.17
ITGA4-207ENST00000476089 IGHV3-30-5P0DP03 117 aa13.98□□□□□ -0.17
ITGA4-207ENST00000476089 Q9H8V8 135 aa13.98□□□□□ -0.17
ITGA4-207ENST00000476089 TMEM238LA0A1B0GVL6 79 aa13.97□□□□□ -0.17
ITGA4-207ENST00000476089 A6NJY4 79 aa13.97□□□□□ -0.17
ITGA4-207ENST00000476089 K7EP13 123 aa13.97□□□□□ -0.17
ITGA4-207ENST00000476089 TAX1BP3O14907 124 aa13.97□□□□□ -0.17
ITGA4-207ENST00000476089 CD164L2Q6UWJ8 174 aa13.97□□□□□ -0.17
ITGA4-207ENST00000476089 WFDC10BQ8IUB3 73 aa13.97□□□□□ -0.17
ITGA4-207ENST00000476089 CHCHD10Q8WYQ3 142 aaPredicted RBP13.97□□□□□ -0.17
ITGA4-207ENST00000476089 SMIM13P0DJ93 91 aa13.97□□□□□ -0.17
ITGA4-207ENST00000476089 COX7B2Q8TF08 81 aa13.97□□□□□ -0.17
ITGA4-207ENST00000476089 NHP2Q9NX24 153 aaKnown RBP13.97□□□□□ -0.17
ITGA4-207ENST00000476089 TOMM7Q9P0U1 55 aa13.97□□□□□ -0.17
ITGA4-207ENST00000476089 COX11Q9Y6N1 276 aa13.96□□□□□ -0.17
ITGA4-207ENST00000476089 IGLV10-54A0A075B6I4 117 aa13.95□□□□□ -0.18
ITGA4-207ENST00000476089 CRPP02741 224 aa13.95□□□□□ -0.18
ITGA4-207ENST00000476089 CIRBPQ14011 172 aaKnown RBP13.95□□□□□ -0.18
ITGA4-207ENST00000476089 LINC01561Q8N1V8 128 aa13.95□□□□□ -0.18
ITGA4-207ENST00000476089 PRR34Q9NV39 138 aa13.95□□□□□ -0.18
ITGA4-207ENST00000476089 NHLRC4P0CG21 123 aaPredicted RBP13.94□□□□□ -0.18
ITGA4-207ENST00000476089 HERV-K104P63124 156 aa13.94□□□□□ -0.18
ITGA4-207ENST00000476089 COX7A2LO14548 114 aa13.94□□□□□ -0.18
ITGA4-207ENST00000476089 KRTAP21-3Q3LHN1 58 aa13.94□□□□□ -0.18
ITGA4-207ENST00000476089 HUWE1Q7Z6Z7 4374 aaKnown RBP13.93□□□□□ -0.18
ITGA4-207ENST00000476089 IGLL5B9A064 214 aa13.93□□□□□ -0.18
ITGA4-207ENST00000476089 TIMM17BO60830 172 aa13.93□□□□□ -0.18
ITGA4-207ENST00000476089 ZNF625Q96I27 306 aaPredicted RBP13.93□□□□□ -0.18
ITGA4-207ENST00000476089 Q6ZVH6 145 aa13.92□□□□□ -0.18
ITGA4-207ENST00000476089 RAB37Q96AX2 223 aa13.92□□□□□ -0.18
ITGA4-207ENST00000476089 PRSS2P07478 247 aa13.91□□□□□ -0.18
ITGA4-207ENST00000476089 MALP21145 153 aa13.91□□□□□ -0.18
ITGA4-207ENST00000476089 ENHOQ6UWT2 76 aa13.91□□□□□ -0.18
ITGA4-207ENST00000476089 UBE2WQ96B02 151 aa13.91□□□□□ -0.18
ITGA4-207ENST00000476089 LITAFQ99732 161 aa13.91□□□□□ -0.18
ITGA4-207ENST00000476089 SPANXDQ9BXN6 97 aa13.91□□□□□ -0.18
ITGA4-207ENST00000476089 SPANXCQ9NY87 97 aa13.91□□□□□ -0.18
ITGA4-207ENST00000476089 TRAV8-4A0A0B4J246 113 aa13.9□□□□□ -0.18
ITGA4-207ENST00000476089 RPL24P83731 157 aaKnown RBP13.9□□□□□ -0.18
ITGA4-207ENST00000476089 CCL18P55774 89 aa13.9□□□□□ -0.18
ITGA4-207ENST00000476089 C6orf226Q5I0X4 101 aa13.9□□□□□ -0.18
ITGA4-207ENST00000476089 LINC01556Q5JQF7 62 aa13.9□□□□□ -0.18
ITGA4-207ENST00000476089 MEIG1Q5JSS6 88 aa13.9□□□□□ -0.18
ITGA4-207ENST00000476089 SFTA2Q6UW10 78 aa13.9□□□□□ -0.18
ITGA4-207ENST00000476089 K7ERJ3 54 aa13.89□□□□□ -0.19
ITGA4-207ENST00000476089 MUSTN1Q8IVN3 82 aa13.89□□□□□ -0.19
ITGA4-207ENST00000476089 GAGE12HA6NDE8 117 aa13.88□□□□□ -0.19
ITGA4-207ENST00000476089 FOXI1Q12951 378 aa13.88□□□□□ -0.19
ITGA4-207ENST00000476089 MIAQ16674 131 aa13.88□□□□□ -0.19
ITGA4-207ENST00000476089 ADAMTSL4-AS1Q5T5F5 129 aa13.88□□□□□ -0.19
ITGA4-207ENST00000476089 A0A1B0GWB2 263 aa13.87□□□□□ -0.19
ITGA4-207ENST00000476089 C9orf118A6NHY6 69 aa13.87□□□□□ -0.19
ITGA4-207ENST00000476089 Q8IZM0 81 aa13.87□□□□□ -0.19
ITGA4-207ENST00000476089 APOMO95445 188 aa13.85□□□□□ -0.19
ITGA4-207ENST00000476089 LINC00588Q9Y4M8 146 aa13.85□□□□□ -0.19
ITGA4-207ENST00000476089 IFITM1P13164 125 aa13.85□□□□□ -0.19
ITGA4-207ENST00000476089 A4D1N5 150 aa13.84□□□□□ -0.19
ITGA4-207ENST00000476089 H3BUT2 72 aa13.84□□□□□ -0.19
ITGA4-207ENST00000476089 DNAH10OSP0CZ25 163 aa13.84□□□□□ -0.19
ITGA4-207ENST00000476089 VAMP3Q15836 100 aa13.84□□□□□ -0.19
ITGA4-207ENST00000476089 CFAP161Q6P656 301 aa13.84□□□□□ -0.19
ITGA4-207ENST00000476089 COPS9Q8WXC6 57 aa13.84□□□□□ -0.19
ITGA4-207ENST00000476089 A0A0U1RRA0 63 aa13.83□□□□□ -0.2
ITGA4-207ENST00000476089 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.83□□□□□ -0.2
ITGA4-207ENST00000476089 CKS1BP61024 79 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms