RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
TM9SF3-204ENST00000475401 ATP10BO94823 1461 aa1.18□□□□□ -2.22
TM9SF3-204ENST00000475401 IQSEC2Q5JU85 1478 aa1.18□□□□□ -2.22
TM9SF3-204ENST00000475401 NUP188Q5SRE5 1749 aa1.18□□□□□ -2.22
TM9SF3-204ENST00000475401 PLXNB2O15031 1838 aa1.17□□□□□ -2.22
TM9SF3-204ENST00000475401 PPLO60437 1756 aa1.17□□□□□ -2.22
TM9SF3-204ENST00000475401 KDM3BQ7LBC6 1761 aa1.17□□□□□ -2.22
TM9SF3-204ENST00000475401 PMCHL1Q16048 86 aa1.17□□□□□ -2.22
TM9SF3-204ENST00000475401 MYO7BQ6PIF6 2116 aa1.17□□□□□ -2.22
TM9SF3-204ENST00000475401 LCN9Q8WX39 176 aa1.17□□□□□ -2.22
TM9SF3-204ENST00000475401 UQCRHLA0A096LP55 91 aa1.16□□□□□ -2.22
TM9SF3-204ENST00000475401 BCE1O60756 84 aa1.16□□□□□ -2.22
TM9SF3-204ENST00000475401 UQCRHP07919 91 aa1.16□□□□□ -2.22
TM9SF3-204ENST00000475401 LINC00846Q9NV44 126 aa1.16□□□□□ -2.22
TM9SF3-204ENST00000475401 HIGD1BQ9P298 99 aa1.16□□□□□ -2.22
TM9SF3-204ENST00000475401 POLA1P09884 1462 aaPredicted RBP1.16□□□□□ -2.22
TM9SF3-204ENST00000475401 NLRP1Q9C000 1473 aa1.16□□□□□ -2.22
TM9SF3-204ENST00000475401 RGPD3A6NKT7 1758 aaPredicted RBP1.16□□□□□ -2.22
TM9SF3-204ENST00000475401 MYO3AQ8NEV4 1616 aa1.15□□□□□ -2.22
TM9SF3-204ENST00000475401 UBR1Q8IWV7 1749 aa1.15□□□□□ -2.22
TM9SF3-204ENST00000475401 WNK3Q9BYP7 1800 aa1.15□□□□□ -2.22
TM9SF3-204ENST00000475401 M0R3E3 92 aa1.15□□□□□ -2.23
TM9SF3-204ENST00000475401 KRTAP5-10Q6L8G5 202 aa1.15□□□□□ -2.23
TM9SF3-204ENST00000475401 TMEM263Q8WUH6 116 aaKnown RBP1.15□□□□□ -2.23
TM9SF3-204ENST00000475401 ARHGAP35Q9NRY4 1499 aa1.15□□□□□ -2.23
TM9SF3-204ENST00000475401 CCDC18Q5T9S5 1454 aa1.14□□□□□ -2.23
TM9SF3-204ENST00000475401 PLIN4Q96Q06 1357 aa1.14□□□□□ -2.23
TM9SF3-204ENST00000475401 A0A1B0GWA3 101 aa1.14□□□□□ -2.23
TM9SF3-204ENST00000475401 NMBP08949 121 aa1.14□□□□□ -2.23
TM9SF3-204ENST00000475401 ZFHX3Q15911 3703 aa1.14□□□□□ -2.23
TM9SF3-204ENST00000475401 ABCC2Q92887 1545 aa1.14□□□□□ -2.23
TM9SF3-204ENST00000475401 TDRG1Q3Y452 100 aa1.13□□□□□ -2.23
TM9SF3-204ENST00000475401 LAMC1P11047 1609 aa1.13□□□□□ -2.23
TM9SF3-204ENST00000475401 LRP6O75581 1613 aa1.12□□□□□ -2.23
TM9SF3-204ENST00000475401 PSMG4Q5JS54 123 aa1.12□□□□□ -2.23
TM9SF3-204ENST00000475401 LINC01600Q96MT4 127 aa1.12□□□□□ -2.23
TM9SF3-204ENST00000475401 FAM103A1Q9BTL3 118 aaKnown RBP1.12□□□□□ -2.23
TM9SF3-204ENST00000475401 PLAC8Q9NZF1 115 aa1.12□□□□□ -2.23
TM9SF3-204ENST00000475401 ASH1LQ9NR48 2969 aaKnown RBP1.12□□□□□ -2.23
TM9SF3-204ENST00000475401 EDC4Q6P2E9 1401 aaKnown RBP1.12□□□□□ -2.23
TM9SF3-204ENST00000475401 JMJD1CQ15652 2540 aa1.11□□□□□ -2.23
TM9SF3-204ENST00000475401 C7orf77A4D0Y5 90 aa1.11□□□□□ -2.23
TM9SF3-204ENST00000475401 ZNF815PA8K554 130 aa1.11□□□□□ -2.23
TM9SF3-204ENST00000475401 Q6JHZ5 121 aa1.11□□□□□ -2.23
TM9SF3-204ENST00000475401 S100A16Q96FQ6 103 aaKnown RBP1.11□□□□□ -2.23
TM9SF3-204ENST00000475401 MYO7AQ13402 2215 aa1.11□□□□□ -2.23
TM9SF3-204ENST00000475401 UACAQ9BZF9 1416 aa1.1□□□□□ -2.23
TM9SF3-204ENST00000475401 CYB5AP00167 134 aa1.1□□□□□ -2.23
TM9SF3-204ENST00000475401 ARMS2P0C7Q2 107 aa1.1□□□□□ -2.23
TM9SF3-204ENST00000475401 HMGN3Q15651 99 aa1.1□□□□□ -2.23
TM9SF3-204ENST00000475401 C10orf113Q5VZT2 155 aa1.1□□□□□ -2.23
TM9SF3-204ENST00000475401 UBE2DNLQ8IWF7 75 aa1.1□□□□□ -2.23
TM9SF3-204ENST00000475401 RABAC1Q9UI14 185 aa1.1□□□□□ -2.23
TM9SF3-204ENST00000475401 FBN2P35556 2912 aa1.1□□□□□ -2.23
TM9SF3-204ENST00000475401 MAGI2Q86UL8 1455 aa1.1□□□□□ -2.23
TM9SF3-204ENST00000475401 SHPRHQ149N8 1683 aa1.1□□□□□ -2.23
TM9SF3-204ENST00000475401 CACNA1CQ13936 2221 aa1.09□□□□□ -2.23
TM9SF3-204ENST00000475401 MYH4Q9Y623 1939 aa1.09□□□□□ -2.23
TM9SF3-204ENST00000475401 SPATA8Q6RVD6 105 aa1.09□□□□□ -2.23
TM9SF3-204ENST00000475401 C1orf167Q5SNV9 1468 aa1.09□□□□□ -2.24
TM9SF3-204ENST00000475401 CADP27708 2225 aa1.09□□□□□ -2.24
TM9SF3-204ENST00000475401 NAV3Q8IVL0 2385 aa1.08□□□□□ -2.24
TM9SF3-204ENST00000475401 TENM3Q9P273 2699 aa1.08□□□□□ -2.24
TM9SF3-204ENST00000475401 A0A087WVE0 104 aa1.08□□□□□ -2.24
TM9SF3-204ENST00000475401 PSENENQ9NZ42 101 aa1.08□□□□□ -2.24
TM9SF3-204ENST00000475401 KIF14Q15058 1648 aa1.07□□□□□ -2.24
TM9SF3-204ENST00000475401 MAP3K4Q9Y6R4 1608 aa1.07□□□□□ -2.24
TM9SF3-204ENST00000475401 F8WEM9 126 aa1.07□□□□□ -2.24
TM9SF3-204ENST00000475401 HAMPP81172 84 aa1.07□□□□□ -2.24
TM9SF3-204ENST00000475401 ETDBQ3ZM63 59 aa1.07□□□□□ -2.24
TM9SF3-204ENST00000475401 ZNF720Q7Z2F6 126 aa1.07□□□□□ -2.24
TM9SF3-204ENST00000475401 SSBP3-AS1Q7Z2R9 100 aa1.07□□□□□ -2.24
TM9SF3-204ENST00000475401 ZNF469Q96JG9 3925 aaPredicted RBP1.07□□□□□ -2.24
TM9SF3-204ENST00000475401 CUX1P39880 1505 aa1.06□□□□□ -2.24
TM9SF3-204ENST00000475401 KCPQ6ZWJ8 1503 aa1.06□□□□□ -2.24
TM9SF3-204ENST00000475401 PEA15Q15121 130 aa1.06□□□□□ -2.24
TM9SF3-204ENST00000475401 NHSL1Q5SYE7 1610 aa1.06□□□□□ -2.24
TM9SF3-204ENST00000475401 TARBP1Q13395 1621 aaKnown RBP1.05□□□□□ -2.24
TM9SF3-204ENST00000475401 HMGN2P05204 90 aaKnown RBP1.05□□□□□ -2.24
TM9SF3-204ENST00000475401 ALKAL2Q6UX46 152 aa1.05□□□□□ -2.24
TM9SF3-204ENST00000475401 KNDC1Q76NI1 1749 aa1.05□□□□□ -2.24
TM9SF3-204ENST00000475401 PAPPA2Q9BXP8 1791 aa1.05□□□□□ -2.24
TM9SF3-204ENST00000475401 NEXMIFQ5QGS0 1516 aa1.05□□□□□ -2.24
TM9SF3-204ENST00000475401 ASXL3Q9C0F0 2248 aa1.04□□□□□ -2.24
TM9SF3-204ENST00000475401 XRN1Q8IZH2 1706 aaKnown RBP1.04□□□□□ -2.24
TM9SF3-204ENST00000475401 SMIM11AP58511 58 aa1.04□□□□□ -2.24
TM9SF3-204ENST00000475401 FDCSPQ8NFU4 85 aa1.04□□□□□ -2.24
TM9SF3-204ENST00000475401 ERVK-7P63135 1459 aa1.04□□□□□ -2.24
TM9SF3-204ENST00000475401 ZNF462Q96JM2 2506 aa1.04□□□□□ -2.24
TM9SF3-204ENST00000475401 SNRPFP62306 86 aaKnown RBP1.03□□□□□ -2.24
TM9SF3-204ENST00000475401 NMSQ5H8A3 153 aa1.03□□□□□ -2.24
TM9SF3-204ENST00000475401 TULP4Q9NRJ4 1543 aa1.03□□□□□ -2.24
TM9SF3-204ENST00000475401 DIP2BQ9P265 1576 aa1.03□□□□□ -2.24
TM9SF3-204ENST00000475401 TRBV6-1A0A0K0K1D8 114 aa1.02□□□□□ -2.25
TM9SF3-204ENST00000475401 SPINK7P58062 85 aa1.02□□□□□ -2.25
TM9SF3-204ENST00000475401 ERCC6L2Q5T890 1561 aa1.02□□□□□ -2.25
TM9SF3-204ENST00000475401 CRYBG1Q9Y4K1 1723 aa1.02□□□□□ -2.25
TM9SF3-204ENST00000475401 TMEM131LA2VDJ0 1609 aa1.01□□□□□ -2.25
TM9SF3-204ENST00000475401 H3BQF6 201 aa1.01□□□□□ -2.25
TM9SF3-204ENST00000475401 A0A0G2JMZ2 1700 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms