RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 IGHV3-33P01772 117 aa5.39□□□□□ -1.55
CCDC171-205ENST00000472806 LINC00694P0DN24 101 aa5.39□□□□□ -1.55
CCDC171-205ENST00000472806 Q1RN00 199 aa5.39□□□□□ -1.55
CCDC171-205ENST00000472806 CITED1Q99966 193 aa5.39□□□□□ -1.55
CCDC171-205ENST00000472806 PRO0255Q9UI72 69 aa5.39□□□□□ -1.55
CCDC171-205ENST00000472806 EPG5Q9HCE0 2579 aa5.39□□□□□ -1.55
CCDC171-205ENST00000472806 TEX48A0A1B0GUV7 120 aa5.38□□□□□ -1.55
CCDC171-205ENST00000472806 SMIM1B2RUZ4 78 aa5.38□□□□□ -1.55
CCDC171-205ENST00000472806 M0QXV9 152 aa5.38□□□□□ -1.55
CCDC171-205ENST00000472806 DEFB130BP0DP73 79 aa5.38□□□□□ -1.55
CCDC171-205ENST00000472806 DEFB130AP0DP74 79 aa5.38□□□□□ -1.55
CCDC171-205ENST00000472806 ATXN8Q156A1 80 aa5.38□□□□□ -1.55
CCDC171-205ENST00000472806 LITAFQ99732 161 aa5.38□□□□□ -1.55
CCDC171-205ENST00000472806 CHCHD5Q9BSY4 110 aa5.38□□□□□ -1.55
CCDC171-205ENST00000472806 VPS13CQ709C8 3753 aa5.37□□□□□ -1.55
CCDC171-205ENST00000472806 APCP25054 2843 aa5.37□□□□□ -1.55
CCDC171-205ENST00000472806 ZFHX3Q15911 3703 aa5.37□□□□□ -1.55
CCDC171-205ENST00000472806 TRBV30A0A0K0K1B3 111 aa5.37□□□□□ -1.55
CCDC171-205ENST00000472806 SLPIP03973 132 aa5.37□□□□□ -1.55
CCDC171-205ENST00000472806 MIFP14174 115 aa5.37□□□□□ -1.55
CCDC171-205ENST00000472806 GAGE6Q13070 117 aa5.37□□□□□ -1.55
CCDC171-205ENST00000472806 MEIG1Q5JSS6 88 aa5.37□□□□□ -1.55
CCDC171-205ENST00000472806 SH2D6Q7Z4S9 175 aa5.37□□□□□ -1.55
CCDC171-205ENST00000472806 PRIMA1Q86XR5 153 aa5.37□□□□□ -1.55
CCDC171-205ENST00000472806 Q9H8V8 135 aa5.37□□□□□ -1.55
CCDC171-205ENST00000472806 X6R8D5 127 aa5.37□□□□□ -1.55
CCDC171-205ENST00000472806 LOC100131303A0A0U1RQF7 123 aa5.36□□□□□ -1.55
CCDC171-205ENST00000472806 A0A1B0GUV1 79 aa5.36□□□□□ -1.55
CCDC171-205ENST00000472806 GYPEP15421 78 aa5.36□□□□□ -1.55
CCDC171-205ENST00000472806 COX6A2Q02221 97 aa5.36□□□□□ -1.55
CCDC171-205ENST00000472806 WFDC2Q14508 124 aa5.36□□□□□ -1.55
CCDC171-205ENST00000472806 SS18Q15532 418 aa5.36□□□□□ -1.55
CCDC171-205ENST00000472806 LINC01561Q8N1V8 128 aa5.36□□□□□ -1.55
CCDC171-205ENST00000472806 WFDC9Q8NEX5 89 aa5.36□□□□□ -1.55
CCDC171-205ENST00000472806 COX7B2Q8TF08 81 aa5.36□□□□□ -1.55
CCDC171-205ENST00000472806 PRO0461Q9UI25 63 aa5.36□□□□□ -1.55
CCDC171-205ENST00000472806 TEX15Q9BXT5 2789 aa5.36□□□□□ -1.55
CCDC171-205ENST00000472806 HIVEP2P31629 2446 aa5.35□□□□□ -1.55
CCDC171-205ENST00000472806 TRAV26-1A0A087WT03 109 aa5.35□□□□□ -1.55
CCDC171-205ENST00000472806 F5H768 121 aa5.35□□□□□ -1.55
CCDC171-205ENST00000472806 TCL1BO95988 128 aa5.35□□□□□ -1.55
CCDC171-205ENST00000472806 DAD1P61803 113 aa5.35□□□□□ -1.55
CCDC171-205ENST00000472806 FAM222AQ5U5X8 452 aa5.35□□□□□ -1.55
CCDC171-205ENST00000472806 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.35□□□□□ -1.55
CCDC171-205ENST00000472806 CELSR1Q9NYQ6 3014 aa5.35□□□□□ -1.55
CCDC171-205ENST00000472806 CRYBG3Q68DQ2 2970 aa5.34□□□□□ -1.55
CCDC171-205ENST00000472806 KMT2BQ9UMN6 2715 aaPredicted RBP5.34□□□□□ -1.55
CCDC171-205ENST00000472806 FLNAP21333 2647 aaKnown RBP5.34□□□□□ -1.55
CCDC171-205ENST00000472806 A8MZ25 164 aa5.34□□□□□ -1.55
CCDC171-205ENST00000472806 H7C2G1 150 aa5.34□□□□□ -1.55
CCDC171-205ENST00000472806 ATP5G1P05496 136 aa5.34□□□□□ -1.55
CCDC171-205ENST00000472806 SPART-AS1P0CW21 52 aa5.34□□□□□ -1.55
CCDC171-205ENST00000472806 ETDBQ3ZM63 59 aa5.34□□□□□ -1.55
CCDC171-205ENST00000472806 ADAMTSL4-AS1Q5T5F5 129 aa5.34□□□□□ -1.55
CCDC171-205ENST00000472806 LINC00308Q8TCZ7 52 aa5.34□□□□□ -1.55
CCDC171-205ENST00000472806 PPDPFLQ8WWR9 84 aa5.34□□□□□ -1.55
CCDC171-205ENST00000472806 ZNF625Q96I27 306 aaPredicted RBP5.34□□□□□ -1.55
CCDC171-205ENST00000472806 ICOSQ9Y6W8 199 aa5.34□□□□□ -1.55
CCDC171-205ENST00000472806 MYO9AB2RTY4 2548 aa5.34□□□□□ -1.56
CCDC171-205ENST00000472806 SONP18583 2426 aaKnown RBP5.33□□□□□ -1.56
CCDC171-205ENST00000472806 CELSR2Q9HCU4 2923 aa5.33□□□□□ -1.56
CCDC171-205ENST00000472806 A0A087WZ39 114 aa5.33□□□□□ -1.56
CCDC171-205ENST00000472806 IGHV4-28A0A0C4DH34 117 aa5.33□□□□□ -1.56
CCDC171-205ENST00000472806 TMEM262E9PQX1 116 aa5.33□□□□□ -1.56
CCDC171-205ENST00000472806 RPL13AP40429 203 aaKnown RBP5.33□□□□□ -1.56
CCDC171-205ENST00000472806 DEFB135Q30KP9 77 aa5.33□□□□□ -1.56
CCDC171-205ENST00000472806 TEN1Q86WV5 123 aa5.33□□□□□ -1.56
CCDC171-205ENST00000472806 PDZD2O15018 2839 aa5.33□□□□□ -1.56
CCDC171-205ENST00000472806 CCDC168Q8NDH2 2452 aa5.32□□□□□ -1.56
CCDC171-205ENST00000472806 ZANQ9Y493 2812 aa5.32□□□□□ -1.56
CCDC171-205ENST00000472806 IGLV4-60A0A075B6I1 120 aa5.32□□□□□ -1.56
CCDC171-205ENST00000472806 TRAV13-2A0A0B4J235 113 aa5.32□□□□□ -1.56
CCDC171-205ENST00000472806 LINC00959A0A1B0GUT2 108 aa5.32□□□□□ -1.56
CCDC171-205ENST00000472806 SLC25A20O43772 301 aa5.32□□□□□ -1.56
CCDC171-205ENST00000472806 PCP4P48539 62 aa5.32□□□□□ -1.56
CCDC171-205ENST00000472806 FOXI1Q12951 378 aa5.32□□□□□ -1.56
CCDC171-205ENST00000472806 MRPL23Q16540 153 aaKnown RBP5.32□□□□□ -1.56
CCDC171-205ENST00000472806 LINC01600Q96MT4 127 aa5.32□□□□□ -1.56
CCDC171-205ENST00000472806 CSMD2Q7Z408 3487 aa5.32□□□□□ -1.56
CCDC171-205ENST00000472806 MXRA5Q9NR99 2828 aa5.31□□□□□ -1.56
CCDC171-205ENST00000472806 IGHV3OR16-9A0A0B4J2B5 98 aa5.31□□□□□ -1.56
CCDC171-205ENST00000472806 IGKV3OR2-268A0A0C4DH90 116 aa5.31□□□□□ -1.56
CCDC171-205ENST00000472806 TRBV10-2A0A0K0K1G8 114 aa5.31□□□□□ -1.56
CCDC171-205ENST00000472806 IBA57-AS1B1ANH7 110 aa5.31□□□□□ -1.56
CCDC171-205ENST00000472806 C9JAW5 83 aa5.31□□□□□ -1.56
CCDC171-205ENST00000472806 H3BT86 120 aa5.31□□□□□ -1.56
CCDC171-205ENST00000472806 TRIAP1O43715 76 aa5.31□□□□□ -1.56
CCDC171-205ENST00000472806 CXCL5P42830 114 aa5.31□□□□□ -1.56
CCDC171-205ENST00000472806 NPC2P61916 151 aa5.31□□□□□ -1.56
CCDC171-205ENST00000472806 LINC01620Q4KN68 170 aa5.31□□□□□ -1.56
CCDC171-205ENST00000472806 TOMM7Q9P0U1 55 aa5.31□□□□□ -1.56
CCDC171-205ENST00000472806 WNK1Q9H4A3 2382 aa5.31□□□□□ -1.56
CCDC171-205ENST00000472806 TLN2Q9Y4G6 2542 aa5.3□□□□□ -1.56
CCDC171-205ENST00000472806 ANK3Q12955 4377 aaKnown RBP5.3□□□□□ -1.56
CCDC171-205ENST00000472806 IGHV4-30-4P0DP06 118 aa5.3□□□□□ -1.56
CCDC171-205ENST00000472806 Q8IZM0 81 aa5.3□□□□□ -1.56
CCDC171-205ENST00000472806 ANKRD29Q8N6D5 301 aa5.3□□□□□ -1.56
CCDC171-205ENST00000472806 Q8NAQ8 132 aa5.3□□□□□ -1.56
CCDC171-205ENST00000472806 WWC2-AS2Q96NR7 200 aa5.3□□□□□ -1.56
CCDC171-205ENST00000472806 SIGMAR1Q99720 223 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms