RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 UACAQ9BZF9 1416 aa-0.29□□□□□ -2.46
CLK1-209ENST00000472679 LTN1O94822 1766 aa-0.29□□□□□ -2.46
CLK1-209ENST00000472679 KDM3BQ7LBC6 1761 aa-0.29□□□□□ -2.46
CLK1-209ENST00000472679 PLIN4Q96Q06 1357 aa-0.29□□□□□ -2.46
CLK1-209ENST00000472679 STATHP02808 62 aa-0.29□□□□□ -2.46
CLK1-209ENST00000472679 SRP9P49458 86 aaKnown RBP-0.29□□□□□ -2.46
CLK1-209ENST00000472679 POLR2HP52434 150 aaKnown RBP-0.29□□□□□ -2.46
CLK1-209ENST00000472679 VMO1Q7Z5L0 202 aa-0.29□□□□□ -2.46
CLK1-209ENST00000472679 MT1LQ93083 61 aa-0.29□□□□□ -2.46
CLK1-209ENST00000472679 FER1L6Q2WGJ9 1857 aa-0.29□□□□□ -2.46
CLK1-209ENST00000472679 TRPM2O94759 1503 aa-0.29□□□□□ -2.46
CLK1-209ENST00000472679 ATP7AQ04656 1500 aa-0.29□□□□□ -2.46
CLK1-209ENST00000472679 PHIPQ8WWQ0 1821 aa-0.29□□□□□ -2.46
CLK1-209ENST00000472679 ZNF518AQ6AHZ1 1483 aa-0.29□□□□□ -2.46
CLK1-209ENST00000472679 C4AP0C0L4 1744 aa-0.3□□□□□ -2.46
CLK1-209ENST00000472679 C4BP0C0L5 1744 aa-0.3□□□□□ -2.46
CLK1-209ENST00000472679 DDX60LQ5H9U9 1706 aaKnown RBP-0.3□□□□□ -2.46
CLK1-209ENST00000472679 MON2Q7Z3U7 1717 aa-0.3□□□□□ -2.46
CLK1-209ENST00000472679 NRAPQ86VF7 1730 aa-0.3□□□□□ -2.46
CLK1-209ENST00000472679 IBTKQ9P2D0 1353 aaPredicted RBP-0.3□□□□□ -2.46
CLK1-209ENST00000472679 SCN7AQ01118 1682 aa-0.3□□□□□ -2.46
CLK1-209ENST00000472679 PIK3C2BO00750 1634 aa-0.3□□□□□ -2.46
CLK1-209ENST00000472679 ABCA5Q8WWZ7 1642 aa-0.3□□□□□ -2.46
CLK1-209ENST00000472679 C20orf202A1L168 122 aa-0.3□□□□□ -2.46
CLK1-209ENST00000472679 TNFSF15O95150 251 aa-0.3□□□□□ -2.46
CLK1-209ENST00000472679 RPL7P18124 248 aaKnown RBP-0.3□□□□□ -2.46
CLK1-209ENST00000472679 ETV6P41212 452 aa-0.3□□□□□ -2.46
CLK1-209ENST00000472679 DEFB109BQ30KR1 87 aa-0.3□□□□□ -2.46
CLK1-209ENST00000472679 ABCC1P33527 1531 aa-0.3□□□□□ -2.46
CLK1-209ENST00000472679 DLEC1Q9Y238 1755 aa-0.3□□□□□ -2.46
CLK1-209ENST00000472679 BCORQ6W2J9 1755 aa-0.31□□□□□ -2.46
CLK1-209ENST00000472679 GOLGA4Q13439 2230 aaKnown RBP-0.31□□□□□ -2.46
CLK1-209ENST00000472679 IFNA21P01568 189 aa-0.31□□□□□ -2.46
CLK1-209ENST00000472679 IFNA17P01571 189 aa-0.31□□□□□ -2.46
CLK1-209ENST00000472679 TFF3Q07654 80 aa-0.31□□□□□ -2.46
CLK1-209ENST00000472679 IDO2Q6ZQW0 420 aa-0.31□□□□□ -2.46
CLK1-209ENST00000472679 BRK1Q8WUW1 75 aa-0.31□□□□□ -2.46
CLK1-209ENST00000472679 TTTY10Q9BZA0 68 aa-0.31□□□□□ -2.46
CLK1-209ENST00000472679 ATG5Q9H1Y0 275 aa-0.31□□□□□ -2.46
CLK1-209ENST00000472679 CLTCQ00610 1675 aaKnown RBP-0.31□□□□□ -2.46
CLK1-209ENST00000472679 CCDC180Q9P1Z9 1646 aa-0.31□□□□□ -2.46
CLK1-209ENST00000472679 DUOX1Q9NRD9 1551 aa-0.32□□□□□ -2.46
CLK1-209ENST00000472679 LMTK2Q8IWU2 1503 aa-0.32□□□□□ -2.46
CLK1-209ENST00000472679 PRDM2Q13029 1718 aa-0.32□□□□□ -2.46
CLK1-209ENST00000472679 MROH2AA6NES4 1674 aa-0.32□□□□□ -2.46
CLK1-209ENST00000472679 YPEL1O60688 119 aa-0.32□□□□□ -2.46
CLK1-209ENST00000472679 HBDP02042 147 aa-0.32□□□□□ -2.46
CLK1-209ENST00000472679 MPC1LP0DKB6 136 aa-0.32□□□□□ -2.46
CLK1-209ENST00000472679 OR5A2Q8NGI9 324 aa-0.32□□□□□ -2.46
CLK1-209ENST00000472679 OTOSQ8NHW6 89 aa-0.32□□□□□ -2.46
CLK1-209ENST00000472679 MRPL40Q9NQ50 206 aaKnown RBP-0.32□□□□□ -2.46
CLK1-209ENST00000472679 CFAP74Q9C0B2 1584 aa-0.32□□□□□ -2.46
CLK1-209ENST00000472679 MYH1P12882 1939 aa-0.32□□□□□ -2.46
CLK1-209ENST00000472679 DDX60Q8IY21 1712 aaKnown RBP-0.33□□□□□ -2.46
CLK1-209ENST00000472679 ARFGEF1Q9Y6D6 1849 aa-0.33□□□□□ -2.46
CLK1-209ENST00000472679 FYCO1Q9BQS8 1478 aa-0.33□□□□□ -2.46
CLK1-209ENST00000472679 CD163L1Q9NR16 1453 aa-0.33□□□□□ -2.46
CLK1-209ENST00000472679 FXYD6-FXYD2A0A087WZ82 144 aa-0.33□□□□□ -2.46
CLK1-209ENST00000472679 E7EQ34 232 aa-0.33□□□□□ -2.46
CLK1-209ENST00000472679 PFDN1O60925 122 aa-0.33□□□□□ -2.46
CLK1-209ENST00000472679 SPINK1P00995 79 aa-0.33□□□□□ -2.46
CLK1-209ENST00000472679 KLK9Q2XQG4 91 aa-0.33□□□□□ -2.46
CLK1-209ENST00000472679 KRTAP19-5Q3LI72 72 aa-0.33□□□□□ -2.46
CLK1-209ENST00000472679 Q5BKY6 102 aa-0.33□□□□□ -2.46
CLK1-209ENST00000472679 UBE2DNLQ8IWF7 75 aa-0.33□□□□□ -2.46
CLK1-209ENST00000472679 NAT14Q8WUY8 206 aa-0.33□□□□□ -2.46
CLK1-209ENST00000472679 ATPIF1Q9UII2 106 aa-0.33□□□□□ -2.46
CLK1-209ENST00000472679 CEP152O94986 1710 aa-0.33□□□□□ -2.46
CLK1-209ENST00000472679 RICTORQ6R327 1708 aa-0.33□□□□□ -2.46
CLK1-209ENST00000472679 MYO5CQ9NQX4 1742 aa-0.33□□□□□ -2.46
CLK1-209ENST00000472679 UNC13AQ9UPW8 1703 aa-0.33□□□□□ -2.46
CLK1-209ENST00000472679 SYCP2Q9BX26 1530 aa-0.33□□□□□ -2.46
CLK1-209ENST00000472679 FAM208AQ9UK61 1670 aaKnown RBP-0.33□□□□□ -2.46
CLK1-209ENST00000472679 BTAF1O14981 1849 aa-0.34□□□□□ -2.46
CLK1-209ENST00000472679 SBF2Q86WG5 1849 aa-0.34□□□□□ -2.46
CLK1-209ENST00000472679 A0A087WTM6 91 aa-0.34□□□□□ -2.46
CLK1-209ENST00000472679 DEFB4AO15263 64 aa-0.34□□□□□ -2.46
CLK1-209ENST00000472679 FAM107AO95990 144 aa-0.34□□□□□ -2.46
CLK1-209ENST00000472679 CCKP06307 115 aa-0.34□□□□□ -2.46
CLK1-209ENST00000472679 CKS2P33552 79 aa-0.34□□□□□ -2.46
CLK1-209ENST00000472679 CDC42BPAQ5VT25 1732 aa-0.34□□□□□ -2.46
CLK1-209ENST00000472679 NDUFA11Q86Y39 141 aa-0.34□□□□□ -2.46
CLK1-209ENST00000472679 KIAA1551Q9HCM1 1747 aa-0.34□□□□□ -2.46
CLK1-209ENST00000472679 IFT172Q9UG01 1749 aa-0.34□□□□□ -2.46
CLK1-209ENST00000472679 ABCA10Q8WWZ4 1543 aa-0.34□□□□□ -2.46
CLK1-209ENST00000472679 CCNB3Q8WWL7 1395 aa-0.34□□□□□ -2.46
CLK1-209ENST00000472679 ANKRD36CQ5JPF3 1778 aa-0.34□□□□□ -2.46
CLK1-209ENST00000472679 PRXQ9BXM0 1461 aa-0.35□□□□□ -2.46
CLK1-209ENST00000472679 DOCK1Q14185 1865 aa-0.35□□□□□ -2.46
CLK1-209ENST00000472679 NWD2Q9ULI1 1742 aa-0.35□□□□□ -2.47
CLK1-209ENST00000472679 CPSF1Q10570 1443 aaKnown RBP-0.35□□□□□ -2.47
CLK1-209ENST00000472679 EDC4Q6P2E9 1401 aaKnown RBP-0.35□□□□□ -2.47
CLK1-209ENST00000472679 IGHV1-24A0A0C4DH33 117 aa-0.35□□□□□ -2.47
CLK1-209ENST00000472679 A0A1B0GUL6 1792 aa-0.35□□□□□ -2.47
CLK1-209ENST00000472679 ABCA9Q8IUA7 1624 aa-0.35□□□□□ -2.47
CLK1-209ENST00000472679 TRBV20-1A0A075B6N2 111 aa-0.36□□□□□ -2.47
CLK1-209ENST00000472679 K7EP34 96 aa-0.36□□□□□ -2.47
CLK1-209ENST00000472679 TNFP01375 233 aa-0.36□□□□□ -2.47
CLK1-209ENST00000472679 PIRTP0C851 137 aa-0.36□□□□□ -2.47
CLK1-209ENST00000472679 RPL22P35268 128 aaKnown RBP-0.36□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms