RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 C6orf48Q9UBA6 75 aa5.77□□□□□ -1.49
CDHR3-209ENST00000472116 NDUFA12Q9UI09 145 aa5.77□□□□□ -1.49
CDHR3-209ENST00000472116 TMA7Q9Y2S6 64 aaKnown RBP5.77□□□□□ -1.49
CDHR3-209ENST00000472116 BORCS7-ASMTA0A0B4J1R7 106 aa5.76□□□□□ -1.49
CDHR3-209ENST00000472116 TRAV13-1A0A0B4J241 112 aa5.76□□□□□ -1.49
CDHR3-209ENST00000472116 CTXND1A0A1B0GTU2 59 aa5.76□□□□□ -1.49
CDHR3-209ENST00000472116 SDHAF1A6NFY7 115 aa5.76□□□□□ -1.49
CDHR3-209ENST00000472116 F2Z2F3 143 aa5.76□□□□□ -1.49
CDHR3-209ENST00000472116 KRTAP19-2Q3LHN2 52 aa5.76□□□□□ -1.49
CDHR3-209ENST00000472116 LINC00242Q5T6M2 205 aa5.76□□□□□ -1.49
CDHR3-209ENST00000472116 TMUB2Q71RG4 321 aa5.76□□□□□ -1.49
CDHR3-209ENST00000472116 MRPL52Q86TS9 123 aaKnown RBP5.76□□□□□ -1.49
CDHR3-209ENST00000472116 SLC51BQ86UW2 128 aa5.76□□□□□ -1.49
CDHR3-209ENST00000472116 CYTL1Q9NRR1 136 aa5.76□□□□□ -1.49
CDHR3-209ENST00000472116 XKRY2A2RUG3 117 aa5.75□□□□□ -1.49
CDHR3-209ENST00000472116 NDUFC2-KCTD14E9PQ53 114 aa5.75□□□□□ -1.49
CDHR3-209ENST00000472116 IGLC6P0CF74 106 aa5.75□□□□□ -1.49
CDHR3-209ENST00000472116 UBE2AP49459 152 aa5.75□□□□□ -1.49
CDHR3-209ENST00000472116 C10orf25Q5T742 122 aa5.75□□□□□ -1.49
CDHR3-209ENST00000472116 TEX261Q6UWH6 196 aa5.75□□□□□ -1.49
CDHR3-209ENST00000472116 UNQ6190/PRO20217Q6UXQ8 127 aa5.75□□□□□ -1.49
CDHR3-209ENST00000472116 GATD1Q8NB37 220 aa5.75□□□□□ -1.49
CDHR3-209ENST00000472116 RPL39LQ96EH5 51 aaKnown RBP5.75□□□□□ -1.49
CDHR3-209ENST00000472116 FHITP49789 147 aa5.74□□□□□ -1.49
CDHR3-209ENST00000472116 PACRGQ96M98 296 aaPredicted RBP5.74□□□□□ -1.49
CDHR3-209ENST00000472116 FAM210AQ96ND0 272 aa5.74□□□□□ -1.49
CDHR3-209ENST00000472116 KIR2DL4Q99706 377 aa5.74□□□□□ -1.49
CDHR3-209ENST00000472116 C22orf24Q9Y442 160 aa5.74□□□□□ -1.49
CDHR3-209ENST00000472116 C7orf77A4D0Y5 90 aa5.73□□□□□ -1.49
CDHR3-209ENST00000472116 LINC00310P59036 64 aa5.73□□□□□ -1.49
CDHR3-209ENST00000472116 TWIST1Q15672 202 aa5.73□□□□□ -1.49
CDHR3-209ENST00000472116 C9orf129Q5T035 196 aaKnown RBP5.73□□□□□ -1.49
CDHR3-209ENST00000472116 COX6B2Q6YFQ2 88 aa5.73□□□□□ -1.49
CDHR3-209ENST00000472116 SMIM15Q7Z3B0 74 aa5.73□□□□□ -1.49
CDHR3-209ENST00000472116 TRBV30A0A0K0K1B3 111 aa5.72□□□□□ -1.49
CDHR3-209ENST00000472116 TNFRSF6BO95407 300 aa5.72□□□□□ -1.49
CDHR3-209ENST00000472116 TMEM242Q9NWH2 141 aa5.72□□□□□ -1.49
CDHR3-209ENST00000472116 SYNE2Q8WXH0 6885 aaKnown RBP5.72□□□□□ -1.49
CDHR3-209ENST00000472116 IFNA1P01562 189 aa5.71□□□□□ -1.5
CDHR3-209ENST00000472116 RNASE13Q5GAN3 156 aaKnown RBP5.71□□□□□ -1.5
CDHR3-209ENST00000472116 LYZL1Q6UWQ5 148 aa5.71□□□□□ -1.5
CDHR3-209ENST00000472116 MRPL55Q7Z7F7 128 aaKnown RBP5.71□□□□□ -1.5
CDHR3-209ENST00000472116 SSPOA2VEC9 5147 aa5.7□□□□□ -1.5
CDHR3-209ENST00000472116 IGLV8-61A0A075B6I0 122 aa5.7□□□□□ -1.5
CDHR3-209ENST00000472116 MAP1LC3B2A6NCE7 125 aa5.7□□□□□ -1.5
CDHR3-209ENST00000472116 UMAD1C9J7I0 102 aa5.7□□□□□ -1.5
CDHR3-209ENST00000472116 ZNF726P1Q15940 193 aa5.7□□□□□ -1.5
CDHR3-209ENST00000472116 RPL7L1Q6DKI1 246 aaKnown RBP5.7□□□□□ -1.5
CDHR3-209ENST00000472116 MAP1LC3BQ9GZQ8 125 aa5.7□□□□□ -1.5
CDHR3-209ENST00000472116 ST20Q9HBF5 79 aa5.7□□□□□ -1.5
CDHR3-209ENST00000472116 AKR1C8PQ5T2L2 129 aa5.69□□□□□ -1.5
CDHR3-209ENST00000472116 FAM19A2Q8N3H0 131 aa5.69□□□□□ -1.5
CDHR3-209ENST00000472116 TP73-AS1Q9UF72 201 aa5.69□□□□□ -1.5
CDHR3-209ENST00000472116 CSDC2Q9Y534 153 aaKnown RBP5.69□□□□□ -1.5
CDHR3-209ENST00000472116 RAB19A4D1S5 217 aa5.68□□□□□ -1.5
CDHR3-209ENST00000472116 FCER1GP30273 86 aa5.68□□□□□ -1.5
CDHR3-209ENST00000472116 RAB14P61106 215 aa5.68□□□□□ -1.5
CDHR3-209ENST00000472116 MACF1Q9UPN3 7388 aaKnown RBP5.68□□□□□ -1.5
CDHR3-209ENST00000472116 RPL37AP8A6NKH3 93 aa5.67□□□□□ -1.5
CDHR3-209ENST00000472116 ZNF727A8MUV8 499 aa5.67□□□□□ -1.5
CDHR3-209ENST00000472116 PAGE4O60829 102 aa5.67□□□□□ -1.5
CDHR3-209ENST00000472116 CFC1P0CG37 223 aa5.67□□□□□ -1.5
CDHR3-209ENST00000472116 FOXA3P55318 350 aaPredicted RBP5.67□□□□□ -1.5
CDHR3-209ENST00000472116 C3orf22Q8N5N4 141 aa5.67□□□□□ -1.5
CDHR3-209ENST00000472116 LINC00469Q8N7U9 141 aa5.67□□□□□ -1.5
CDHR3-209ENST00000472116 TGIF2-C20orf24A0A0A6YYL0 155 aa5.66□□□□□ -1.5
CDHR3-209ENST00000472116 TRBV6-5A0A0K0K1A5 114 aa5.66□□□□□ -1.5
CDHR3-209ENST00000472116 TEX46H3BTG2 121 aa5.66□□□□□ -1.5
CDHR3-209ENST00000472116 BLOC1S1P78537 153 aa5.66□□□□□ -1.5
CDHR3-209ENST00000472116 PCOTHQ58A44 107 aa5.66□□□□□ -1.5
CDHR3-209ENST00000472116 ALKAL2Q6UX46 152 aa5.66□□□□□ -1.5
CDHR3-209ENST00000472116 TMEM18Q96B42 140 aa5.66□□□□□ -1.5
CDHR3-209ENST00000472116 XAGE1AQ9HD64 81 aa5.66□□□□□ -1.5
CDHR3-209ENST00000472116 FCGBPQ9Y6R7 5405 aaPredicted RBP5.65□□□□□ -1.5
CDHR3-209ENST00000472116 IGHV3OR16-9A0A0B4J2B5 98 aa5.65□□□□□ -1.5
CDHR3-209ENST00000472116 SPINK1P00995 79 aa5.65□□□□□ -1.5
CDHR3-209ENST00000472116 IFITM2Q01629 132 aa5.65□□□□□ -1.5
CDHR3-209ENST00000472116 C2orf82Q6UX34 121 aa5.65□□□□□ -1.5
CDHR3-209ENST00000472116 Q6ZUT4 128 aa5.65□□□□□ -1.5
CDHR3-209ENST00000472116 RNASE7Q9H1E1 156 aaKnown RBP5.65□□□□□ -1.5
CDHR3-209ENST00000472116 RPL35P42766 123 aaKnown RBP5.64□□□□□ -1.51
CDHR3-209ENST00000472116 CLLU1Q5K131 121 aa5.64□□□□□ -1.51
CDHR3-209ENST00000472116 KRTAP13-1Q8IUC0 172 aa5.64□□□□□ -1.51
CDHR3-209ENST00000472116 LINC00167Q96N53 147 aa5.64□□□□□ -1.51
CDHR3-209ENST00000472116 USH2AO75445 5202 aa5.64□□□□□ -1.51
CDHR3-209ENST00000472116 TRBV27A0A0K0K1C4 114 aa5.63□□□□□ -1.51
CDHR3-209ENST00000472116 NDUFA5Q16718 116 aa5.63□□□□□ -1.51
CDHR3-209ENST00000472116 FAM213BQ8TBF2 198 aa5.63□□□□□ -1.51
CDHR3-209ENST00000472116 CNFNQ9BYD5 112 aa5.63□□□□□ -1.51
CDHR3-209ENST00000472116 BIN3Q9NQY0 253 aa5.63□□□□□ -1.51
CDHR3-209ENST00000472116 GAGE10A6NGK3 116 aa5.62□□□□□ -1.51
CDHR3-209ENST00000472116 PRSS2P07478 247 aa5.62□□□□□ -1.51
CDHR3-209ENST00000472116 TAGLN2P37802 199 aaKnown RBP5.62□□□□□ -1.51
CDHR3-209ENST00000472116 CKS1BP61024 79 aa5.62□□□□□ -1.51
CDHR3-209ENST00000472116 PNRC1Q12796 327 aaPredicted RBP5.62□□□□□ -1.51
CDHR3-209ENST00000472116 KIAA0087Q14695 138 aa5.62□□□□□ -1.51
CDHR3-209ENST00000472116 CENPWQ5EE01 88 aa5.62□□□□□ -1.51
CDHR3-209ENST00000472116 Q8NBF4 154 aa5.62□□□□□ -1.51
CDHR3-209ENST00000472116 MBD3L1Q8WWY6 194 aa5.62□□□□□ -1.51
CDHR3-209ENST00000472116 KRTAP9-8Q9BYQ0 159 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms