RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 LINC00959A0A1B0GUT2 108 aa12.44□□□□□ -0.42
SMC4-211ENST00000469858 ANGP03950 147 aaKnown RBP12.44□□□□□ -0.42
SMC4-211ENST00000469858 COL5A1-AS1Q5SY13 56 aa12.44□□□□□ -0.42
SMC4-211ENST00000469858 B9D2Q9BPU9 175 aa12.44□□□□□ -0.42
SMC4-211ENST00000469858 SMIM1B2RUZ4 78 aa12.43□□□□□ -0.42
SMC4-211ENST00000469858 LINC00269Q8N2A0 174 aa12.43□□□□□ -0.42
SMC4-211ENST00000469858 GCSHP23434 173 aa12.41□□□□□ -0.42
SMC4-211ENST00000469858 ORAOV1Q8WV07 137 aa12.41□□□□□ -0.42
SMC4-211ENST00000469858 HIST1H4GQ99525 98 aa12.41□□□□□ -0.42
SMC4-211ENST00000469858 IGLV5-39A0A0G2JS06 123 aa12.4□□□□□ -0.42
SMC4-211ENST00000469858 SS18Q15532 418 aa12.4□□□□□ -0.42
SMC4-211ENST00000469858 NDUFA12Q9UI09 145 aa12.4□□□□□ -0.42
SMC4-211ENST00000469858 A0A1B0GV90 55 aa12.39□□□□□ -0.43
SMC4-211ENST00000469858 REG3AQ06141 175 aa12.39□□□□□ -0.43
SMC4-211ENST00000469858 ESRGQ1W209 222 aa12.39□□□□□ -0.43
SMC4-211ENST00000469858 C10orf126Q8N4M7 172 aa12.39□□□□□ -0.43
SMC4-211ENST00000469858 IGHV3OR16-9A0A0B4J2B5 98 aa12.39□□□□□ -0.43
SMC4-211ENST00000469858 CCL25O15444 150 aa12.39□□□□□ -0.43
SMC4-211ENST00000469858 XCL1P47992 114 aa12.39□□□□□ -0.43
SMC4-211ENST00000469858 ZFAND6Q6FIF0 208 aa12.39□□□□□ -0.43
SMC4-211ENST00000469858 WFDC10BQ8IUB3 73 aa12.39□□□□□ -0.43
SMC4-211ENST00000469858 TAL2Q16559 108 aa12.38□□□□□ -0.43
SMC4-211ENST00000469858 CEND1Q8N111 149 aa12.38□□□□□ -0.43
SMC4-211ENST00000469858 IGHV3-30P01768 117 aa12.38□□□□□ -0.43
SMC4-211ENST00000469858 IGHV3-33P01772 117 aa12.38□□□□□ -0.43
SMC4-211ENST00000469858 IGHV3-30-5P0DP03 117 aa12.38□□□□□ -0.43
SMC4-211ENST00000469858 FXYD2P54710 66 aa12.38□□□□□ -0.43
SMC4-211ENST00000469858 C5orf38Q86SI9 138 aa12.38□□□□□ -0.43
SMC4-211ENST00000469858 DNHD1Q96M86 4753 aa12.37□□□□□ -0.43
SMC4-211ENST00000469858 DNAH9Q9NYC9 4486 aa12.37□□□□□ -0.43
SMC4-211ENST00000469858 K7EP13 123 aa12.37□□□□□ -0.43
SMC4-211ENST00000469858 SRSF9Q13242 221 aaKnown RBP eCLIP12.37□□□□□ -0.43
SMC4-211ENST00000469858 A0A0J9YXY3 114 aa12.36□□□□□ -0.43
SMC4-211ENST00000469858 C15orf53Q8NAA6 179 aa12.36□□□□□ -0.43
SMC4-211ENST00000469858 KLK12Q9UKR0 248 aa12.36□□□□□ -0.43
SMC4-211ENST00000469858 COL7A1Q02388 2944 aa12.36□□□□□ -0.43
SMC4-211ENST00000469858 IGLV10-54A0A075B6I4 117 aa12.36□□□□□ -0.43
SMC4-211ENST00000469858 TM2D2Q9BX73 214 aa12.36□□□□□ -0.43
SMC4-211ENST00000469858 A0A087WZ39 114 aa12.35□□□□□ -0.43
SMC4-211ENST00000469858 PTTG1IPP53801 180 aa12.35□□□□□ -0.43
SMC4-211ENST00000469858 A6NDN8 102 aa12.34□□□□□ -0.43
SMC4-211ENST00000469858 NDUFA1O15239 70 aa12.34□□□□□ -0.43
SMC4-211ENST00000469858 CHCHD10Q8WYQ3 142 aaPredicted RBP12.34□□□□□ -0.43
SMC4-211ENST00000469858 SPANXB1Q9NS25 103 aaPredicted RBP12.34□□□□□ -0.43
SMC4-211ENST00000469858 IGLL5B9A064 214 aa12.33□□□□□ -0.44
SMC4-211ENST00000469858 KRTAP21-3Q3LHN1 58 aa12.33□□□□□ -0.44
SMC4-211ENST00000469858 Q6ZVH6 145 aa12.33□□□□□ -0.44
SMC4-211ENST00000469858 Q9H8V8 135 aa12.33□□□□□ -0.44
SMC4-211ENST00000469858 TOMM7Q9P0U1 55 aa12.33□□□□□ -0.44
SMC4-211ENST00000469858 TMEM238C9JI98 176 aa12.32□□□□□ -0.44
SMC4-211ENST00000469858 PRR34Q9NV39 138 aa12.32□□□□□ -0.44
SMC4-211ENST00000469858 CD164L2Q6UWJ8 174 aa12.31□□□□□ -0.44
SMC4-211ENST00000469858 COX7B2Q8TF08 81 aa12.31□□□□□ -0.44
SMC4-211ENST00000469858 CRPP02741 224 aa12.3□□□□□ -0.44
SMC4-211ENST00000469858 ENHOQ6UWT2 76 aa12.3□□□□□ -0.44
SMC4-211ENST00000469858 NHP2Q9NX24 153 aaKnown RBP12.3□□□□□ -0.44
SMC4-211ENST00000469858 TAX1BP3O14907 124 aa12.3□□□□□ -0.44
SMC4-211ENST00000469858 UBE2WQ96B02 151 aa12.3□□□□□ -0.44
SMC4-211ENST00000469858 ZNF625Q96I27 306 aaPredicted RBP12.3□□□□□ -0.44
SMC4-211ENST00000469858 NHLRC4P0CG21 123 aaPredicted RBP12.29□□□□□ -0.44
SMC4-211ENST00000469858 LITAFQ99732 161 aa12.29□□□□□ -0.44
SMC4-211ENST00000469858 STAB2Q8WWQ8 2551 aa12.28□□□□□ -0.44
SMC4-211ENST00000469858 K7ERJ3 54 aa12.28□□□□□ -0.44
SMC4-211ENST00000469858 COX7A2LO14548 114 aa12.28□□□□□ -0.44
SMC4-211ENST00000469858 RAB37Q96AX2 223 aa12.27□□□□□ -0.44
SMC4-211ENST00000469858 FOXI1Q12951 378 aa12.27□□□□□ -0.45
SMC4-211ENST00000469858 LINC01556Q5JQF7 62 aa12.27□□□□□ -0.45
SMC4-211ENST00000469858 ADAMTSL4-AS1Q5T5F5 129 aa12.27□□□□□ -0.45
SMC4-211ENST00000469858 LINC00588Q9Y4M8 146 aa12.27□□□□□ -0.45
SMC4-211ENST00000469858 COX11Q9Y6N1 276 aa12.27□□□□□ -0.45
SMC4-211ENST00000469858 GAGE12HA6NDE8 117 aa12.26□□□□□ -0.45
SMC4-211ENST00000469858 SMIM13P0DJ93 91 aa12.26□□□□□ -0.45
SMC4-211ENST00000469858 MALP21145 153 aa12.26□□□□□ -0.45
SMC4-211ENST00000469858 LINC01561Q8N1V8 128 aa12.26□□□□□ -0.45
SMC4-211ENST00000469858 TMEM238LA0A1B0GVL6 79 aa12.25□□□□□ -0.45
SMC4-211ENST00000469858 A6NJY4 79 aa12.25□□□□□ -0.45
SMC4-211ENST00000469858 CCL18P55774 89 aa12.25□□□□□ -0.45
SMC4-211ENST00000469858 HERV-K104P63124 156 aa12.25□□□□□ -0.45
SMC4-211ENST00000469858 TIMM17BO60830 172 aa12.25□□□□□ -0.45
SMC4-211ENST00000469858 MEIG1Q5JSS6 88 aa12.25□□□□□ -0.45
SMC4-211ENST00000469858 PRSS2P07478 247 aa12.24□□□□□ -0.45
SMC4-211ENST00000469858 CIRBPQ14011 172 aaKnown RBP12.24□□□□□ -0.45
SMC4-211ENST00000469858 MUSTN1Q8IVN3 82 aa12.24□□□□□ -0.45
SMC4-211ENST00000469858 SPANXDQ9BXN6 97 aa12.24□□□□□ -0.45
SMC4-211ENST00000469858 SPANXCQ9NY87 97 aa12.24□□□□□ -0.45
SMC4-211ENST00000469858 TRAV8-4A0A0B4J246 113 aa12.23□□□□□ -0.45
SMC4-211ENST00000469858 A0A0U1RRA0 63 aa12.23□□□□□ -0.45
SMC4-211ENST00000469858 MIAQ16674 131 aa12.23□□□□□ -0.45
SMC4-211ENST00000469858 DAND5Q8N907 189 aa12.23□□□□□ -0.45
SMC4-211ENST00000469858 DNAH10OSP0CZ25 163 aa12.23□□□□□ -0.45
SMC4-211ENST00000469858 NPC2P61916 151 aa12.23□□□□□ -0.45
SMC4-211ENST00000469858 C6orf226Q5I0X4 101 aa12.23□□□□□ -0.45
SMC4-211ENST00000469858 Q8IZM0 81 aa12.22□□□□□ -0.45
SMC4-211ENST00000469858 PRKDCP78527 4128 aaKnown RBP12.22□□□□□ -0.45
SMC4-211ENST00000469858 NAA38Q9BRA0 125 aaKnown RBP12.21□□□□□ -0.45
SMC4-211ENST00000469858 RPL24P83731 157 aaKnown RBP12.21□□□□□ -0.46
SMC4-211ENST00000469858 A0A1B0GWB2 263 aa12.2□□□□□ -0.46
SMC4-211ENST00000469858 A4D1N5 150 aa12.2□□□□□ -0.46
SMC4-211ENST00000469858 APOMO95445 188 aa12.2□□□□□ -0.46
SMC4-211ENST00000469858 C9orf118A6NHY6 69 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms