RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 GCSHP23434 173 aa12.11□□□□□ -0.47
MRPL28-208ENST00000469744 UBE2V1Q13404 147 aa12.11□□□□□ -0.47
MRPL28-208ENST00000469744 C1orf134Q5TEV5 83 aa12.11□□□□□ -0.47
MRPL28-208ENST00000469744 PKHD1P08F94 4074 aa12.11□□□□□ -0.47
MRPL28-208ENST00000469744 IGHV3-38A0A0C4DH36 116 aa12.1□□□□□ -0.47
MRPL28-208ENST00000469744 A0A0J9YXV3 536 aa12.1□□□□□ -0.47
MRPL28-208ENST00000469744 NBDYA0A0U1RRE5 68 aa12.1□□□□□ -0.47
MRPL28-208ENST00000469744 TINCRA0A1B0GVN0 87 aa12.1□□□□□ -0.47
MRPL28-208ENST00000469744 C9orf118A6NHY6 69 aa12.1□□□□□ -0.47
MRPL28-208ENST00000469744 PLEKHB2Q96CS7 222 aa12.1□□□□□ -0.47
MRPL28-208ENST00000469744 VSIG2Q96IQ7 327 aa12.1□□□□□ -0.47
MRPL28-208ENST00000469744 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.09□□□□□ -0.47
MRPL28-208ENST00000469744 IGKV2-29A2NJV5 120 aaPredicted RBP12.09□□□□□ -0.47
MRPL28-208ENST00000469744 SMIM13P0DJ93 91 aa12.09□□□□□ -0.47
MRPL28-208ENST00000469744 Q6ZVH6 145 aa12.09□□□□□ -0.47
MRPL28-208ENST00000469744 H7C423 109 aa12.08□□□□□ -0.47
MRPL28-208ENST00000469744 J3QQQ9 107 aa12.08□□□□□ -0.47
MRPL28-208ENST00000469744 FXYD2P54710 66 aa12.08□□□□□ -0.47
MRPL28-208ENST00000469744 ESRGQ1W209 222 aa12.08□□□□□ -0.47
MRPL28-208ENST00000469744 HIST1H4GQ99525 98 aa12.08□□□□□ -0.47
MRPL28-208ENST00000469744 PKD1P98161 4303 aa12.08□□□□□ -0.48
MRPL28-208ENST00000469744 A0A096LPF7 62 aa12.08□□□□□ -0.48
MRPL28-208ENST00000469744 TRGV4A0A0C4DH28 118 aa12.08□□□□□ -0.48
MRPL28-208ENST00000469744 FHL2Q14192 279 aa12.08□□□□□ -0.48
MRPL28-208ENST00000469744 GAGE12JA6NER3 117 aa12.07□□□□□ -0.48
MRPL28-208ENST00000469744 H3BNG1 76 aa12.07□□□□□ -0.48
MRPL28-208ENST00000469744 LGALS3P17931 250 aaKnown RBP12.07□□□□□ -0.48
MRPL28-208ENST00000469744 PTTG1IPP53801 180 aa12.07□□□□□ -0.48
MRPL28-208ENST00000469744 TIRAPP58753 221 aa12.07□□□□□ -0.48
MRPL28-208ENST00000469744 GAGE4Q13068 117 aa12.07□□□□□ -0.48
MRPL28-208ENST00000469744 GAGE5Q13069 117 aa12.07□□□□□ -0.48
MRPL28-208ENST00000469744 VAMP3Q15836 100 aa12.07□□□□□ -0.48
MRPL28-208ENST00000469744 GAGE13Q4V321 117 aa12.07□□□□□ -0.48
MRPL28-208ENST00000469744 Q6ZUT4 128 aa12.07□□□□□ -0.48
MRPL28-208ENST00000469744 FAM19A3Q7Z5A8 133 aa12.07□□□□□ -0.48
MRPL28-208ENST00000469744 SPANXB1Q9NS25 103 aaPredicted RBP12.07□□□□□ -0.48
MRPL28-208ENST00000469744 UBE2D1P51668 147 aa12.06□□□□□ -0.48
MRPL28-208ENST00000469744 DGAT2L7PQ6IED9 249 aa12.06□□□□□ -0.48
MRPL28-208ENST00000469744 SCGB1D4Q6XE38 83 aa12.06□□□□□ -0.48
MRPL28-208ENST00000469744 NTM-AS1Q6ZSK4 140 aa12.06□□□□□ -0.48
MRPL28-208ENST00000469744 OR5A1Q8NGJ0 315 aa12.06□□□□□ -0.48
MRPL28-208ENST00000469744 Q9H8V8 135 aa12.06□□□□□ -0.48
MRPL28-208ENST00000469744 KIAA1109Q2LD37 5005 aa12.06□□□□□ -0.48
MRPL28-208ENST00000469744 PAX4O43316 350 aa12.05□□□□□ -0.48
MRPL28-208ENST00000469744 LINC00694P0DN24 101 aa12.05□□□□□ -0.48
MRPL28-208ENST00000469744 TSPEAR-AS2P59090 65 aa12.05□□□□□ -0.48
MRPL28-208ENST00000469744 KRTAP1-5Q9BYS1 174 aa12.05□□□□□ -0.48
MRPL28-208ENST00000469744 IGLV5-45A0A087WSX0 123 aa12.04□□□□□ -0.48
MRPL28-208ENST00000469744 A0A1B0GWB2 263 aa12.04□□□□□ -0.48
MRPL28-208ENST00000469744 C6orf223Q8N319 242 aa12.04□□□□□ -0.48
MRPL28-208ENST00000469744 TMEM243Q9BU79 118 aa12.04□□□□□ -0.48
MRPL28-208ENST00000469744 TNP2Q05952 138 aa12.03□□□□□ -0.48
MRPL28-208ENST00000469744 HERC2O95714 4834 aa12.03□□□□□ -0.48
MRPL28-208ENST00000469744 IGHV1-58A0A0C4DH39 117 aa12.02□□□□□ -0.48
MRPL28-208ENST00000469744 TMEM238LA0A1B0GVL6 79 aa12.02□□□□□ -0.48
MRPL28-208ENST00000469744 A6NJY4 79 aa12.02□□□□□ -0.48
MRPL28-208ENST00000469744 CCL25O15444 150 aa12.02□□□□□ -0.48
MRPL28-208ENST00000469744 AMMECR1LQ6DCA0 310 aa12.02□□□□□ -0.48
MRPL28-208ENST00000469744 UPK3BQ9BT76 320 aa12.02□□□□□ -0.48
MRPL28-208ENST00000469744 PRO0255Q9UI72 69 aa12.02□□□□□ -0.48
MRPL28-208ENST00000469744 ICOSQ9Y6W8 199 aa12.02□□□□□ -0.48
MRPL28-208ENST00000469744 GEMIN7Q9H840 131 aaKnown RBP12.02□□□□□ -0.49
MRPL28-208ENST00000469744 NHP2Q9NX24 153 aaKnown RBP12.01□□□□□ -0.49
MRPL28-208ENST00000469744 K7EP13 123 aa12□□□□□ -0.49
MRPL28-208ENST00000469744 IGHV3-30-3P0DP02 117 aa12□□□□□ -0.49
MRPL28-208ENST00000469744 HERVK_113P63121 156 aa12□□□□□ -0.49
MRPL28-208ENST00000469744 SRSF9Q13242 221 aaKnown RBP eCLIP12□□□□□ -0.49
MRPL28-208ENST00000469744 GTF2H5Q6ZYL4 71 aa12□□□□□ -0.49
MRPL28-208ENST00000469744 CDC42SE2Q9NRR3 84 aa12□□□□□ -0.49
MRPL28-208ENST00000469744 A0A1W2PPM0 123 aa11.99□□□□□ -0.49
MRPL28-208ENST00000469744 H3BUT2 72 aa11.99□□□□□ -0.49
MRPL28-208ENST00000469744 UBE2L6O14933 153 aa11.99□□□□□ -0.49
MRPL28-208ENST00000469744 RNASE13Q5GAN3 156 aaKnown RBP11.99□□□□□ -0.49
MRPL28-208ENST00000469744 TMEM101Q96IK0 257 aa11.99□□□□□ -0.49
MRPL28-208ENST00000469744 DNAH11Q96DT5 4516 aa11.99□□□□□ -0.49
MRPL28-208ENST00000469744 LOC100131303A0A0U1RQF7 123 aa11.98□□□□□ -0.49
MRPL28-208ENST00000469744 TTC32Q5I0X7 151 aa11.98□□□□□ -0.49
MRPL28-208ENST00000469744 RAB37Q96AX2 223 aa11.98□□□□□ -0.49
MRPL28-208ENST00000469744 DYNC1H1Q14204 4646 aaKnown RBP11.97□□□□□ -0.49
MRPL28-208ENST00000469744 TRBV6-8A0A0A6YYG3 113 aa11.97□□□□□ -0.49
MRPL28-208ENST00000469744 GAGE10A6NGK3 116 aa11.96□□□□□ -0.49
MRPL28-208ENST00000469744 K7EP34 96 aa11.96□□□□□ -0.49
MRPL28-208ENST00000469744 IGHV3-30P01768 117 aa11.96□□□□□ -0.49
MRPL28-208ENST00000469744 IGHV3-30-5P0DP03 117 aa11.96□□□□□ -0.49
MRPL28-208ENST00000469744 MRPL23Q16540 153 aaKnown RBP11.96□□□□□ -0.49
MRPL28-208ENST00000469744 TMEM238C9JI98 176 aa11.95□□□□□ -0.5
MRPL28-208ENST00000469744 FABP2P12104 132 aa11.95□□□□□ -0.5
MRPL28-208ENST00000469744 GYPEP15421 78 aa11.95□□□□□ -0.5
MRPL28-208ENST00000469744 LINC00242Q5T6M2 205 aa11.95□□□□□ -0.5
MRPL28-208ENST00000469744 LYPD5Q6UWN5 251 aa11.95□□□□□ -0.5
MRPL28-208ENST00000469744 A0A0J9YXY3 114 aa11.94□□□□□ -0.5
MRPL28-208ENST00000469744 K7ERJ3 54 aa11.94□□□□□ -0.5
MRPL28-208ENST00000469744 C10orf126Q8N4M7 172 aa11.94□□□□□ -0.5
MRPL28-208ENST00000469744 CDKN2A-AS1Q9UH64 79 aa11.94□□□□□ -0.5
MRPL28-208ENST00000469744 IGHV3-64A0A075B6Q5 118 aa11.93□□□□□ -0.5
MRPL28-208ENST00000469744 TRAV8-3A0A0A6YYJ7 113 aa11.93□□□□□ -0.5
MRPL28-208ENST00000469744 IGLV5-39A0A0G2JS06 123 aa11.93□□□□□ -0.5
MRPL28-208ENST00000469744 TIMM17BO60830 172 aa11.93□□□□□ -0.5
MRPL28-208ENST00000469744 ATP6V0E2Q8NHE4 81 aa11.93□□□□□ -0.5
MRPL28-208ENST00000469744 SPINK8P0C7L1 97 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms