RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 C10orf126Q8N4M7 172 aa5.48□□□□□ -1.53
NPHP3-204ENST00000469232 LYSTQ99698 3801 aa5.48□□□□□ -1.53
NPHP3-204ENST00000469232 C2orf88Q9BSF0 95 aa5.48□□□□□ -1.53
NPHP3-204ENST00000469232 MRPL35Q9NZE8 188 aaKnown RBP5.48□□□□□ -1.53
NPHP3-204ENST00000469232 CHTOPQ9Y3Y2 248 aaKnown RBP5.48□□□□□ -1.53
NPHP3-204ENST00000469232 TRAV8-4A0A0B4J246 113 aa5.48□□□□□ -1.53
NPHP3-204ENST00000469232 IGHV3OR16-9A0A0B4J2B5 98 aa5.48□□□□□ -1.53
NPHP3-204ENST00000469232 DPM2O94777 84 aa5.48□□□□□ -1.53
NPHP3-204ENST00000469232 PLNP26678 52 aa5.48□□□□□ -1.53
NPHP3-204ENST00000469232 SEC11AP67812 179 aa5.48□□□□□ -1.53
NPHP3-204ENST00000469232 REG3AQ06141 175 aa5.48□□□□□ -1.53
NPHP3-204ENST00000469232 MIAQ16674 131 aa5.48□□□□□ -1.53
NPHP3-204ENST00000469232 RNASE13Q5GAN3 156 aaKnown RBP5.48□□□□□ -1.53
NPHP3-204ENST00000469232 LINC01561Q8N1V8 128 aa5.48□□□□□ -1.53
NPHP3-204ENST00000469232 LINC00269Q8N2A0 174 aa5.48□□□□□ -1.53
NPHP3-204ENST00000469232 SACSQ9NZJ4 4579 aa5.47□□□□□ -1.53
NPHP3-204ENST00000469232 A0A0J9YXV3 536 aa5.47□□□□□ -1.53
NPHP3-204ENST00000469232 C20orf202A1L168 122 aa5.47□□□□□ -1.53
NPHP3-204ENST00000469232 C11orf86A6NJI1 115 aa5.47□□□□□ -1.53
NPHP3-204ENST00000469232 ANGP03950 147 aaKnown RBP5.47□□□□□ -1.53
NPHP3-204ENST00000469232 SMIM6P0DI80 62 aa5.47□□□□□ -1.53
NPHP3-204ENST00000469232 KRTAP1-5Q9BYS1 174 aa5.47□□□□□ -1.53
NPHP3-204ENST00000469232 KLK12Q9UKR0 248 aa5.47□□□□□ -1.53
NPHP3-204ENST00000469232 IGHV3-30P01768 117 aa5.46□□□□□ -1.54
NPHP3-204ENST00000469232 IGHV3-33P01772 117 aa5.46□□□□□ -1.54
NPHP3-204ENST00000469232 IGKCP01834 107 aa5.46□□□□□ -1.54
NPHP3-204ENST00000469232 IGHV3-30-3P0DP02 117 aa5.46□□□□□ -1.54
NPHP3-204ENST00000469232 IGHV3-30-5P0DP03 117 aa5.46□□□□□ -1.54
NPHP3-204ENST00000469232 ZNF22P17026 224 aaPredicted RBP5.46□□□□□ -1.54
NPHP3-204ENST00000469232 HERVK_113P63121 156 aa5.46□□□□□ -1.54
NPHP3-204ENST00000469232 Q6ZR54 194 aa5.46□□□□□ -1.54
NPHP3-204ENST00000469232 LINC00476Q8WZB0 136 aa5.46□□□□□ -1.54
NPHP3-204ENST00000469232 TRAV9-2A0A087WT02 112 aa5.45□□□□□ -1.54
NPHP3-204ENST00000469232 TRAV8-3A0A0A6YYJ7 113 aa5.45□□□□□ -1.54
NPHP3-204ENST00000469232 NBDYA0A0U1RRE5 68 aa5.45□□□□□ -1.54
NPHP3-204ENST00000469232 COX6A2Q02221 97 aa5.45□□□□□ -1.54
NPHP3-204ENST00000469232 CD164L2Q6UWJ8 174 aa5.45□□□□□ -1.54
NPHP3-204ENST00000469232 DNAH2Q9P225 4427 aa5.45□□□□□ -1.54
NPHP3-204ENST00000469232 A0A087WZ39 114 aa5.45□□□□□ -1.54
NPHP3-204ENST00000469232 TRAV13-1A0A0B4J241 112 aa5.45□□□□□ -1.54
NPHP3-204ENST00000469232 IGLV5-39A0A0G2JS06 123 aa5.45□□□□□ -1.54
NPHP3-204ENST00000469232 FOXI1Q12951 378 aa5.45□□□□□ -1.54
NPHP3-204ENST00000469232 SS18Q15532 418 aa5.45□□□□□ -1.54
NPHP3-204ENST00000469232 TTC32Q5I0X7 151 aa5.45□□□□□ -1.54
NPHP3-204ENST00000469232 UBE2DNLQ8IWF7 75 aa5.45□□□□□ -1.54
NPHP3-204ENST00000469232 CHAC1Q9BUX1 264 aa5.45□□□□□ -1.54
NPHP3-204ENST00000469232 KRTAP4-9Q9BYQ8 210 aa5.45□□□□□ -1.54
NPHP3-204ENST00000469232 TMEM223A0PJW6 202 aa5.44□□□□□ -1.54
NPHP3-204ENST00000469232 SCGB1D1O95968 90 aa5.44□□□□□ -1.54
NPHP3-204ENST00000469232 CHCHD10Q8WYQ3 142 aaPredicted RBP5.44□□□□□ -1.54
NPHP3-204ENST00000469232 UBE2WQ96B02 151 aa5.44□□□□□ -1.54
NPHP3-204ENST00000469232 PMCHL2Q9BQD1 86 aa5.44□□□□□ -1.54
NPHP3-204ENST00000469232 CDKN2A-AS1Q9UH64 79 aa5.44□□□□□ -1.54
NPHP3-204ENST00000469232 Q6ZRN7 208 aaPredicted RBP5.43□□□□□ -1.54
NPHP3-204ENST00000469232 DNAH10Q8IVF4 4471 aa5.42□□□□□ -1.54
NPHP3-204ENST00000469232 DNAH17Q9UFH2 4485 aa5.42□□□□□ -1.54
NPHP3-204ENST00000469232 SMIM1B2RUZ4 78 aa5.42□□□□□ -1.54
NPHP3-204ENST00000469232 E9PLD3 99 aa5.42□□□□□ -1.54
NPHP3-204ENST00000469232 H0Y8G0 127 aa5.42□□□□□ -1.54
NPHP3-204ENST00000469232 CRPP02741 224 aa5.42□□□□□ -1.54
NPHP3-204ENST00000469232 CLPSL2Q6UWE3 100 aa5.42□□□□□ -1.54
NPHP3-204ENST00000469232 LINC00518Q8N0U6 118 aa5.42□□□□□ -1.54
NPHP3-204ENST00000469232 GEMIN7Q9H840 131 aaKnown RBP5.42□□□□□ -1.54
NPHP3-204ENST00000469232 COX11Q9Y6N1 276 aa5.42□□□□□ -1.54
NPHP3-204ENST00000469232 KMT2AQ03164 3969 aa5.42□□□□□ -1.54
NPHP3-204ENST00000469232 RMI2Q96E14 147 aa5.41□□□□□ -1.54
NPHP3-204ENST00000469232 IGHV1-58A0A0C4DH39 117 aa5.41□□□□□ -1.54
NPHP3-204ENST00000469232 GAGE12HA6NDE8 117 aa5.41□□□□□ -1.54
NPHP3-204ENST00000469232 H3BRM9 83 aa5.41□□□□□ -1.54
NPHP3-204ENST00000469232 COX7A2LO14548 114 aa5.41□□□□□ -1.54
NPHP3-204ENST00000469232 XCL1P47992 114 aa5.41□□□□□ -1.54
NPHP3-204ENST00000469232 KIAA0087Q14695 138 aa5.41□□□□□ -1.54
NPHP3-204ENST00000469232 ATOH7Q8N100 152 aa5.41□□□□□ -1.54
NPHP3-204ENST00000469232 LINC00469Q8N7U9 141 aa5.41□□□□□ -1.54
NPHP3-204ENST00000469232 STPG4Q8N801 248 aa5.41□□□□□ -1.54
NPHP3-204ENST00000469232 MAPKAPK5-AS1Q8N8E1 139 aa5.41□□□□□ -1.54
NPHP3-204ENST00000469232 C1orf43Q9BWL3 253 aa5.41□□□□□ -1.54
NPHP3-204ENST00000469232 PLA2G2DQ9UNK4 145 aa5.41□□□□□ -1.54
NPHP3-204ENST00000469232 IGLV10-54A0A075B6I4 117 aa5.4□□□□□ -1.55
NPHP3-204ENST00000469232 IGHV3-64A0A075B6Q5 118 aa5.4□□□□□ -1.55
NPHP3-204ENST00000469232 IGKV3OR2-268A0A0C4DH90 116 aa5.4□□□□□ -1.55
NPHP3-204ENST00000469232 LCE6AA0A183 80 aa5.4□□□□□ -1.55
NPHP3-204ENST00000469232 hDV102S1A0JD36 115 aa5.4□□□□□ -1.55
NPHP3-204ENST00000469232 LEPROTO15243 131 aa5.4□□□□□ -1.55
NPHP3-204ENST00000469232 MAJINQ3KP22 176 aa5.4□□□□□ -1.55
NPHP3-204ENST00000469232 TMEM170BQ5T4T1 132 aa5.4□□□□□ -1.55
NPHP3-204ENST00000469232 TM2D2Q9BX73 214 aa5.4□□□□□ -1.55
NPHP3-204ENST00000469232 IGKV2D-26A0A0A0MRZ7 120 aa5.39□□□□□ -1.55
NPHP3-204ENST00000469232 DLEU1O43261 78 aa5.39□□□□□ -1.55
NPHP3-204ENST00000469232 HERVK_113P61574 105 aa5.39□□□□□ -1.55
NPHP3-204ENST00000469232 C5orf38Q86SI9 138 aa5.39□□□□□ -1.55
NPHP3-204ENST00000469232 VAMP8Q9BV40 100 aa5.39□□□□□ -1.55
NPHP3-204ENST00000469232 GVQW2A0A096LPI5 108 aaPredicted RBP5.38□□□□□ -1.55
NPHP3-204ENST00000469232 F8WDY8 70 aa5.38□□□□□ -1.55
NPHP3-204ENST00000469232 SPINK8P0C7L1 97 aa5.38□□□□□ -1.55
NPHP3-204ENST00000469232 Q8IZM0 81 aa5.38□□□□□ -1.55
NPHP3-204ENST00000469232 C15orf56Q8N910 161 aa5.38□□□□□ -1.55
NPHP3-204ENST00000469232 PLEKHB2Q96CS7 222 aa5.38□□□□□ -1.55
NPHP3-204ENST00000469232 C12orf57Q99622 126 aa5.38□□□□□ -1.55
NPHP3-204ENST00000469232 IGKV2D-24A0A075B6R9 120 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms