RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 Q8IYB0 196 aa2.15□□□□□ -2.07
HMGB1P25-201ENST00000468402 FAM213BQ8TBF2 198 aa2.15□□□□□ -2.07
HMGB1P25-201ENST00000468402 SFT2D1Q8WV19 159 aa2.15□□□□□ -2.07
HMGB1P25-201ENST00000468402 FAM103A1Q9BTL3 118 aaKnown RBP2.15□□□□□ -2.07
HMGB1P25-201ENST00000468402 SEC11CQ9BY50 192 aa2.15□□□□□ -2.07
HMGB1P25-201ENST00000468402 REG4Q9BYZ8 158 aa2.15□□□□□ -2.07
HMGB1P25-201ENST00000468402 NMES1Q9C002 83 aa2.15□□□□□ -2.07
HMGB1P25-201ENST00000468402 PRO0461Q9UI25 63 aa2.15□□□□□ -2.07
HMGB1P25-201ENST00000468402 SPTAN1Q13813 2472 aaKnown RBP2.15□□□□□ -2.07
HMGB1P25-201ENST00000468402 AKAP9Q99996 3911 aa2.14□□□□□ -2.07
HMGB1P25-201ENST00000468402 CFAP46Q8IYW2 2715 aa2.14□□□□□ -2.07
HMGB1P25-201ENST00000468402 ANKHD1Q8IWZ3 2542 aaKnown RBP2.14□□□□□ -2.07
HMGB1P25-201ENST00000468402 PSCAO43653 123 aa2.14□□□□□ -2.07
HMGB1P25-201ENST00000468402 HYPMO75409 117 aa2.14□□□□□ -2.07
HMGB1P25-201ENST00000468402 NMBP08949 121 aa2.14□□□□□ -2.07
HMGB1P25-201ENST00000468402 SPINK8P0C7L1 97 aa2.14□□□□□ -2.07
HMGB1P25-201ENST00000468402 KRTAP10-3P60369 221 aa2.14□□□□□ -2.07
HMGB1P25-201ENST00000468402 UBA52P62987 128 aaKnown RBP2.14□□□□□ -2.07
HMGB1P25-201ENST00000468402 CATR1Q13166 79 aa2.14□□□□□ -2.07
HMGB1P25-201ENST00000468402 ESRGQ1W209 222 aa2.14□□□□□ -2.07
HMGB1P25-201ENST00000468402 KRTAP25-1Q3LHN0 102 aa2.14□□□□□ -2.07
HMGB1P25-201ENST00000468402 HCP5Q6MZN7 132 aa2.14□□□□□ -2.07
HMGB1P25-201ENST00000468402 VMO1Q7Z5L0 202 aa2.14□□□□□ -2.07
HMGB1P25-201ENST00000468402 LINC00311Q8N616 119 aa2.14□□□□□ -2.07
HMGB1P25-201ENST00000468402 CCL19Q99731 98 aa2.14□□□□□ -2.07
HMGB1P25-201ENST00000468402 BPESC1Q9GZL8 116 aa2.14□□□□□ -2.07
HMGB1P25-201ENST00000468402 SLC35B3Q9H1N7 401 aa2.14□□□□□ -2.07
HMGB1P25-201ENST00000468402 RPRMQ9NS64 109 aa2.14□□□□□ -2.07
HMGB1P25-201ENST00000468402 FKBP11Q9NYL4 201 aa2.14□□□□□ -2.07
HMGB1P25-201ENST00000468402 HHLA3Q9XRX5 114 aa2.14□□□□□ -2.07
HMGB1P25-201ENST00000468402 CENPEQ02224 2701 aa2.14□□□□□ -2.07
HMGB1P25-201ENST00000468402 WNK1Q9H4A3 2382 aa2.14□□□□□ -2.07
HMGB1P25-201ENST00000468402 SPG11Q96JI7 2443 aa2.13□□□□□ -2.07
HMGB1P25-201ENST00000468402 POLQO75417 2590 aa2.13□□□□□ -2.07
HMGB1P25-201ENST00000468402 FBN2P35556 2912 aa2.13□□□□□ -2.07
HMGB1P25-201ENST00000468402 CACNA1AO00555 2505 aa2.13□□□□□ -2.07
HMGB1P25-201ENST00000468402 IGHV3-64A0A075B6Q5 118 aa2.13□□□□□ -2.07
HMGB1P25-201ENST00000468402 IGHV1-24A0A0C4DH33 117 aa2.13□□□□□ -2.07
HMGB1P25-201ENST00000468402 LOC107984156A0A0G2JMH3 177 aa2.13□□□□□ -2.07
HMGB1P25-201ENST00000468402 HMSDA8MTL9 139 aa2.13□□□□□ -2.07
HMGB1P25-201ENST00000468402 SNCGO76070 127 aa2.13□□□□□ -2.07
HMGB1P25-201ENST00000468402 APOC3P02656 99 aa2.13□□□□□ -2.07
HMGB1P25-201ENST00000468402 MGST1P10620 155 aaKnown RBP2.13□□□□□ -2.07
HMGB1P25-201ENST00000468402 CRYGAP11844 174 aa2.13□□□□□ -2.07
HMGB1P25-201ENST00000468402 PLGLAQ15195 96 aa2.13□□□□□ -2.07
HMGB1P25-201ENST00000468402 NMSQ5H8A3 153 aa2.13□□□□□ -2.07
HMGB1P25-201ENST00000468402 PRR9Q5T870 116 aa2.13□□□□□ -2.07
HMGB1P25-201ENST00000468402 MIC13Q5XKP0 118 aa2.13□□□□□ -2.07
HMGB1P25-201ENST00000468402 ARL17AQ8IVW1 177 aa2.13□□□□□ -2.07
HMGB1P25-201ENST00000468402 C3orf56Q8N813 242 aa2.13□□□□□ -2.07
HMGB1P25-201ENST00000468402 OR8B3Q8NGG8 313 aa2.13□□□□□ -2.07
HMGB1P25-201ENST00000468402 NABP2Q9BQ15 211 aa2.13□□□□□ -2.07
HMGB1P25-201ENST00000468402 SMIM7Q9BQ49 75 aa2.13□□□□□ -2.07
HMGB1P25-201ENST00000468402 AGPAT4-IT1Q9H0P7 198 aa2.13□□□□□ -2.07
HMGB1P25-201ENST00000468402 MRPL36Q9P0J6 103 aaKnown RBP2.13□□□□□ -2.07
HMGB1P25-201ENST00000468402 METTL1Q9UBP6 276 aaKnown RBP2.13□□□□□ -2.07
HMGB1P25-201ENST00000468402 MINOS1-NBL1R4GNA1 71 aa2.13□□□□□ -2.07
HMGB1P25-201ENST00000468402 FAM208BQ5VWN6 2430 aa2.13□□□□□ -2.07
HMGB1P25-201ENST00000468402 SVEP1Q4LDE5 3571 aa2.13□□□□□ -2.07
HMGB1P25-201ENST00000468402 ANK3Q12955 4377 aaKnown RBP2.13□□□□□ -2.07
HMGB1P25-201ENST00000468402 ZANQ9Y493 2812 aa2.13□□□□□ -2.07
HMGB1P25-201ENST00000468402 OBSCNQ5VST9 7968 aa2.12□□□□□ -2.07
HMGB1P25-201ENST00000468402 CSMD2Q7Z408 3487 aa2.12□□□□□ -2.07
HMGB1P25-201ENST00000468402 USP9XQ93008 2570 aaPredicted RBP2.12□□□□□ -2.07
HMGB1P25-201ENST00000468402 TEX15Q9BXT5 2789 aa2.12□□□□□ -2.07
HMGB1P25-201ENST00000468402 CSPG4Q6UVK1 2322 aa2.12□□□□□ -2.07
HMGB1P25-201ENST00000468402 hDV103S1A0JD37 113 aa2.12□□□□□ -2.07
HMGB1P25-201ENST00000468402 CCDC179H3BU77 68 aa2.12□□□□□ -2.07
HMGB1P25-201ENST00000468402 SLC25A6P12236 298 aa2.12□□□□□ -2.07
HMGB1P25-201ENST00000468402 COX6B1P14854 86 aa2.12□□□□□ -2.07
HMGB1P25-201ENST00000468402 ZNF22P17026 224 aaPredicted RBP2.12□□□□□ -2.07
HMGB1P25-201ENST00000468402 ADCYAP1P18509 176 aa2.12□□□□□ -2.07
HMGB1P25-201ENST00000468402 HINT1P49773 126 aaPredicted RBP2.12□□□□□ -2.07
HMGB1P25-201ENST00000468402 SS18Q15532 418 aa2.12□□□□□ -2.07
HMGB1P25-201ENST00000468402 C9orf153Q5TBE3 101 aa2.12□□□□□ -2.07
HMGB1P25-201ENST00000468402 IGFL1Q6UW32 110 aa2.12□□□□□ -2.07
HMGB1P25-201ENST00000468402 CMTM2Q8TAZ6 248 aa2.12□□□□□ -2.07
HMGB1P25-201ENST00000468402 AQP10Q96PS8 301 aa2.12□□□□□ -2.07
HMGB1P25-201ENST00000468402 RETNLBQ9BQ08 111 aa2.12□□□□□ -2.07
HMGB1P25-201ENST00000468402 C16orf95Q9H693 158 aa2.12□□□□□ -2.07
HMGB1P25-201ENST00000468402 C14orf132Q9NPU4 83 aa2.12□□□□□ -2.07
HMGB1P25-201ENST00000468402 GNG13Q9P2W3 67 aa2.12□□□□□ -2.07
HMGB1P25-201ENST00000468402 LINC00312Q9Y6C7 94 aa2.12□□□□□ -2.07
HMGB1P25-201ENST00000468402 R4GN34 69 aa2.12□□□□□ -2.07
HMGB1P25-201ENST00000468402 ZNF462Q96JM2 2506 aa2.12□□□□□ -2.07
HMGB1P25-201ENST00000468402 ZNF469Q96JG9 3925 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P25-201ENST00000468402 G3V318 75 aa2.11□□□□□ -2.07
HMGB1P25-201ENST00000468402 PITX3O75364 302 aa2.11□□□□□ -2.07
HMGB1P25-201ENST00000468402 SFTA3P0C7M3 94 aa2.11□□□□□ -2.07
HMGB1P25-201ENST00000468402 BAALC-AS2P0C853 105 aa2.11□□□□□ -2.07
HMGB1P25-201ENST00000468402 ERHP84090 104 aaKnown RBP2.11□□□□□ -2.07
HMGB1P25-201ENST00000468402 ASB16-AS1Q495Z4 193 aa2.11□□□□□ -2.07
HMGB1P25-201ENST00000468402 C10orf99Q6UWK7 81 aa2.11□□□□□ -2.07
HMGB1P25-201ENST00000468402 PATE2Q6UY27 113 aa2.11□□□□□ -2.07
HMGB1P25-201ENST00000468402 HEPN1Q6WQI6 88 aa2.11□□□□□ -2.07
HMGB1P25-201ENST00000468402 ATP11AUNQ6ZP68 121 aa2.11□□□□□ -2.07
HMGB1P25-201ENST00000468402 ZNF833PQ6ZTB9 187 aa2.11□□□□□ -2.07
HMGB1P25-201ENST00000468402 Q6ZUT4 128 aa2.11□□□□□ -2.07
HMGB1P25-201ENST00000468402 TTC9CQ8N5M4 171 aa2.11□□□□□ -2.07
HMGB1P25-201ENST00000468402 OR4X2Q8NGF9 303 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms