RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 WFDC2Q14508 124 aa0.23□□□□□ -2.37
VPS13A-209ENST00000467124 C10orf113Q5VZT2 155 aa0.23□□□□□ -2.37
VPS13A-209ENST00000467124 UBR5O95071 2799 aaPredicted RBP0.23□□□□□ -2.37
VPS13A-209ENST00000467124 IGSF10Q6WRI0 2623 aa0.23□□□□□ -2.37
VPS13A-209ENST00000467124 BIVM-ERCC5R4GMW8 1640 aa0.23□□□□□ -2.37
VPS13A-209ENST00000467124 HMGXB3Q12766 1538 aa0.23□□□□□ -2.37
VPS13A-209ENST00000467124 TRBV6-1A0A0K0K1D8 114 aa0.22□□□□□ -2.37
VPS13A-209ENST00000467124 GNGT2O14610 69 aa0.22□□□□□ -2.37
VPS13A-209ENST00000467124 COX6CP09669 75 aa0.22□□□□□ -2.37
VPS13A-209ENST00000467124 S100A10P60903 97 aa0.22□□□□□ -2.37
VPS13A-209ENST00000467124 LCN9Q8WX39 176 aa0.22□□□□□ -2.37
VPS13A-209ENST00000467124 USF3Q68DE3 2245 aa0.21□□□□□ -2.38
VPS13A-209ENST00000467124 A0A1B0GWA3 101 aa0.21□□□□□ -2.38
VPS13A-209ENST00000467124 TMEM218A2RU14 115 aa0.21□□□□□ -2.38
VPS13A-209ENST00000467124 TMEM262E9PQX1 116 aa0.21□□□□□ -2.38
VPS13A-209ENST00000467124 DEFB109BQ30KR1 87 aa0.21□□□□□ -2.38
VPS13A-209ENST00000467124 TMEM263Q8WUH6 116 aaKnown RBP0.21□□□□□ -2.38
VPS13A-209ENST00000467124 SPRR4Q96PI1 79 aa0.21□□□□□ -2.38
VPS13A-209ENST00000467124 CGREF1Q99674 301 aa0.21□□□□□ -2.38
VPS13A-209ENST00000467124 TCEAL7Q9BRU2 100 aa0.21□□□□□ -2.38
VPS13A-209ENST00000467124 MAPKBP1O60336 1514 aa0.21□□□□□ -2.38
VPS13A-209ENST00000467124 EHBP1L1Q8N3D4 1523 aa0.21□□□□□ -2.38
VPS13A-209ENST00000467124 SHANK2Q9UPX8 1470 aa0.21□□□□□ -2.38
VPS13A-209ENST00000467124 SPHKAPQ2M3C7 1700 aa0.21□□□□□ -2.38
VPS13A-209ENST00000467124 DMBT1Q9UGM3 2413 aaPredicted RBP0.21□□□□□ -2.38
VPS13A-209ENST00000467124 TOP2BQ02880 1626 aa0.2□□□□□ -2.38
VPS13A-209ENST00000467124 PEG3Q9GZU2 1588 aa0.2□□□□□ -2.38
VPS13A-209ENST00000467124 ARHGEF12Q9NZN5 1544 aa0.2□□□□□ -2.38
VPS13A-209ENST00000467124 GOLGA4Q13439 2230 aaKnown RBP0.2□□□□□ -2.38
VPS13A-209ENST00000467124 H3BQ15 152 aa0.2□□□□□ -2.38
VPS13A-209ENST00000467124 KRTDAPP60985 99 aa0.2□□□□□ -2.38
VPS13A-209ENST00000467124 LINC01600Q96MT4 127 aa0.2□□□□□ -2.38
VPS13A-209ENST00000467124 ABCC5O15440 1437 aa0.2□□□□□ -2.38
VPS13A-209ENST00000467124 HRNRQ86YZ3 2850 aaPredicted RBP0.2□□□□□ -2.38
VPS13A-209ENST00000467124 CELSR1Q9NYQ6 3014 aa0.19□□□□□ -2.38
VPS13A-209ENST00000467124 MYO7BQ6PIF6 2116 aa0.19□□□□□ -2.38
VPS13A-209ENST00000467124 WNK2Q9Y3S1 2297 aa0.19□□□□□ -2.38
VPS13A-209ENST00000467124 POLA1P09884 1462 aaPredicted RBP0.19□□□□□ -2.38
VPS13A-209ENST00000467124 PIGYQ3MUY2 71 aa0.19□□□□□ -2.38
VPS13A-209ENST00000467124 NHSL1Q5SYE7 1610 aa0.19□□□□□ -2.38
VPS13A-209ENST00000467124 PKDREJQ9NTG1 2253 aa0.18□□□□□ -2.38
VPS13A-209ENST00000467124 HIVEP3Q5T1R4 2406 aa0.18□□□□□ -2.38
VPS13A-209ENST00000467124 SCN7AQ01118 1682 aa0.18□□□□□ -2.38
VPS13A-209ENST00000467124 A0A0G2JND7 137 aa0.18□□□□□ -2.38
VPS13A-209ENST00000467124 ASIPP42127 132 aa0.18□□□□□ -2.38
VPS13A-209ENST00000467124 RAPGEF6Q8TEU7 1601 aa0.17□□□□□ -2.38
VPS13A-209ENST00000467124 MT-ATP8P03928 68 aa0.17□□□□□ -2.38
VPS13A-209ENST00000467124 SPRR1AP35321 89 aa0.17□□□□□ -2.38
VPS13A-209ENST00000467124 RBP2P50120 134 aa0.17□□□□□ -2.38
VPS13A-209ENST00000467124 ADGRL2O95490 1459 aa0.16□□□□□ -2.38
VPS13A-209ENST00000467124 TRAV30A0A087WSZ9 112 aa0.16□□□□□ -2.38
VPS13A-209ENST00000467124 ZFYVE16Q7Z3T8 1539 aa0.16□□□□□ -2.38
VPS13A-209ENST00000467124 PAPPAQ13219 1627 aa0.16□□□□□ -2.38
VPS13A-209ENST00000467124 A0A087WVE0 104 aa0.15□□□□□ -2.39
VPS13A-209ENST00000467124 PRO1933Q9H354 126 aa0.15□□□□□ -2.39
VPS13A-209ENST00000467124 AP4S1Q9Y587 144 aa0.15□□□□□ -2.39
VPS13A-209ENST00000467124 PPRC1Q5VV67 1664 aaKnown RBP0.14□□□□□ -2.39
VPS13A-209ENST00000467124 LINC00959A0A1B0GUT2 108 aa0.14□□□□□ -2.39
VPS13A-209ENST00000467124 SAA2P0DJI9 122 aaPredicted RBP0.14□□□□□ -2.39
VPS13A-209ENST00000467124 Q5VSD8 79 aa0.14□□□□□ -2.39
VPS13A-209ENST00000467124 PMCHL2Q9BQD1 86 aa0.14□□□□□ -2.39
VPS13A-209ENST00000467124 SPTBN1Q01082 2364 aaKnown RBP0.14□□□□□ -2.39
VPS13A-209ENST00000467124 NCOR1O75376 2440 aa0.13□□□□□ -2.39
VPS13A-209ENST00000467124 ABCA2Q9BZC7 2435 aa0.13□□□□□ -2.39
VPS13A-209ENST00000467124 C7orf77A4D0Y5 90 aa0.13□□□□□ -2.39
VPS13A-209ENST00000467124 MPC2O95563 127 aa0.13□□□□□ -2.39
VPS13A-209ENST00000467124 NCMAPQ5T1S8 102 aa0.13□□□□□ -2.39
VPS13A-209ENST00000467124 SPRR2GQ9BYE4 73 aa0.13□□□□□ -2.39
VPS13A-209ENST00000467124 CACFD1Q9UGQ2 172 aa0.13□□□□□ -2.39
VPS13A-209ENST00000467124 DOPEY2Q9Y3R5 2298 aa0.13□□□□□ -2.39
VPS13A-209ENST00000467124 C1orf167Q5SNV9 1468 aa0.12□□□□□ -2.39
VPS13A-209ENST00000467124 NLRP1Q9C000 1473 aa0.12□□□□□ -2.39
VPS13A-209ENST00000467124 FXYD6Q9H0Q3 95 aa0.12□□□□□ -2.39
VPS13A-209ENST00000467124 MAGI1Q96QZ7 1491 aaPredicted RBP0.11□□□□□ -2.39
VPS13A-209ENST00000467124 GVINP1Q7Z2Y8 2422 aa0.11□□□□□ -2.39
VPS13A-209ENST00000467124 TRBV7-4A0A0J9YYF1 115 aa0.11□□□□□ -2.39
VPS13A-209ENST00000467124 VAMP8Q9BV40 100 aa0.11□□□□□ -2.39
VPS13A-209ENST00000467124 CNTLNQ9NXG0 1405 aa0.11□□□□□ -2.39
VPS13A-209ENST00000467124 TOPAZ1Q8N9V7 1692 aa0.11□□□□□ -2.39
VPS13A-209ENST00000467124 ABCA3Q99758 1704 aa0.1□□□□□ -2.39
VPS13A-209ENST00000467124 CSMD3Q7Z407 3707 aa0.1□□□□□ -2.39
VPS13A-209ENST00000467124 COL7A1Q02388 2944 aa0.1□□□□□ -2.39
VPS13A-209ENST00000467124 COX6B1P14854 86 aa0.1□□□□□ -2.39
VPS13A-209ENST00000467124 SPRR1BP22528 89 aa0.1□□□□□ -2.39
VPS13A-209ENST00000467124 CHD1O14646 1710 aa0.1□□□□□ -2.39
VPS13A-209ENST00000467124 DEFB107AQ8IZN7 70 aa0.09□□□□□ -2.4
VPS13A-209ENST00000467124 MACF1Q9UPN3 7388 aaKnown RBP0.09□□□□□ -2.4
VPS13A-209ENST00000467124 SSPOA2VEC9 5147 aa0.09□□□□□ -2.4
VPS13A-209ENST00000467124 DIP2CQ9Y2E4 1556 aa0.09□□□□□ -2.4
VPS13A-209ENST00000467124 ANKRD36BQ8N2N9 1353 aa0.08□□□□□ -2.4
VPS13A-209ENST00000467124 PSMG4Q5JS54 123 aa0.08□□□□□ -2.4
VPS13A-209ENST00000467124 CHD6Q8TD26 2715 aa0.08□□□□□ -2.4
VPS13A-209ENST00000467124 COL4A6Q14031 1691 aa0.08□□□□□ -2.4
VPS13A-209ENST00000467124 PTPN13Q12923 2485 aa0.07□□□□□ -2.4
VPS13A-209ENST00000467124 PMCHL1Q16048 86 aa0.07□□□□□ -2.4
VPS13A-209ENST00000467124 DEFB123Q8N688 67 aa0.07□□□□□ -2.4
VPS13A-209ENST00000467124 CACNA1AO00555 2505 aa0.07□□□□□ -2.4
VPS13A-209ENST00000467124 MLH3Q9UHC1 1453 aa0.06□□□□□ -2.4
VPS13A-209ENST00000467124 FAUP35544 74 aaKnown RBP0.06□□□□□ -2.4
VPS13A-209ENST00000467124 COL5A1-AS1Q5SY13 56 aa0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms