RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 TIMM21Q9BVV7 248 aa11.13□□□□□ -0.63
SNED1-208ENST00000466618 KLK5Q9Y337 293 aaPredicted RBP11.13□□□□□ -0.63
SNED1-208ENST00000466618 M0QY20 66 aa11.13□□□□□ -0.63
SNED1-208ENST00000466618 DCANP1Q8TF63 244 aa11.13□□□□□ -0.63
SNED1-208ENST00000466618 FAM74A4Q5TZK3 123 aa11.12□□□□□ -0.63
SNED1-208ENST00000466618 TRAV25A0A0B4J276 109 aa11.11□□□□□ -0.63
SNED1-208ENST00000466618 C5orf47Q569G3 176 aa11.11□□□□□ -0.63
SNED1-208ENST00000466618 FAM104AQ969W3 186 aa11.11□□□□□ -0.63
SNED1-208ENST00000466618 KLLNB2CW77 178 aa11.11□□□□□ -0.63
SNED1-208ENST00000466618 SDIM1Q6ZPB5 146 aa11.1□□□□□ -0.63
SNED1-208ENST00000466618 LINC00643Q86TS7 51 aa11.1□□□□□ -0.63
SNED1-208ENST00000466618 NDUFA12Q9UI09 145 aa11.1□□□□□ -0.63
SNED1-208ENST00000466618 IGHV1-58A0A0C4DH39 117 aa11.1□□□□□ -0.63
SNED1-208ENST00000466618 MRPS36P82909 103 aaKnown RBP11.1□□□□□ -0.63
SNED1-208ENST00000466618 SMIM9A6NGZ8 99 aa11.09□□□□□ -0.63
SNED1-208ENST00000466618 RPL11P62913 178 aaKnown RBP11.09□□□□□ -0.63
SNED1-208ENST00000466618 OXLD1Q5BKU9 147 aa11.09□□□□□ -0.63
SNED1-208ENST00000466618 A0A1B0GX51 115 aa11.09□□□□□ -0.63
SNED1-208ENST00000466618 A8MZ25 164 aa11.09□□□□□ -0.63
SNED1-208ENST00000466618 J3KT08 172 aa11.09□□□□□ -0.63
SNED1-208ENST00000466618 ATP5G1P05496 136 aa11.08□□□□□ -0.64
SNED1-208ENST00000466618 FAM19A5Q7Z5A7 132 aaPredicted RBP11.08□□□□□ -0.64
SNED1-208ENST00000466618 IGKV3-7A0A075B6H7 116 aa11.07□□□□□ -0.64
SNED1-208ENST00000466618 C5orf38Q86SI9 138 aa11.07□□□□□ -0.64
SNED1-208ENST00000466618 C2orf48Q96LS8 159 aa11.07□□□□□ -0.64
SNED1-208ENST00000466618 C9orf85Q96MD7 179 aa11.07□□□□□ -0.64
SNED1-208ENST00000466618 NOTCH3Q9UM47 2321 aa11.07□□□□□ -0.64
SNED1-208ENST00000466618 K7EQG2 157 aa11.07□□□□□ -0.64
SNED1-208ENST00000466618 COX7CP15954 63 aa11.06□□□□□ -0.64
SNED1-208ENST00000466618 EGFEM1PQ0D2K5 195 aa11.06□□□□□ -0.64
SNED1-208ENST00000466618 BEAN1Q3B7T3 259 aa11.06□□□□□ -0.64
SNED1-208ENST00000466618 VSIG2Q96IQ7 327 aa11.06□□□□□ -0.64
SNED1-208ENST00000466618 IGHV3-16A0A0C4DH30 117 aa11.05□□□□□ -0.64
SNED1-208ENST00000466618 DAND5Q8N907 189 aa11.05□□□□□ -0.64
SNED1-208ENST00000466618 DNAH3Q8TD57 4116 aa11.05□□□□□ -0.64
SNED1-208ENST00000466618 MGAM2Q2M2H8 2515 aa11.05□□□□□ -0.64
SNED1-208ENST00000466618 TRAV12-3A0A0B4J271 114 aa11.04□□□□□ -0.64
SNED1-208ENST00000466618 CXCL5P42830 114 aa11.04□□□□□ -0.64
SNED1-208ENST00000466618 PYGO1Q9Y3Y4 419 aa11.04□□□□□ -0.64
SNED1-208ENST00000466618 CRYGAP11844 174 aa11.04□□□□□ -0.64
SNED1-208ENST00000466618 RNASE13Q5GAN3 156 aaKnown RBP11.04□□□□□ -0.64
SNED1-208ENST00000466618 C22orf24Q9Y442 160 aa11.04□□□□□ -0.64
SNED1-208ENST00000466618 COX7A2LO14548 114 aa11.03□□□□□ -0.64
SNED1-208ENST00000466618 TIMM17BO60830 172 aa11.03□□□□□ -0.64
SNED1-208ENST00000466618 DAZ2Q13117 558 aaKnown RBP11.03□□□□□ -0.64
SNED1-208ENST00000466618 DAZ4Q86SG3 579 aaKnown RBP11.03□□□□□ -0.64
SNED1-208ENST00000466618 DAZ3Q9NR90 486 aaKnown RBP11.03□□□□□ -0.64
SNED1-208ENST00000466618 KRTAP10-11P60412 298 aa11.03□□□□□ -0.64
SNED1-208ENST00000466618 HIST1H4AP62805 103 aaKnown RBP11.03□□□□□ -0.64
SNED1-208ENST00000466618 C19orf73Q9NVV2 129 aa11.02□□□□□ -0.65
SNED1-208ENST00000466618 NBEAL1Q6ZS30 2694 aa11.02□□□□□ -0.65
SNED1-208ENST00000466618 TINCRA0A1B0GVN0 87 aa11.01□□□□□ -0.65
SNED1-208ENST00000466618 KPRPQ5T749 579 aaPredicted RBP11.01□□□□□ -0.65
SNED1-208ENST00000466618 CYSTM1Q9H1C7 97 aa11.01□□□□□ -0.65
SNED1-208ENST00000466618 RPS28P62857 69 aaKnown RBP11.01□□□□□ -0.65
SNED1-208ENST00000466618 ODF3L2Q3SX64 289 aa11.01□□□□□ -0.65
SNED1-208ENST00000466618 GAGE2AQ6NT46 116 aa11.01□□□□□ -0.65
SNED1-208ENST00000466618 EDA2RQ9HAV5 297 aa11.01□□□□□ -0.65
SNED1-208ENST00000466618 MAP6D1Q9H9H5 199 aa11□□□□□ -0.65
SNED1-208ENST00000466618 SNRPD3P62318 126 aaKnown RBP11□□□□□ -0.65
SNED1-208ENST00000466618 TIRAPP58753 221 aa10.99□□□□□ -0.65
SNED1-208ENST00000466618 hADV29S1A0JD25 119 aa10.99□□□□□ -0.65
SNED1-208ENST00000466618 CMC4P56277 68 aaPredicted RBP10.98□□□□□ -0.65
SNED1-208ENST00000466618 DEFB131AP59861 70 aa10.98□□□□□ -0.65
SNED1-208ENST00000466618 LINC00308Q8TCZ7 52 aa10.98□□□□□ -0.65
SNED1-208ENST00000466618 NOTCH1P46531 2555 aa10.97□□□□□ -0.65
SNED1-208ENST00000466618 TRAV12-2A0A075B6T6 113 aa10.97□□□□□ -0.65
SNED1-208ENST00000466618 ATOX1O00244 68 aa10.97□□□□□ -0.65
SNED1-208ENST00000466618 NDUFA1O15239 70 aa10.97□□□□□ -0.65
SNED1-208ENST00000466618 TRACP01848 142 aa10.97□□□□□ -0.65
SNED1-208ENST00000466618 BAALC-AS2P0C853 105 aa10.97□□□□□ -0.65
SNED1-208ENST00000466618 FAM218AQ96MZ4 157 aa10.96□□□□□ -0.66
SNED1-208ENST00000466618 WFDC10AQ9H1F0 79 aa10.96□□□□□ -0.66
SNED1-208ENST00000466618 SOSTDC1Q6X4U4 206 aa10.95□□□□□ -0.66
SNED1-208ENST00000466618 OR13C6PQ8NH95 151 aa10.95□□□□□ -0.66
SNED1-208ENST00000466618 UBE2D4Q9Y2X8 147 aa10.95□□□□□ -0.66
SNED1-208ENST00000466618 FAM222AQ5U5X8 452 aa10.94□□□□□ -0.66
SNED1-208ENST00000466618 KIR2DL5BQ8NHK3 375 aa10.94□□□□□ -0.66
SNED1-208ENST00000466618 CHCHD7Q9BUK0 85 aa10.94□□□□□ -0.66
SNED1-208ENST00000466618 CDKN2A-AS1Q9UH64 79 aa10.94□□□□□ -0.66
SNED1-208ENST00000466618 IGHV1OR15-1A0A075B7D0 117 aa10.93□□□□□ -0.66
SNED1-208ENST00000466618 KNCNA6PVL3 124 aa10.93□□□□□ -0.66
SNED1-208ENST00000466618 OXTP01178 125 aa10.93□□□□□ -0.66
SNED1-208ENST00000466618 DPH3Q96FX2 82 aa10.93□□□□□ -0.66
SNED1-208ENST00000466618 INAFM2P0DMQ5 153 aa10.92□□□□□ -0.66
SNED1-208ENST00000466618 RPL18AQ02543 176 aaKnown RBP10.92□□□□□ -0.66
SNED1-208ENST00000466618 SORL1Q92673 2214 aa10.92□□□□□ -0.66
SNED1-208ENST00000466618 IGLV5-45A0A087WSX0 123 aa10.92□□□□□ -0.66
SNED1-208ENST00000466618 IGHV3-73A0A0B4J1V6 119 aa10.92□□□□□ -0.66
SNED1-208ENST00000466618 A8MTW9 85 aa10.92□□□□□ -0.66
SNED1-208ENST00000466618 IGKV3-20P01619 116 aa10.92□□□□□ -0.66
SNED1-208ENST00000466618 UPK3BQ9BT76 320 aa10.92□□□□□ -0.66
SNED1-208ENST00000466618 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.91□□□□□ -0.66
SNED1-208ENST00000466618 IGKV2-29A2NJV5 120 aaPredicted RBP10.91□□□□□ -0.66
SNED1-208ENST00000466618 CIRBPQ14011 172 aaKnown RBP10.91□□□□□ -0.66
SNED1-208ENST00000466618 Q9UF83 564 aa10.91□□□□□ -0.66
SNED1-208ENST00000466618 A0A0U1RRA0 63 aa10.9□□□□□ -0.66
SNED1-208ENST00000466618 TMEM258P61165 79 aa10.9□□□□□ -0.66
SNED1-208ENST00000466618 Q9H8V8 135 aa10.9□□□□□ -0.66
SNED1-208ENST00000466618 TRAV13-1A0A0B4J241 112 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms