RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 GYPEP15421 78 aa9.57□□□□□ -0.88
HDAC6-215ENST00000465457 COL5A1-AS1Q5SY13 56 aa9.57□□□□□ -0.88
HDAC6-215ENST00000465457 TMEM170BQ5T4T1 132 aa9.57□□□□□ -0.88
HDAC6-215ENST00000465457 C2orf91Q6ZV80 131 aa9.57□□□□□ -0.88
HDAC6-215ENST00000465457 PCP2Q8IVA1 136 aa9.57□□□□□ -0.88
HDAC6-215ENST00000465457 ATP6V0E2Q8NHE4 81 aa9.57□□□□□ -0.88
HDAC6-215ENST00000465457 UBR4Q5T4S7 5183 aa9.56□□□□□ -0.88
HDAC6-215ENST00000465457 LOC100131303A0A0U1RQF7 123 aa9.56□□□□□ -0.88
HDAC6-215ENST00000465457 HSD52Q0P140 79 aa9.56□□□□□ -0.88
HDAC6-215ENST00000465457 Q6ZUT4 128 aa9.56□□□□□ -0.88
HDAC6-215ENST00000465457 Q8N1X5 172 aa9.56□□□□□ -0.88
HDAC6-215ENST00000465457 OPRPNQ99935 248 aaPredicted RBP9.56□□□□□ -0.88
HDAC6-215ENST00000465457 MYMXA0A1B0GTQ4 84 aa9.55□□□□□ -0.88
HDAC6-215ENST00000465457 C16orf90A8MZG2 172 aa9.55□□□□□ -0.88
HDAC6-215ENST00000465457 Q6ZR54 194 aa9.55□□□□□ -0.88
HDAC6-215ENST00000465457 FAM19A3Q7Z5A8 133 aa9.55□□□□□ -0.88
HDAC6-215ENST00000465457 FAM104AQ969W3 186 aa9.55□□□□□ -0.88
HDAC6-215ENST00000465457 PLEKHB2Q96CS7 222 aa9.55□□□□□ -0.88
HDAC6-215ENST00000465457 TRAV8-6A0A0B4J262 113 aa9.54□□□□□ -0.88
HDAC6-215ENST00000465457 A0A0J9YXV3 536 aa9.54□□□□□ -0.88
HDAC6-215ENST00000465457 TMEM223A0PJW6 202 aa9.54□□□□□ -0.88
HDAC6-215ENST00000465457 H3BRM9 83 aa9.54□□□□□ -0.88
HDAC6-215ENST00000465457 ZNF22P17026 224 aaPredicted RBP9.54□□□□□ -0.88
HDAC6-215ENST00000465457 UBE2D1P51668 147 aa9.54□□□□□ -0.88
HDAC6-215ENST00000465457 TIRAPP58753 221 aa9.54□□□□□ -0.88
HDAC6-215ENST00000465457 BATFQ16520 125 aa9.54□□□□□ -0.88
HDAC6-215ENST00000465457 TAL2Q16559 108 aa9.54□□□□□ -0.88
HDAC6-215ENST00000465457 GEMIN7Q9H840 131 aaKnown RBP9.54□□□□□ -0.88
HDAC6-215ENST00000465457 CELA1Q9UNI1 258 aa9.54□□□□□ -0.88
HDAC6-215ENST00000465457 MYCBP2O75592 4640 aa9.53□□□□□ -0.88
HDAC6-215ENST00000465457 TRAV10A0A0B4J240 114 aa9.53□□□□□ -0.88
HDAC6-215ENST00000465457 HERVK_113P63121 156 aa9.53□□□□□ -0.88
HDAC6-215ENST00000465457 MPV17L2Q567V2 206 aa9.53□□□□□ -0.88
HDAC6-215ENST00000465457 CDC42SE2Q9NRR3 84 aa9.53□□□□□ -0.88
HDAC6-215ENST00000465457 FAT1Q14517 4588 aa9.52□□□□□ -0.88
HDAC6-215ENST00000465457 IGLV5-45A0A087WSX0 123 aa9.52□□□□□ -0.89
HDAC6-215ENST00000465457 F5H768 121 aa9.52□□□□□ -0.89
HDAC6-215ENST00000465457 H3BNG1 76 aa9.52□□□□□ -0.89
HDAC6-215ENST00000465457 LEPROTO15243 131 aa9.52□□□□□ -0.89
HDAC6-215ENST00000465457 LGALS3P17931 250 aaKnown RBP9.52□□□□□ -0.89
HDAC6-215ENST00000465457 HINT1P49773 126 aaPredicted RBP9.52□□□□□ -0.89
HDAC6-215ENST00000465457 TNP2Q05952 138 aa9.52□□□□□ -0.89
HDAC6-215ENST00000465457 MRPL23Q16540 153 aaKnown RBP9.52□□□□□ -0.89
HDAC6-215ENST00000465457 BVES-AS1Q5T3Y7 98 aa9.52□□□□□ -0.89
HDAC6-215ENST00000465457 CHCHD5Q9BSY4 110 aa9.52□□□□□ -0.89
HDAC6-215ENST00000465457 TP73-AS1Q9UF72 201 aa9.52□□□□□ -0.89
HDAC6-215ENST00000465457 ZNF815PA8K554 130 aa9.51□□□□□ -0.89
HDAC6-215ENST00000465457 ICOSQ9Y6W8 199 aa9.51□□□□□ -0.89
HDAC6-215ENST00000465457 A6NDN8 102 aa9.5□□□□□ -0.89
HDAC6-215ENST00000465457 J3QQQ9 107 aa9.5□□□□□ -0.89
HDAC6-215ENST00000465457 LINC00469Q8N7U9 141 aa9.5□□□□□ -0.89
HDAC6-215ENST00000465457 VSIG2Q96IQ7 327 aa9.5□□□□□ -0.89
HDAC6-215ENST00000465457 DEFB131BA0A096LNP1 70 aa9.49□□□□□ -0.89
HDAC6-215ENST00000465457 A0A1B0GUV1 79 aa9.49□□□□□ -0.89
HDAC6-215ENST00000465457 C12orf74Q32Q52 190 aa9.49□□□□□ -0.89
HDAC6-215ENST00000465457 IGHV1-58A0A0C4DH39 117 aa9.48□□□□□ -0.89
HDAC6-215ENST00000465457 CCL25O15444 150 aa9.48□□□□□ -0.89
HDAC6-215ENST00000465457 RNASE13Q5GAN3 156 aaKnown RBP9.48□□□□□ -0.89
HDAC6-215ENST00000465457 SCGB1D4Q6XE38 83 aa9.48□□□□□ -0.89
HDAC6-215ENST00000465457 ORAOV1Q8WV07 137 aa9.48□□□□□ -0.89
HDAC6-215ENST00000465457 FLG2Q5D862 2391 aaPredicted RBP9.48□□□□□ -0.89
HDAC6-215ENST00000465457 A0A0J9YY99 117 aa9.47□□□□□ -0.89
HDAC6-215ENST00000465457 GAGE6Q13070 117 aa9.47□□□□□ -0.89
HDAC6-215ENST00000465457 LINC00242Q5T6M2 205 aa9.47□□□□□ -0.89
HDAC6-215ENST00000465457 C1orf134Q5TEV5 83 aa9.47□□□□□ -0.89
HDAC6-215ENST00000465457 TTTY13Q9BZ97 58 aa9.47□□□□□ -0.89
HDAC6-215ENST00000465457 IGHV3-30-3P0DP02 117 aa9.46□□□□□ -0.9
HDAC6-215ENST00000465457 HTN3P15516 51 aa9.46□□□□□ -0.9
HDAC6-215ENST00000465457 UBE2DNLQ8IWF7 75 aa9.46□□□□□ -0.9
HDAC6-215ENST00000465457 TM2D2Q9BX73 214 aa9.46□□□□□ -0.9
HDAC6-215ENST00000465457 LELP1Q5T871 98 aa9.45□□□□□ -0.9
HDAC6-215ENST00000465457 HIST1H4GQ99525 98 aa9.45□□□□□ -0.9
HDAC6-215ENST00000465457 SPANXB1Q9NS25 103 aaPredicted RBP9.45□□□□□ -0.9
HDAC6-215ENST00000465457 TRAV13-1A0A0B4J241 112 aa9.44□□□□□ -0.9
HDAC6-215ENST00000465457 CEND1Q8N111 149 aa9.44□□□□□ -0.9
HDAC6-215ENST00000465457 CDKN2A-AS1Q9UH64 79 aa9.44□□□□□ -0.9
HDAC6-215ENST00000465457 A0A1B0GV90 55 aa9.43□□□□□ -0.9
HDAC6-215ENST00000465457 TMEM238LA0A1B0GVL6 79 aa9.43□□□□□ -0.9
HDAC6-215ENST00000465457 A6NJY4 79 aa9.43□□□□□ -0.9
HDAC6-215ENST00000465457 TMEM238C9JI98 176 aa9.43□□□□□ -0.9
HDAC6-215ENST00000465457 GCSHP23434 173 aa9.43□□□□□ -0.9
HDAC6-215ENST00000465457 TSPEAR-AS2P59090 65 aa9.43□□□□□ -0.9
HDAC6-215ENST00000465457 RBX1P62877 108 aa9.43□□□□□ -0.9
HDAC6-215ENST00000465457 A0A096LPF7 62 aa9.42□□□□□ -0.9
HDAC6-215ENST00000465457 IGLV5-39A0A0G2JS06 123 aa9.42□□□□□ -0.9
HDAC6-215ENST00000465457 TMEM262E9PQX1 116 aa9.42□□□□□ -0.9
HDAC6-215ENST00000465457 IGLV4-60A0A075B6I1 120 aa9.41□□□□□ -0.9
HDAC6-215ENST00000465457 SPINK8P0C7L1 97 aa9.41□□□□□ -0.9
HDAC6-215ENST00000465457 PTTG1IPP53801 180 aa9.41□□□□□ -0.9
HDAC6-215ENST00000465457 SS18Q15532 418 aa9.41□□□□□ -0.9
HDAC6-215ENST00000465457 IGHV3-64A0A075B6Q5 118 aa9.4□□□□□ -0.9
HDAC6-215ENST00000465457 SMIM1B2RUZ4 78 aa9.4□□□□□ -0.9
HDAC6-215ENST00000465457 NDUFA1O15239 70 aa9.4□□□□□ -0.9
HDAC6-215ENST00000465457 SRSF9Q13242 221 aaKnown RBP eCLIP9.4□□□□□ -0.9
HDAC6-215ENST00000465457 SFTA2Q6UW10 78 aa9.4□□□□□ -0.9
HDAC6-215ENST00000465457 Q6ZVH6 145 aa9.4□□□□□ -0.9
HDAC6-215ENST00000465457 LINC01561Q8N1V8 128 aa9.4□□□□□ -0.9
HDAC6-215ENST00000465457 NDUFA12Q9UI09 145 aa9.4□□□□□ -0.9
HDAC6-215ENST00000465457 COX11Q9Y6N1 276 aa9.4□□□□□ -0.9
HDAC6-215ENST00000465457 TRAV8-3A0A0A6YYJ7 113 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms