RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 Q96MF0 132 aa2.48□□□□□ -2.01
COL8A1-204ENST00000462604 C14orf132Q9NPU4 83 aa2.48□□□□□ -2.01
COL8A1-204ENST00000462604 ORMDL1Q9P0S3 153 aa2.48□□□□□ -2.01
COL8A1-204ENST00000462604 C22orf24Q9Y442 160 aa2.48□□□□□ -2.01
COL8A1-204ENST00000462604 DMXL1Q9Y485 3027 aa2.47□□□□□ -2.01
COL8A1-204ENST00000462604 PTPRZ1P23471 2315 aaPredicted RBP2.47□□□□□ -2.01
COL8A1-204ENST00000462604 IGLV4-60A0A075B6I1 120 aa2.47□□□□□ -2.01
COL8A1-204ENST00000462604 PLAC8L1A1L4L8 177 aa2.47□□□□□ -2.01
COL8A1-204ENST00000462604 J3KT08 172 aa2.47□□□□□ -2.01
COL8A1-204ENST00000462604 LY6G6DO95868 133 aa2.47□□□□□ -2.01
COL8A1-204ENST00000462604 PFN2P35080 140 aa2.47□□□□□ -2.01
COL8A1-204ENST00000462604 HIST1H4AP62805 103 aaKnown RBP2.47□□□□□ -2.01
COL8A1-204ENST00000462604 FHL2Q14192 279 aa2.47□□□□□ -2.01
COL8A1-204ENST00000462604 SERTAD4-AS1Q5TG53 156 aa2.47□□□□□ -2.01
COL8A1-204ENST00000462604 Q8IZM0 81 aa2.47□□□□□ -2.01
COL8A1-204ENST00000462604 C3orf56Q8N813 242 aa2.47□□□□□ -2.01
COL8A1-204ENST00000462604 OBSCN-AS1Q96MR7 158 aa2.47□□□□□ -2.01
COL8A1-204ENST00000462604 KLK5Q9Y337 293 aaPredicted RBP2.47□□□□□ -2.01
COL8A1-204ENST00000462604 ACACAQ13085 2346 aa2.47□□□□□ -2.01
COL8A1-204ENST00000462604 MUC6Q6W4X9 2439 aa2.47□□□□□ -2.01
COL8A1-204ENST00000462604 PTPRQQ9UMZ3 2332 aa2.46□□□□□ -2.02
COL8A1-204ENST00000462604 HRNRQ86YZ3 2850 aaPredicted RBP2.46□□□□□ -2.02
COL8A1-204ENST00000462604 IGHV3OR16-9A0A0B4J2B5 98 aa2.46□□□□□ -2.02
COL8A1-204ENST00000462604 LINC00959A0A1B0GUT2 108 aa2.46□□□□□ -2.02
COL8A1-204ENST00000462604 JMJD7-PLA2G4BH0Y9G9 81 aa2.46□□□□□ -2.02
COL8A1-204ENST00000462604 NCR3O14931 201 aa2.46□□□□□ -2.02
COL8A1-204ENST00000462604 NDUFC2O95298 119 aa2.46□□□□□ -2.02
COL8A1-204ENST00000462604 CCKP06307 115 aa2.46□□□□□ -2.02
COL8A1-204ENST00000462604 GIG44P09565 113 aaPredicted RBP2.46□□□□□ -2.02
COL8A1-204ENST00000462604 CRYGAP11844 174 aa2.46□□□□□ -2.02
COL8A1-204ENST00000462604 GYPEP15421 78 aa2.46□□□□□ -2.02
COL8A1-204ENST00000462604 XCL1P47992 114 aa2.46□□□□□ -2.02
COL8A1-204ENST00000462604 SERP2Q8N6R1 65 aa2.46□□□□□ -2.02
COL8A1-204ENST00000462604 LINC00167Q96N53 147 aa2.46□□□□□ -2.02
COL8A1-204ENST00000462604 C11orf68Q9H3H3 251 aaKnown RBP2.46□□□□□ -2.02
COL8A1-204ENST00000462604 LINC00846Q9NV44 126 aa2.46□□□□□ -2.02
COL8A1-204ENST00000462604 ARHGAP32A7KAX9 2087 aa2.46□□□□□ -2.02
COL8A1-204ENST00000462604 DMXL2Q8TDJ6 3036 aa2.46□□□□□ -2.02
COL8A1-204ENST00000462604 ATMQ13315 3056 aa2.45□□□□□ -2.02
COL8A1-204ENST00000462604 MUC4Q99102 2169 aa2.45□□□□□ -2.02
COL8A1-204ENST00000462604 IGKV3D-7A0A0C4DH55 119 aa2.45□□□□□ -2.02
COL8A1-204ENST00000462604 A0A1B0GUV1 79 aa2.45□□□□□ -2.02
COL8A1-204ENST00000462604 H3BQ85 93 aa2.45□□□□□ -2.02
COL8A1-204ENST00000462604 TMEM256-PLSCR3K7ERE1 68 aa2.45□□□□□ -2.02
COL8A1-204ENST00000462604 IGLV1-51P01701 117 aa2.45□□□□□ -2.02
COL8A1-204ENST00000462604 SLPIP03973 132 aa2.45□□□□□ -2.02
COL8A1-204ENST00000462604 DEFB130BP0DP73 79 aa2.45□□□□□ -2.02
COL8A1-204ENST00000462604 DEFB130AP0DP74 79 aa2.45□□□□□ -2.02
COL8A1-204ENST00000462604 TMEM258P61165 79 aa2.45□□□□□ -2.02
COL8A1-204ENST00000462604 COX17Q14061 63 aa2.45□□□□□ -2.02
COL8A1-204ENST00000462604 LCE2DQ5TA82 110 aaPredicted RBP2.45□□□□□ -2.02
COL8A1-204ENST00000462604 KIR2DL5BQ8NHK3 375 aa2.45□□□□□ -2.02
COL8A1-204ENST00000462604 C2orf48Q96LS8 159 aa2.45□□□□□ -2.02
COL8A1-204ENST00000462604 WFDC10AQ9H1F0 79 aa2.45□□□□□ -2.02
COL8A1-204ENST00000462604 C16orf95Q9H693 158 aa2.45□□□□□ -2.02
COL8A1-204ENST00000462604 ABCA4P78363 2273 aa2.44□□□□□ -2.02
COL8A1-204ENST00000462604 IGF2RP11717 2491 aa2.44□□□□□ -2.02
COL8A1-204ENST00000462604 RIF1Q5UIP0 2472 aaKnown RBP2.44□□□□□ -2.02
COL8A1-204ENST00000462604 hADV29S1A0JD25 119 aa2.44□□□□□ -2.02
COL8A1-204ENST00000462604 SMIM9A6NGZ8 99 aa2.44□□□□□ -2.02
COL8A1-204ENST00000462604 LYRM9A8MSI8 78 aa2.44□□□□□ -2.02
COL8A1-204ENST00000462604 H3BS24 57 aa2.44□□□□□ -2.02
COL8A1-204ENST00000462604 RNASE1P07998 156 aaKnown RBP2.44□□□□□ -2.02
COL8A1-204ENST00000462604 KRTAP10-9P60411 292 aa2.44□□□□□ -2.02
COL8A1-204ENST00000462604 C9orf129Q5T035 196 aaKnown RBP2.44□□□□□ -2.02
COL8A1-204ENST00000462604 CLPSL2Q6UWE3 100 aa2.44□□□□□ -2.02
COL8A1-204ENST00000462604 CD164L2Q6UWJ8 174 aa2.44□□□□□ -2.02
COL8A1-204ENST00000462604 LINC00612Q8N6U2 182 aa2.44□□□□□ -2.02
COL8A1-204ENST00000462604 Q8N814 137 aa2.44□□□□□ -2.02
COL8A1-204ENST00000462604 CSNK1G2-AS1Q8NCQ2 148 aa2.44□□□□□ -2.02
COL8A1-204ENST00000462604 MUC7Q8TAX7 377 aa2.44□□□□□ -2.02
COL8A1-204ENST00000462604 UBL5Q9BZL1 73 aa2.44□□□□□ -2.02
COL8A1-204ENST00000462604 ESM1Q9NQ30 184 aa2.44□□□□□ -2.02
COL8A1-204ENST00000462604 C19orf73Q9NVV2 129 aa2.44□□□□□ -2.02
COL8A1-204ENST00000462604 PRO0255Q9UI72 69 aa2.44□□□□□ -2.02
COL8A1-204ENST00000462604 WNK2Q9Y3S1 2297 aa2.44□□□□□ -2.02
COL8A1-204ENST00000462604 A0A087WVE0 104 aa2.43□□□□□ -2.02
COL8A1-204ENST00000462604 TRBV10-3A0A0K0K1G6 114 aa2.43□□□□□ -2.02
COL8A1-204ENST00000462604 NDUFC2-KCTD14E9PQ53 114 aa2.43□□□□□ -2.02
COL8A1-204ENST00000462604 RPS28P62857 69 aaKnown RBP2.43□□□□□ -2.02
COL8A1-204ENST00000462604 SPAG11BQ08648 103 aa2.43□□□□□ -2.02
COL8A1-204ENST00000462604 KRTAP1-3Q8IUG1 177 aa2.43□□□□□ -2.02
COL8A1-204ENST00000462604 LINC01006Q8NI28 216 aa2.43□□□□□ -2.02
COL8A1-204ENST00000462604 CHCHD10Q8WYQ3 142 aaPredicted RBP2.43□□□□□ -2.02
COL8A1-204ENST00000462604 CACNA1BQ00975 2339 aa2.43□□□□□ -2.02
COL8A1-204ENST00000462604 DCHS1Q96JQ0 3298 aa2.43□□□□□ -2.02
COL8A1-204ENST00000462604 AGRNO00468 2067 aa2.43□□□□□ -2.02
COL8A1-204ENST00000462604 LRBAP50851 2863 aa2.43□□□□□ -2.02
COL8A1-204ENST00000462604 SVEP1Q4LDE5 3571 aa2.43□□□□□ -2.02
COL8A1-204ENST00000462604 PCNX1Q96RV3 2341 aa2.42□□□□□ -2.02
COL8A1-204ENST00000462604 DCHS2Q6V1P9 2916 aa2.42□□□□□ -2.02
COL8A1-204ENST00000462604 CSMD1Q96PZ7 3565 aa2.42□□□□□ -2.02
COL8A1-204ENST00000462604 LOC110117498A0A087WWA1 95 aa2.42□□□□□ -2.02
COL8A1-204ENST00000462604 IGHV4-28A0A0C4DH34 117 aa2.42□□□□□ -2.02
COL8A1-204ENST00000462604 BCE1O60756 84 aa2.42□□□□□ -2.02
COL8A1-204ENST00000462604 ANGP03950 147 aaKnown RBP2.42□□□□□ -2.02
COL8A1-204ENST00000462604 PRB1P04280 392 aa2.42□□□□□ -2.02
COL8A1-204ENST00000462604 PLA2G2AP14555 144 aa2.42□□□□□ -2.02
COL8A1-204ENST00000462604 PDE6GP18545 87 aa2.42□□□□□ -2.02
COL8A1-204ENST00000462604 NANOS2P60321 138 aaKnown RBP2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms