RNA–Protein interactions for RNA: ENST00000461889.1

TRAPPC10-205, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-205ENST00000461889 PVALBP20472 110 aaPredicted RBP3.35□□□□□ -1.87
TRAPPC10-205ENST00000461889 SSTP61278 116 aa3.35□□□□□ -1.87
TRAPPC10-205ENST00000461889 C6orf99Q4VX62 202 aa3.35□□□□□ -1.87
TRAPPC10-205ENST00000461889 KRTAP5-10Q6L8G5 202 aa3.35□□□□□ -1.87
TRAPPC10-205ENST00000461889 MCFD2Q8NI22 146 aa3.35□□□□□ -1.87
TRAPPC10-205ENST00000461889 MRAP2Q96G30 205 aa3.35□□□□□ -1.87
TRAPPC10-205ENST00000461889 LSM5Q9Y4Y9 91 aaKnown RBP3.35□□□□□ -1.87
TRAPPC10-205ENST00000461889 AHNAK2Q8IVF2 5795 aa3.35□□□□□ -1.87
TRAPPC10-205ENST00000461889 GAGE10A6NGK3 116 aa3.34□□□□□ -1.87
TRAPPC10-205ENST00000461889 AQP4P55087 323 aa3.34□□□□□ -1.87
TRAPPC10-205ENST00000461889 DEFA3P59666 94 aa3.34□□□□□ -1.87
TRAPPC10-205ENST00000461889 LINC00483Q53H64 154 aa3.34□□□□□ -1.87
TRAPPC10-205ENST00000461889 LCE1EQ5T753 118 aa3.34□□□□□ -1.87
TRAPPC10-205ENST00000461889 C2orf82Q6UX34 121 aa3.34□□□□□ -1.87
TRAPPC10-205ENST00000461889 TMEM126AQ9H061 195 aa3.34□□□□□ -1.87
TRAPPC10-205ENST00000461889 A0A1W2PPV4 95 aa3.33□□□□□ -1.88
TRAPPC10-205ENST00000461889 ARL14EPLP0DKL9 152 aa3.33□□□□□ -1.88
TRAPPC10-205ENST00000461889 FAUP35544 74 aaKnown RBP3.33□□□□□ -1.88
TRAPPC10-205ENST00000461889 LSM3P62310 102 aaKnown RBP3.33□□□□□ -1.88
TRAPPC10-205ENST00000461889 KRTAP5-7Q6L8G8 165 aa3.33□□□□□ -1.88
TRAPPC10-205ENST00000461889 HIGD2AQ9BW72 106 aa3.33□□□□□ -1.88
TRAPPC10-205ENST00000461889 TRBV20-1A0A075B6N2 111 aa3.32□□□□□ -1.88
TRAPPC10-205ENST00000461889 I3L3M4 83 aa3.32□□□□□ -1.88
TRAPPC10-205ENST00000461889 NHLH2Q02577 135 aa3.32□□□□□ -1.88
TRAPPC10-205ENST00000461889 MOBPQ13875 183 aa3.32□□□□□ -1.88
TRAPPC10-205ENST00000461889 GATD1Q8NB37 220 aa3.32□□□□□ -1.88
TRAPPC10-205ENST00000461889 IGKV2-28A0A075B6P5 120 aa3.31□□□□□ -1.88
TRAPPC10-205ENST00000461889 A0A1W2PRE2 83 aa3.31□□□□□ -1.88
TRAPPC10-205ENST00000461889 SDHAF1A6NFY7 115 aa3.31□□□□□ -1.88
TRAPPC10-205ENST00000461889 M0R378 163 aa3.31□□□□□ -1.88
TRAPPC10-205ENST00000461889 PEX7O00628 323 aa3.31□□□□□ -1.88
TRAPPC10-205ENST00000461889 LTAP01374 205 aa3.31□□□□□ -1.88
TRAPPC10-205ENST00000461889 IGKV2D-28P01615 120 aa3.31□□□□□ -1.88
TRAPPC10-205ENST00000461889 STAG3L2P0CL84 134 aa3.31□□□□□ -1.88
TRAPPC10-205ENST00000461889 STAG3L3P0CL85 134 aa3.31□□□□□ -1.88
TRAPPC10-205ENST00000461889 Q8N9P0 234 aaPredicted RBP3.31□□□□□ -1.88
TRAPPC10-205ENST00000461889 HIST1H2BAQ96A08 127 aa3.31□□□□□ -1.88
TRAPPC10-205ENST00000461889 TMEM242Q9NWH2 141 aa3.31□□□□□ -1.88
TRAPPC10-205ENST00000461889 HMGB3O15347 200 aaKnown RBP3.3□□□□□ -1.88
TRAPPC10-205ENST00000461889 TRGC1P0CF51 173 aa3.3□□□□□ -1.88
TRAPPC10-205ENST00000461889 PMCHP20382 165 aa3.3□□□□□ -1.88
TRAPPC10-205ENST00000461889 GCHFRP30047 84 aa3.3□□□□□ -1.88
TRAPPC10-205ENST00000461889 RNASE13Q5GAN3 156 aaKnown RBP3.3□□□□□ -1.88
TRAPPC10-205ENST00000461889 FMC1Q96HJ9 113 aa3.3□□□□□ -1.88
TRAPPC10-205ENST00000461889 CNBD2Q96M20 576 aa3.3□□□□□ -1.88
TRAPPC10-205ENST00000461889 LIMD2Q9BT23 127 aa3.3□□□□□ -1.88
TRAPPC10-205ENST00000461889 TMEM167BQ9NRX6 74 aa3.3□□□□□ -1.88
TRAPPC10-205ENST00000461889 C7orf77A4D0Y5 90 aa3.29□□□□□ -1.88
TRAPPC10-205ENST00000461889 RAB19A4D1S5 217 aa3.29□□□□□ -1.88
TRAPPC10-205ENST00000461889 TMEM238C9JI98 176 aa3.29□□□□□ -1.88
TRAPPC10-205ENST00000461889 IGLC6P0CF74 106 aa3.29□□□□□ -1.88
TRAPPC10-205ENST00000461889 KRTAP10-5P60370 271 aa3.29□□□□□ -1.88
TRAPPC10-205ENST00000461889 SMAGPQ0VAQ4 97 aa3.29□□□□□ -1.88
TRAPPC10-205ENST00000461889 ATP11AUNQ6ZP68 121 aa3.29□□□□□ -1.88
TRAPPC10-205ENST00000461889 FAM19A3Q7Z5A8 133 aa3.29□□□□□ -1.88
TRAPPC10-205ENST00000461889 NKAPP1Q8N9T2 125 aa3.29□□□□□ -1.88
TRAPPC10-205ENST00000461889 RPL39LQ96EH5 51 aaKnown RBP3.29□□□□□ -1.88
TRAPPC10-205ENST00000461889 CHTOPQ9Y3Y2 248 aaKnown RBP3.29□□□□□ -1.88
TRAPPC10-205ENST00000461889 IGLV9-49A0A0B4J1Y8 123 aa3.28□□□□□ -1.88
TRAPPC10-205ENST00000461889 NOL3O60936 208 aaKnown RBP3.28□□□□□ -1.88
TRAPPC10-205ENST00000461889 NPSP0C0P6 89 aa3.28□□□□□ -1.88
TRAPPC10-205ENST00000461889 UBE2G1P62253 170 aa3.28□□□□□ -1.88
TRAPPC10-205ENST00000461889 IL15RAQ13261 267 aa3.28□□□□□ -1.88
TRAPPC10-205ENST00000461889 RAB32Q13637 225 aa3.28□□□□□ -1.88
TRAPPC10-205ENST00000461889 DEDD2Q8WXF8 326 aa3.28□□□□□ -1.88
TRAPPC10-205ENST00000461889 RAB24Q969Q5 203 aa3.28□□□□□ -1.88
TRAPPC10-205ENST00000461889 TRBV6-5A0A0K0K1A5 114 aa3.27□□□□□ -1.89
TRAPPC10-205ENST00000461889 IFNA1P01562 189 aa3.27□□□□□ -1.89
TRAPPC10-205ENST00000461889 VBP1P61758 197 aa3.27□□□□□ -1.89
TRAPPC10-205ENST00000461889 NEDD8Q15843 81 aa3.27□□□□□ -1.89
TRAPPC10-205ENST00000461889 NKX6-2Q9C056 277 aaPredicted RBP3.27□□□□□ -1.89
TRAPPC10-205ENST00000461889 HMCN1Q96RW7 5635 aa3.26□□□□□ -1.89
TRAPPC10-205ENST00000461889 FAM25EA8MYX2 175 aa3.26□□□□□ -1.89
TRAPPC10-205ENST00000461889 NDUFB6O95139 128 aa3.26□□□□□ -1.89
TRAPPC10-205ENST00000461889 CDC34P49427 236 aaPredicted RBP3.26□□□□□ -1.89
TRAPPC10-205ENST00000461889 AP3S2P59780 193 aa3.26□□□□□ -1.89
TRAPPC10-205ENST00000461889 KRTAP15-1Q3LI76 137 aa3.26□□□□□ -1.89
TRAPPC10-205ENST00000461889 TEX261Q6UWH6 196 aa3.26□□□□□ -1.89
TRAPPC10-205ENST00000461889 Q6ZUT4 128 aa3.26□□□□□ -1.89
TRAPPC10-205ENST00000461889 Q6ZVH6 145 aa3.26□□□□□ -1.89
TRAPPC10-205ENST00000461889 TIMM21Q9BVV7 248 aa3.26□□□□□ -1.89
TRAPPC10-205ENST00000461889 RNASE7Q9H1E1 156 aaKnown RBP3.26□□□□□ -1.89
TRAPPC10-205ENST00000461889 RAB26Q9ULW5 256 aa3.26□□□□□ -1.89
TRAPPC10-205ENST00000461889 TGIF2-C20orf24A0A0A6YYL0 155 aa3.25□□□□□ -1.89
TRAPPC10-205ENST00000461889 F2Z2F3 143 aa3.25□□□□□ -1.89
TRAPPC10-205ENST00000461889 SCO1O75880 301 aa3.25□□□□□ -1.89
TRAPPC10-205ENST00000461889 CXorf1O96002 111 aa3.25□□□□□ -1.89
TRAPPC10-205ENST00000461889 KIAA1644Q3SXP7 199 aa3.25□□□□□ -1.89
TRAPPC10-205ENST00000461889 LINC01561Q8N1V8 128 aa3.25□□□□□ -1.89
TRAPPC10-205ENST00000461889 NRACQ8N912 160 aa3.25□□□□□ -1.89
TRAPPC10-205ENST00000461889 ALKBH7Q9BT30 221 aaPredicted RBP3.25□□□□□ -1.89
TRAPPC10-205ENST00000461889 FXYD6-FXYD2A0A087WZ82 144 aa3.24□□□□□ -1.89
TRAPPC10-205ENST00000461889 TRBV27A0A0K0K1C4 114 aa3.24□□□□□ -1.89
TRAPPC10-205ENST00000461889 FAM236DA0A1B0GTK5 79 aa3.24□□□□□ -1.89
TRAPPC10-205ENST00000461889 A8MWP4 228 aa3.24□□□□□ -1.89
TRAPPC10-205ENST00000461889 RGS5O15539 181 aa3.24□□□□□ -1.89
TRAPPC10-205ENST00000461889 SCGB1D1O95968 90 aa3.24□□□□□ -1.89
TRAPPC10-205ENST00000461889 FAM236CP0DP71 79 aa3.24□□□□□ -1.89
TRAPPC10-205ENST00000461889 TAGLN2P37802 199 aaKnown RBP3.24□□□□□ -1.89
TRAPPC10-205ENST00000461889 POLR2KP53803 58 aaKnown RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms