RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 CRYM-AS1A6NIL9 109 aa0.19□□□□□ -2.38
VCL-203ENST00000461383 H3BQ15 152 aa0.19□□□□□ -2.38
VCL-203ENST00000461383 FAM223AQ8IWN6 122 aa0.19□□□□□ -2.38
VCL-203ENST00000461383 FDCSPQ8NFU4 85 aa0.19□□□□□ -2.38
VCL-203ENST00000461383 TMEM263Q8WUH6 116 aaKnown RBP0.19□□□□□ -2.38
VCL-203ENST00000461383 C12orf57Q99622 126 aa0.19□□□□□ -2.38
VCL-203ENST00000461383 LAMC1P11047 1609 aa0.19□□□□□ -2.38
VCL-203ENST00000461383 ABCA3Q99758 1704 aa0.18□□□□□ -2.38
VCL-203ENST00000461383 ARHGAP5Q13017 1502 aa0.18□□□□□ -2.38
VCL-203ENST00000461383 C10orf142B7Z368 130 aa0.18□□□□□ -2.38
VCL-203ENST00000461383 HSD52Q0P140 79 aa0.18□□□□□ -2.38
VCL-203ENST00000461383 HIVEP3Q5T1R4 2406 aa0.18□□□□□ -2.38
VCL-203ENST00000461383 ABCA2Q9BZC7 2435 aa0.18□□□□□ -2.38
VCL-203ENST00000461383 ARHGEF5Q12774 1597 aa0.18□□□□□ -2.38
VCL-203ENST00000461383 PPRC1Q5VV67 1664 aaKnown RBP0.18□□□□□ -2.38
VCL-203ENST00000461383 TSC2P49815 1807 aa0.17□□□□□ -2.38
VCL-203ENST00000461383 POLA1P09884 1462 aaPredicted RBP0.17□□□□□ -2.38
VCL-203ENST00000461383 TOP2BQ02880 1626 aa0.17□□□□□ -2.38
VCL-203ENST00000461383 PAPPAQ13219 1627 aa0.17□□□□□ -2.38
VCL-203ENST00000461383 CC2D2AQ9P2K1 1620 aa0.17□□□□□ -2.38
VCL-203ENST00000461383 A0A1B0GWA3 101 aa0.17□□□□□ -2.38
VCL-203ENST00000461383 S100PP25815 95 aa0.17□□□□□ -2.38
VCL-203ENST00000461383 SPHKAPQ2M3C7 1700 aa0.17□□□□□ -2.38
VCL-203ENST00000461383 ARHGEF12Q9NZN5 1544 aa0.17□□□□□ -2.38
VCL-203ENST00000461383 NCOA3Q9Y6Q9 1424 aa0.16□□□□□ -2.38
VCL-203ENST00000461383 TMEM262E9PQX1 116 aa0.16□□□□□ -2.38
VCL-203ENST00000461383 UBE2D3P61077 147 aa0.16□□□□□ -2.38
VCL-203ENST00000461383 UBE2D2P62837 147 aa0.16□□□□□ -2.38
VCL-203ENST00000461383 Q5VSD8 79 aa0.16□□□□□ -2.38
VCL-203ENST00000461383 TCEAL7Q9BRU2 100 aa0.16□□□□□ -2.38
VCL-203ENST00000461383 PRO1933Q9H354 126 aa0.16□□□□□ -2.38
VCL-203ENST00000461383 HMGXB3Q12766 1538 aa0.16□□□□□ -2.38
VCL-203ENST00000461383 EHBP1L1Q8N3D4 1523 aa0.16□□□□□ -2.38
VCL-203ENST00000461383 GPR98Q8WXG9 6306 aa0.15□□□□□ -2.38
VCL-203ENST00000461383 I3L2K1 104 aa0.15□□□□□ -2.39
VCL-203ENST00000461383 C10orf113Q5VZT2 155 aa0.15□□□□□ -2.39
VCL-203ENST00000461383 PEG3Q9GZU2 1588 aa0.15□□□□□ -2.39
VCL-203ENST00000461383 SCN7AQ01118 1682 aa0.14□□□□□ -2.39
VCL-203ENST00000461383 CELSR1Q9NYQ6 3014 aa0.14□□□□□ -2.39
VCL-203ENST00000461383 CHD1O14646 1710 aa0.14□□□□□ -2.39
VCL-203ENST00000461383 SPRR1AP35321 89 aa0.14□□□□□ -2.39
VCL-203ENST00000461383 SEC11AP67812 179 aa0.14□□□□□ -2.39
VCL-203ENST00000461383 SPRR4Q96PI1 79 aa0.14□□□□□ -2.39
VCL-203ENST00000461383 NSD3Q9BZ95 1437 aa0.13□□□□□ -2.39
VCL-203ENST00000461383 NUP188Q5SRE5 1749 aa0.13□□□□□ -2.39
VCL-203ENST00000461383 FAM223BA6NKX1 122 aa0.13□□□□□ -2.39
VCL-203ENST00000461383 SAA2P0DJI9 122 aaPredicted RBP0.13□□□□□ -2.39
VCL-203ENST00000461383 VAMP8Q9BV40 100 aa0.13□□□□□ -2.39
VCL-203ENST00000461383 SPRR2GQ9BYE4 73 aa0.13□□□□□ -2.39
VCL-203ENST00000461383 DIP2CQ9Y2E4 1556 aa0.13□□□□□ -2.39
VCL-203ENST00000461383 TOPAZ1Q8N9V7 1692 aa0.13□□□□□ -2.39
VCL-203ENST00000461383 URB1O60287 2271 aaKnown RBP0.13□□□□□ -2.39
VCL-203ENST00000461383 PTPN13Q12923 2485 aa0.13□□□□□ -2.39
VCL-203ENST00000461383 CSMD3Q7Z407 3707 aa0.13□□□□□ -2.39
VCL-203ENST00000461383 CSPG4Q6UVK1 2322 aa0.13□□□□□ -2.39
VCL-203ENST00000461383 TRBV7-4A0A0J9YYF1 115 aa0.12□□□□□ -2.39
VCL-203ENST00000461383 hADV29S1A0JD25 119 aa0.12□□□□□ -2.39
VCL-203ENST00000461383 TMEM218A2RU14 115 aa0.12□□□□□ -2.39
VCL-203ENST00000461383 COX6B1P14854 86 aa0.12□□□□□ -2.39
VCL-203ENST00000461383 CGREF1Q99674 301 aa0.12□□□□□ -2.39
VCL-203ENST00000461383 COL7A1Q02388 2944 aa0.11□□□□□ -2.39
VCL-203ENST00000461383 MAGI1Q96QZ7 1491 aaPredicted RBP0.11□□□□□ -2.39
VCL-203ENST00000461383 GNGT2O14610 69 aa0.11□□□□□ -2.39
VCL-203ENST00000461383 LINC01600Q96MT4 127 aa0.11□□□□□ -2.39
VCL-203ENST00000461383 AP4S1Q9Y587 144 aa0.11□□□□□ -2.39
VCL-203ENST00000461383 ZFHX3Q15911 3703 aa0.11□□□□□ -2.39
VCL-203ENST00000461383 ANKRD36A6QL64 1941 aa0.11□□□□□ -2.39
VCL-203ENST00000461383 S100A10P60903 97 aa0.1□□□□□ -2.39
VCL-203ENST00000461383 ADGRL2O95490 1459 aa0.1□□□□□ -2.39
VCL-203ENST00000461383 GVINP1Q7Z2Y8 2422 aa0.09□□□□□ -2.39
VCL-203ENST00000461383 ZFYVE16Q7Z3T8 1539 aa0.09□□□□□ -2.39
VCL-203ENST00000461383 DNAJC13O75165 2243 aa0.09□□□□□ -2.39
VCL-203ENST00000461383 NDUFC1O43677 76 aa0.09□□□□□ -2.4
VCL-203ENST00000461383 C14orf144Q96I85 54 aa0.09□□□□□ -2.4
VCL-203ENST00000461383 C1orf167Q5SNV9 1468 aa0.09□□□□□ -2.4
VCL-203ENST00000461383 ABCC5O15440 1437 aa0.08□□□□□ -2.4
VCL-203ENST00000461383 TRAV30A0A087WSZ9 112 aa0.08□□□□□ -2.4
VCL-203ENST00000461383 ATP6V1G2-DDX39BF2Z307 99 aa0.08□□□□□ -2.4
VCL-203ENST00000461383 DEFB123Q8N688 67 aa0.08□□□□□ -2.4
VCL-203ENST00000461383 FXYD6Q9H0Q3 95 aa0.08□□□□□ -2.4
VCL-203ENST00000461383 GAPVD1Q14C86 1478 aa0.08□□□□□ -2.4
VCL-203ENST00000461383 SETBP1Q9Y6X0 1596 aa0.07□□□□□ -2.4
VCL-203ENST00000461383 A0A0G2JND7 137 aa0.07□□□□□ -2.4
VCL-203ENST00000461383 LINC00959A0A1B0GUT2 108 aa0.07□□□□□ -2.4
VCL-203ENST00000461383 C7orf77A4D0Y5 90 aa0.07□□□□□ -2.4
VCL-203ENST00000461383 SYS1-DBNDD2H3BUS1 97 aa0.07□□□□□ -2.4
VCL-203ENST00000461383 LCN9Q8WX39 176 aa0.07□□□□□ -2.4
VCL-203ENST00000461383 PMCHL2Q9BQD1 86 aa0.07□□□□□ -2.4
VCL-203ENST00000461383 LINC00846Q9NV44 126 aa0.07□□□□□ -2.4
VCL-203ENST00000461383 MRC2Q9UBG0 1479 aa0.07□□□□□ -2.4
VCL-203ENST00000461383 SYNE2Q8WXH0 6885 aaKnown RBP0.07□□□□□ -2.4
VCL-203ENST00000461383 A0A0G2JMZ2 1700 aa0.07□□□□□ -2.4
VCL-203ENST00000461383 XRN1Q8IZH2 1706 aaKnown RBP0.07□□□□□ -2.4
VCL-203ENST00000461383 HUWE1Q7Z6Z7 4374 aaKnown RBP0.06□□□□□ -2.4
VCL-203ENST00000461383 VWFP04275 2813 aa0.06□□□□□ -2.4
VCL-203ENST00000461383 A0A087WVE0 104 aa0.06□□□□□ -2.4
VCL-203ENST00000461383 SPRR1BP22528 89 aa0.06□□□□□ -2.4
VCL-203ENST00000461383 RBP2P50120 134 aa0.06□□□□□ -2.4
VCL-203ENST00000461383 PMCHL1Q16048 86 aa0.06□□□□□ -2.4
VCL-203ENST00000461383 PSMG4Q5JS54 123 aa0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms