RNA–Protein interactions for RNA: ENST00000461159.6

HDAC9-219, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-219ENST00000461159 MGPP08493 103 aa6.24□□□□□ -1.41
HDAC9-219ENST00000461159 RBM12B-AS1Q9P1G2 102 aa6.24□□□□□ -1.41
HDAC9-219ENST00000461159 PHLDA3Q9Y5J5 127 aa6.24□□□□□ -1.41
HDAC9-219ENST00000461159 MED14OSP0DP75 135 aa6.23□□□□□ -1.41
HDAC9-219ENST00000461159 RPL39LQ96EH5 51 aaKnown RBP6.23□□□□□ -1.41
HDAC9-219ENST00000461159 USMG5Q96IX5 58 aa6.23□□□□□ -1.41
HDAC9-219ENST00000461159 H7C423 109 aa6.23□□□□□ -1.41
HDAC9-219ENST00000461159 C14orf178Q8N769 122 aaPredicted RBP6.23□□□□□ -1.41
HDAC9-219ENST00000461159 IGHV3-33P01772 117 aa6.22□□□□□ -1.41
HDAC9-219ENST00000461159 LINC01006Q8NI28 216 aa6.22□□□□□ -1.41
HDAC9-219ENST00000461159 PKD1L1Q8TDX9 2849 aa6.22□□□□□ -1.41
HDAC9-219ENST00000461159 TRBV30A0A0K0K1B3 111 aa6.22□□□□□ -1.41
HDAC9-219ENST00000461159 ATP5EP56381 51 aaPredicted RBP6.22□□□□□ -1.41
HDAC9-219ENST00000461159 SS18Q15532 418 aa6.22□□□□□ -1.41
HDAC9-219ENST00000461159 PRR9Q5T870 116 aa6.22□□□□□ -1.41
HDAC9-219ENST00000461159 IGHV1-58A0A0C4DH39 117 aa6.21□□□□□ -1.41
HDAC9-219ENST00000461159 A0A0J9YY99 117 aa6.21□□□□□ -1.41
HDAC9-219ENST00000461159 TIMM17BO60830 172 aa6.21□□□□□ -1.41
HDAC9-219ENST00000461159 IGHV4OR15-8A0A075B7B6 117 aa6.21□□□□□ -1.42
HDAC9-219ENST00000461159 A0A087WW49 117 aa6.21□□□□□ -1.42
HDAC9-219ENST00000461159 C11orf86A6NJI1 115 aa6.21□□□□□ -1.42
HDAC9-219ENST00000461159 CD28P10747 220 aa6.21□□□□□ -1.42
HDAC9-219ENST00000461159 ZFAND2AQ8N6M9 145 aa6.21□□□□□ -1.42
HDAC9-219ENST00000461159 KLHL30-AS1Q8NEE0 82 aa6.21□□□□□ -1.42
HDAC9-219ENST00000461159 TMEM141Q96I45 108 aa6.21□□□□□ -1.42
HDAC9-219ENST00000461159 TM2D3Q9BRN9 247 aa6.21□□□□□ -1.42
HDAC9-219ENST00000461159 RNASE1P07998 156 aaKnown RBP6.2□□□□□ -1.42
HDAC9-219ENST00000461159 RPL11P62913 178 aaKnown RBP6.2□□□□□ -1.42
HDAC9-219ENST00000461159 USP17L23D6RBM5 183 aa6.2□□□□□ -1.42
HDAC9-219ENST00000461159 CCKP06307 115 aa6.2□□□□□ -1.42
HDAC9-219ENST00000461159 SLURP1P55000 103 aa6.2□□□□□ -1.42
HDAC9-219ENST00000461159 BEAN1Q3B7T3 259 aa6.2□□□□□ -1.42
HDAC9-219ENST00000461159 Q8N2B8 174 aa6.2□□□□□ -1.42
HDAC9-219ENST00000461159 IGLV4-69A0A075B6H9 119 aa6.19□□□□□ -1.42
HDAC9-219ENST00000461159 A0A087WWL8 130 aa6.19□□□□□ -1.42
HDAC9-219ENST00000461159 NDUFA4O00483 81 aa6.19□□□□□ -1.42
HDAC9-219ENST00000461159 IGHV3-30P01768 117 aa6.19□□□□□ -1.42
HDAC9-219ENST00000461159 IGHV3-30-5P0DP03 117 aa6.19□□□□□ -1.42
HDAC9-219ENST00000461159 DEFB1P60022 68 aa6.19□□□□□ -1.42
HDAC9-219ENST00000461159 SLC25A29Q8N8R3 303 aa6.19□□□□□ -1.42
HDAC9-219ENST00000461159 DAND5Q8N907 189 aa6.19□□□□□ -1.42
HDAC9-219ENST00000461159 H7BZZ5 65 aa6.19□□□□□ -1.42
HDAC9-219ENST00000461159 K7EMT4 169 aa6.19□□□□□ -1.42
HDAC9-219ENST00000461159 SPRY2O43597 315 aa6.19□□□□□ -1.42
HDAC9-219ENST00000461159 LGALS3P17931 250 aaKnown RBP6.19□□□□□ -1.42
HDAC9-219ENST00000461159 RNASE4P34096 147 aaKnown RBP6.19□□□□□ -1.42
HDAC9-219ENST00000461159 RHOHQ15669 191 aa6.19□□□□□ -1.42
HDAC9-219ENST00000461159 GPHB5Q86YW7 130 aa6.19□□□□□ -1.42
HDAC9-219ENST00000461159 TIMM17AQ99595 171 aa6.19□□□□□ -1.42
HDAC9-219ENST00000461159 IGIPA6NJ69 53 aa6.18□□□□□ -1.42
HDAC9-219ENST00000461159 VCYO14598 125 aa6.18□□□□□ -1.42
HDAC9-219ENST00000461159 DCANP1Q8TF63 244 aa6.18□□□□□ -1.42
HDAC9-219ENST00000461159 TMEM263Q8WUH6 116 aaKnown RBP6.18□□□□□ -1.42
HDAC9-219ENST00000461159 NXPH4O95158 308 aa6.17□□□□□ -1.42
HDAC9-219ENST00000461159 TSHBP01222 138 aa6.17□□□□□ -1.42
HDAC9-219ENST00000461159 XCL1P47992 114 aa6.17□□□□□ -1.42
HDAC9-219ENST00000461159 LYPD5Q6UWN5 251 aa6.17□□□□□ -1.42
HDAC9-219ENST00000461159 KTN1-AS1Q86SY8 53 aa6.17□□□□□ -1.42
HDAC9-219ENST00000461159 RHPN1-AS1Q9BWJ2 59 aa6.17□□□□□ -1.42
HDAC9-219ENST00000461159 LINC00474Q9P2X8 69 aa6.17□□□□□ -1.42
HDAC9-219ENST00000461159 XCL2Q9UBD3 114 aa6.17□□□□□ -1.42
HDAC9-219ENST00000461159 NBEAL2Q6ZNJ1 2754 aa6.17□□□□□ -1.42
HDAC9-219ENST00000461159 GNRH2O43555 120 aa6.17□□□□□ -1.42
HDAC9-219ENST00000461159 RNASE3P12724 160 aaKnown RBP6.17□□□□□ -1.42
HDAC9-219ENST00000461159 POLR2KP53803 58 aaKnown RBP6.17□□□□□ -1.42
HDAC9-219ENST00000461159 Q6JHZ5 121 aa6.17□□□□□ -1.42
HDAC9-219ENST00000461159 NOTCH1P46531 2555 aa6.17□□□□□ -1.42
HDAC9-219ENST00000461159 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.16□□□□□ -1.42
HDAC9-219ENST00000461159 RBMY1BA6NDE4 496 aaKnown RBP6.16□□□□□ -1.42
HDAC9-219ENST00000461159 RBMY1EA6NEQ0 496 aaKnown RBP6.16□□□□□ -1.42
HDAC9-219ENST00000461159 RBMY1DP0C7P1 496 aaKnown RBP6.16□□□□□ -1.42
HDAC9-219ENST00000461159 RBMY1A1P0DJD3 496 aaKnown RBP6.16□□□□□ -1.42
HDAC9-219ENST00000461159 RBMY1CP0DJD4 496 aa6.16□□□□□ -1.42
HDAC9-219ENST00000461159 KRTAP10-3P60369 221 aa6.16□□□□□ -1.42
HDAC9-219ENST00000461159 RBMY1FQ15415 496 aaKnown RBP6.16□□□□□ -1.42
HDAC9-219ENST00000461159 VSIG2Q96IQ7 327 aa6.16□□□□□ -1.42
HDAC9-219ENST00000461159 SOCS3O14543 225 aa6.16□□□□□ -1.42
HDAC9-219ENST00000461159 COX6CP09669 75 aa6.16□□□□□ -1.42
HDAC9-219ENST00000461159 TSPEAR-AS2P59090 65 aa6.16□□□□□ -1.42
HDAC9-219ENST00000461159 ZNF876PQ49A33 203 aa6.16□□□□□ -1.42
HDAC9-219ENST00000461159 PRR26Q8N8Z3 221 aa6.16□□□□□ -1.42
HDAC9-219ENST00000461159 TIMM21Q9BVV7 248 aa6.16□□□□□ -1.42
HDAC9-219ENST00000461159 F5H697 171 aa6.15□□□□□ -1.42
HDAC9-219ENST00000461159 LEPROTO15243 131 aa6.15□□□□□ -1.42
HDAC9-219ENST00000461159 LINC00315P59091 139 aa6.15□□□□□ -1.42
HDAC9-219ENST00000461159 RPL39P62891 51 aaKnown RBP6.15□□□□□ -1.42
HDAC9-219ENST00000461159 SERTAD4-AS1Q5TG53 156 aa6.15□□□□□ -1.42
HDAC9-219ENST00000461159 SUMO4Q6EEV6 95 aa6.15□□□□□ -1.42
HDAC9-219ENST00000461159 C6orf223Q8N319 242 aa6.15□□□□□ -1.42
HDAC9-219ENST00000461159 KIF25-AS1Q9Y6Z4 181 aa6.15□□□□□ -1.42
HDAC9-219ENST00000461159 SDHAF1A6NFY7 115 aa6.15□□□□□ -1.42
HDAC9-219ENST00000461159 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.15□□□□□ -1.42
HDAC9-219ENST00000461159 TMEM223A0PJW6 202 aa6.14□□□□□ -1.43
HDAC9-219ENST00000461159 LST1O00453 97 aa6.14□□□□□ -1.43
HDAC9-219ENST00000461159 BCE1O60756 84 aa6.14□□□□□ -1.43
HDAC9-219ENST00000461159 PROK1P58294 105 aa6.14□□□□□ -1.43
HDAC9-219ENST00000461159 AMELXQ99217 191 aa6.14□□□□□ -1.43
HDAC9-219ENST00000461159 TRBV27A0A0K0K1C4 114 aa6.14□□□□□ -1.43
HDAC9-219ENST00000461159 F6UB75 175 aa6.14□□□□□ -1.43
HDAC9-219ENST00000461159 DAD1P61803 113 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms