RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 SNRPFP62306 86 aaKnown RBP0.54□□□□□ -2.32
SYPL1-203ENST00000460770 PSENENQ9NZ42 101 aa0.54□□□□□ -2.32
SYPL1-203ENST00000460770 HIGD1BQ9P298 99 aa0.54□□□□□ -2.32
SYPL1-203ENST00000460770 SPCS1Q9Y6A9 102 aa0.54□□□□□ -2.32
SYPL1-203ENST00000460770 F8P00451 2351 aa0.54□□□□□ -2.32
SYPL1-203ENST00000460770 CCDC18Q5T9S5 1454 aa0.54□□□□□ -2.32
SYPL1-203ENST00000460770 CDK13Q14004 1512 aaKnown RBP0.54□□□□□ -2.32
SYPL1-203ENST00000460770 URB1O60287 2271 aaKnown RBP0.53□□□□□ -2.32
SYPL1-203ENST00000460770 SPHKAPQ2M3C7 1700 aa0.53□□□□□ -2.32
SYPL1-203ENST00000460770 ABCA3Q99758 1704 aa0.53□□□□□ -2.32
SYPL1-203ENST00000460770 SIPA1L3O60292 1781 aaPredicted RBP0.53□□□□□ -2.32
SYPL1-203ENST00000460770 ZNF236Q9UL36 1845 aa0.53□□□□□ -2.32
SYPL1-203ENST00000460770 A0A087WVE0 104 aa0.53□□□□□ -2.32
SYPL1-203ENST00000460770 TRBV6-1A0A0K0K1D8 114 aa0.53□□□□□ -2.32
SYPL1-203ENST00000460770 C10orf142B7Z368 130 aa0.53□□□□□ -2.32
SYPL1-203ENST00000460770 G3V318 75 aa0.53□□□□□ -2.32
SYPL1-203ENST00000460770 HMGN2P05204 90 aaKnown RBP0.53□□□□□ -2.32
SYPL1-203ENST00000460770 ACYP1P07311 99 aa0.53□□□□□ -2.32
SYPL1-203ENST00000460770 COX6A2Q02221 97 aa0.53□□□□□ -2.32
SYPL1-203ENST00000460770 NMSQ5H8A3 153 aa0.53□□□□□ -2.32
SYPL1-203ENST00000460770 C10orf113Q5VZT2 155 aa0.53□□□□□ -2.32
SYPL1-203ENST00000460770 SSBP3-AS1Q7Z2R9 100 aa0.53□□□□□ -2.32
SYPL1-203ENST00000460770 LINC00643Q86TS7 51 aa0.53□□□□□ -2.32
SYPL1-203ENST00000460770 DEFB107AQ8IZN7 70 aa0.53□□□□□ -2.32
SYPL1-203ENST00000460770 ST20Q9HBF5 79 aa0.53□□□□□ -2.32
SYPL1-203ENST00000460770 LINC00846Q9NV44 126 aa0.53□□□□□ -2.32
SYPL1-203ENST00000460770 UACAQ9BZF9 1416 aa0.53□□□□□ -2.32
SYPL1-203ENST00000460770 PRDM15P57071 1507 aaPredicted RBP0.53□□□□□ -2.33
SYPL1-203ENST00000460770 TTC37Q6PGP7 1564 aa0.53□□□□□ -2.33
SYPL1-203ENST00000460770 IFT172Q9UG01 1749 aa0.52□□□□□ -2.33
SYPL1-203ENST00000460770 SPINK7P58062 85 aa0.52□□□□□ -2.33
SYPL1-203ENST00000460770 WFDC2Q14508 124 aa0.52□□□□□ -2.33
SYPL1-203ENST00000460770 PLGLAQ15195 96 aa0.52□□□□□ -2.33
SYPL1-203ENST00000460770 TDRG1Q3Y452 100 aa0.52□□□□□ -2.33
SYPL1-203ENST00000460770 LINC01600Q96MT4 127 aa0.52□□□□□ -2.33
SYPL1-203ENST00000460770 SPRR4Q96PI1 79 aa0.52□□□□□ -2.33
SYPL1-203ENST00000460770 ADGRL2O95490 1459 aa0.52□□□□□ -2.33
SYPL1-203ENST00000460770 POLA1P09884 1462 aaPredicted RBP0.52□□□□□ -2.33
SYPL1-203ENST00000460770 KDM5AP29375 1690 aaKnown RBP0.52□□□□□ -2.33
SYPL1-203ENST00000460770 BTAF1O14981 1849 aa0.52□□□□□ -2.33
SYPL1-203ENST00000460770 PLXNB2O15031 1838 aa0.52□□□□□ -2.33
SYPL1-203ENST00000460770 WNK3Q9BYP7 1800 aa0.52□□□□□ -2.33
SYPL1-203ENST00000460770 PDCD11Q14690 1871 aaKnown RBP0.52□□□□□ -2.33
SYPL1-203ENST00000460770 ZNF462Q96JM2 2506 aa0.52□□□□□ -2.33
SYPL1-203ENST00000460770 AHNAKQ09666 5890 aaKnown RBP0.51□□□□□ -2.33
SYPL1-203ENST00000460770 FXYD6-FXYD2A0A087WZ82 144 aa0.51□□□□□ -2.33
SYPL1-203ENST00000460770 A0A0D9SG42 100 aa0.51□□□□□ -2.33
SYPL1-203ENST00000460770 MYMXA0A1B0GTQ4 84 aa0.51□□□□□ -2.33
SYPL1-203ENST00000460770 A0A1B0GU69 56 aa0.51□□□□□ -2.33
SYPL1-203ENST00000460770 CEBPZOSA8MTT3 80 aa0.51□□□□□ -2.33
SYPL1-203ENST00000460770 IQCF6A8MYZ5 107 aa0.51□□□□□ -2.33
SYPL1-203ENST00000460770 H0Y9P7 68 aa0.51□□□□□ -2.33
SYPL1-203ENST00000460770 TET3O43151 1660 aa0.51□□□□□ -2.33
SYPL1-203ENST00000460770 ATP10BO94823 1461 aa0.51□□□□□ -2.33
SYPL1-203ENST00000460770 CACNA1HO95180 2353 aa0.51□□□□□ -2.33
SYPL1-203ENST00000460770 AKAP12Q02952 1782 aa0.51□□□□□ -2.33
SYPL1-203ENST00000460770 TROQ12816 1431 aaPredicted RBP0.51□□□□□ -2.33
SYPL1-203ENST00000460770 CACNA1EQ15878 2313 aa0.51□□□□□ -2.33
SYPL1-203ENST00000460770 PIGYQ3MUY2 71 aa0.51□□□□□ -2.33
SYPL1-203ENST00000460770 IQSEC2Q5JU85 1478 aa0.51□□□□□ -2.33
SYPL1-203ENST00000460770 SBF2Q86WG5 1849 aa0.51□□□□□ -2.33
SYPL1-203ENST00000460770 LINC00472Q9H8W2 130 aa0.51□□□□□ -2.33
SYPL1-203ENST00000460770 CC2D2AQ9P2K1 1620 aa0.51□□□□□ -2.33
SYPL1-203ENST00000460770 FAM208BQ5VWN6 2430 aa0.5□□□□□ -2.33
SYPL1-203ENST00000460770 C2CD3Q4AC94 2353 aa0.5□□□□□ -2.33
SYPL1-203ENST00000460770 SSC5DA1L4H1 1573 aa0.5□□□□□ -2.33
SYPL1-203ENST00000460770 ERCC6L2Q5T890 1561 aa0.5□□□□□ -2.33
SYPL1-203ENST00000460770 HMGXB3Q12766 1538 aa0.5□□□□□ -2.33
SYPL1-203ENST00000460770 EHBP1L1Q8N3D4 1523 aa0.5□□□□□ -2.33
SYPL1-203ENST00000460770 ABCC2Q92887 1545 aa0.5□□□□□ -2.33
SYPL1-203ENST00000460770 NOTCH1P46531 2555 aa0.5□□□□□ -2.33
SYPL1-203ENST00000460770 A0A087WXM4 84 aa0.5□□□□□ -2.33
SYPL1-203ENST00000460770 SPATA8Q6RVD6 105 aa0.5□□□□□ -2.33
SYPL1-203ENST00000460770 C6orf201Q7Z4U5 140 aa0.5□□□□□ -2.33
SYPL1-203ENST00000460770 C10orf95Q9H7T3 257 aa0.5□□□□□ -2.33
SYPL1-203ENST00000460770 SPTBN1Q01082 2364 aaKnown RBP0.49□□□□□ -2.33
SYPL1-203ENST00000460770 RB1CC1Q8TDY2 1594 aa0.49□□□□□ -2.33
SYPL1-203ENST00000460770 ASH1LQ9NR48 2969 aaKnown RBP0.49□□□□□ -2.33
SYPL1-203ENST00000460770 TRBV7-4A0A0J9YYF1 115 aa0.49□□□□□ -2.33
SYPL1-203ENST00000460770 A0A1B0GUT8 65 aa0.49□□□□□ -2.33
SYPL1-203ENST00000460770 H3BUT2 72 aa0.49□□□□□ -2.33
SYPL1-203ENST00000460770 SMIM13P0DJ93 91 aa0.49□□□□□ -2.33
SYPL1-203ENST00000460770 IGLC2P0DOY2 106 aa0.49□□□□□ -2.33
SYPL1-203ENST00000460770 IGLC3P0DOY3 106 aa0.49□□□□□ -2.33
SYPL1-203ENST00000460770 PRB3Q04118 309 aaPredicted RBP0.49□□□□□ -2.33
SYPL1-203ENST00000460770 DEFB112Q30KQ8 113 aa0.49□□□□□ -2.33
SYPL1-203ENST00000460770 FAM103A1Q9BTL3 118 aaKnown RBP0.49□□□□□ -2.33
SYPL1-203ENST00000460770 CNFNQ9BYD5 112 aa0.49□□□□□ -2.33
SYPL1-203ENST00000460770 TP53AIP1Q9HCN2 124 aa0.49□□□□□ -2.33
SYPL1-203ENST00000460770 CRIPTQ9P021 101 aa0.49□□□□□ -2.33
SYPL1-203ENST00000460770 PRO0255Q9UI72 69 aa0.49□□□□□ -2.33
SYPL1-203ENST00000460770 KIF21AQ7Z4S6 1674 aa0.49□□□□□ -2.33
SYPL1-203ENST00000460770 SHROOM2Q13796 1616 aa0.49□□□□□ -2.33
SYPL1-203ENST00000460770 UNC13BO14795 1591 aa0.49□□□□□ -2.33
SYPL1-203ENST00000460770 LAMC3Q9Y6N6 1575 aa0.49□□□□□ -2.33
SYPL1-203ENST00000460770 NRXN1Q9ULB1 1477 aa0.48□□□□□ -2.33
SYPL1-203ENST00000460770 GPR98Q8WXG9 6306 aa0.48□□□□□ -2.33
SYPL1-203ENST00000460770 PKDREJQ9NTG1 2253 aa0.48□□□□□ -2.33
SYPL1-203ENST00000460770 USF3Q68DE3 2245 aa0.48□□□□□ -2.33
SYPL1-203ENST00000460770 CHD1O14646 1710 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms