RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 C2orf82Q6UX34 121 aa6.31□□□□□ -1.4
HDAC3-202ENST00000459727 KIR2DL5BQ8NHK3 375 aa6.31□□□□□ -1.4
HDAC3-202ENST00000459727 ZNF625Q96I27 306 aaPredicted RBP6.31□□□□□ -1.4
HDAC3-202ENST00000459727 ESM1Q9NQ30 184 aa6.31□□□□□ -1.4
HDAC3-202ENST00000459727 CCDC168Q8NDH2 2452 aa6.3□□□□□ -1.4
HDAC3-202ENST00000459727 TRAV13-1A0A0B4J241 112 aa6.3□□□□□ -1.4
HDAC3-202ENST00000459727 TRAV8-4A0A0B4J246 113 aa6.3□□□□□ -1.4
HDAC3-202ENST00000459727 COX7A2LO14548 114 aa6.3□□□□□ -1.4
HDAC3-202ENST00000459727 EIF4EBP3O60516 100 aaPredicted RBP6.3□□□□□ -1.4
HDAC3-202ENST00000459727 ACYP1P07311 99 aa6.3□□□□□ -1.4
HDAC3-202ENST00000459727 HIST2H2BCQ6DN03 193 aa6.3□□□□□ -1.4
HDAC3-202ENST00000459727 LINC01561Q8N1V8 128 aa6.3□□□□□ -1.4
HDAC3-202ENST00000459727 TRBV6-8A0A0A6YYG3 113 aa6.29□□□□□ -1.4
HDAC3-202ENST00000459727 F5H768 121 aa6.29□□□□□ -1.4
HDAC3-202ENST00000459727 SNCGO76070 127 aa6.29□□□□□ -1.4
HDAC3-202ENST00000459727 GAGE7O76087 117 aa6.29□□□□□ -1.4
HDAC3-202ENST00000459727 TRACP01848 142 aa6.29□□□□□ -1.4
HDAC3-202ENST00000459727 PRM2P04554 102 aa6.29□□□□□ -1.4
HDAC3-202ENST00000459727 GAGE12FP0CL80 117 aa6.29□□□□□ -1.4
HDAC3-202ENST00000459727 GAGE12GP0CL81 117 aa6.29□□□□□ -1.4
HDAC3-202ENST00000459727 GAGE12IP0CL82 117 aa6.29□□□□□ -1.4
HDAC3-202ENST00000459727 LINC00694P0DN24 101 aa6.29□□□□□ -1.4
HDAC3-202ENST00000459727 NTM-AS1Q6ZSK4 140 aa6.29□□□□□ -1.4
HDAC3-202ENST00000459727 CSNK1G2-AS1Q8NCQ2 148 aa6.29□□□□□ -1.4
HDAC3-202ENST00000459727 NTN5Q8WTR8 489 aaPredicted RBP6.29□□□□□ -1.4
HDAC3-202ENST00000459727 C19orf73Q9NVV2 129 aa6.29□□□□□ -1.4
HDAC3-202ENST00000459727 Q9UF83 564 aa6.29□□□□□ -1.4
HDAC3-202ENST00000459727 VPS13CQ709C8 3753 aa6.28□□□□□ -1.4
HDAC3-202ENST00000459727 PLAC8L1A1L4L8 177 aa6.28□□□□□ -1.4
HDAC3-202ENST00000459727 IBA57-AS1B1ANH7 110 aa6.28□□□□□ -1.4
HDAC3-202ENST00000459727 GIG44P09565 113 aaPredicted RBP6.28□□□□□ -1.4
HDAC3-202ENST00000459727 COX6A2Q02221 97 aa6.28□□□□□ -1.4
HDAC3-202ENST00000459727 DEFB121Q5J5C9 76 aa6.28□□□□□ -1.4
HDAC3-202ENST00000459727 Q6Q795 121 aa6.28□□□□□ -1.4
HDAC3-202ENST00000459727 C11orf44Q8N8P7 122 aa6.28□□□□□ -1.4
HDAC3-202ENST00000459727 COX7B2Q8TF08 81 aa6.28□□□□□ -1.4
HDAC3-202ENST00000459727 CRPP02741 224 aa6.27□□□□□ -1.41
HDAC3-202ENST00000459727 KRTAP1-1Q07627 177 aa6.27□□□□□ -1.41
HDAC3-202ENST00000459727 SHISA2Q6UWI4 295 aa6.27□□□□□ -1.41
HDAC3-202ENST00000459727 LINC00612Q8N6U2 182 aa6.27□□□□□ -1.41
HDAC3-202ENST00000459727 LYRM9A8MSI8 78 aa6.26□□□□□ -1.41
HDAC3-202ENST00000459727 RPL35AP18077 110 aaKnown RBP6.26□□□□□ -1.41
HDAC3-202ENST00000459727 XGP55808 180 aa6.26□□□□□ -1.41
HDAC3-202ENST00000459727 CKS1BP61024 79 aa6.26□□□□□ -1.41
HDAC3-202ENST00000459727 FHL2Q14192 279 aa6.26□□□□□ -1.41
HDAC3-202ENST00000459727 HIST2H2BDQ6DRA6 164 aa6.26□□□□□ -1.41
HDAC3-202ENST00000459727 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.26□□□□□ -1.41
HDAC3-202ENST00000459727 CHCHD5Q9BSY4 110 aa6.26□□□□□ -1.41
HDAC3-202ENST00000459727 A0A087WZ39 114 aa6.25□□□□□ -1.41
HDAC3-202ENST00000459727 A0A1B0GUV1 79 aa6.25□□□□□ -1.41
HDAC3-202ENST00000459727 A8MZ25 164 aa6.25□□□□□ -1.41
HDAC3-202ENST00000459727 INAFM2P0DMQ5 153 aa6.25□□□□□ -1.41
HDAC3-202ENST00000459727 CXCL5P42830 114 aa6.25□□□□□ -1.41
HDAC3-202ENST00000459727 RPL28P46779 137 aaKnown RBP6.25□□□□□ -1.41
HDAC3-202ENST00000459727 GAGE2BQ13066 116 aa6.25□□□□□ -1.41
HDAC3-202ENST00000459727 SS18Q15532 418 aa6.25□□□□□ -1.41
HDAC3-202ENST00000459727 GAGE2EQ4V326 116 aa6.25□□□□□ -1.41
HDAC3-202ENST00000459727 C9orf66Q5T8R8 295 aa6.25□□□□□ -1.41
HDAC3-202ENST00000459727 MUC7Q8TAX7 377 aa6.25□□□□□ -1.41
HDAC3-202ENST00000459727 GAGE2DQ9UEU5 116 aa6.25□□□□□ -1.41
HDAC3-202ENST00000459727 NACAE9PAV3 2078 aa6.25□□□□□ -1.41
HDAC3-202ENST00000459727 IGHV3OR16-9A0A0B4J2B5 98 aa6.24□□□□□ -1.41
HDAC3-202ENST00000459727 H0YGX0 51 aa6.24□□□□□ -1.41
HDAC3-202ENST00000459727 MT-ATP8P03928 68 aa6.24□□□□□ -1.41
HDAC3-202ENST00000459727 NPC2P61916 151 aa6.24□□□□□ -1.41
HDAC3-202ENST00000459727 PRO0255Q9UI72 69 aa6.24□□□□□ -1.41
HDAC3-202ENST00000459727 MAP1AP78559 2803 aaPredicted RBP6.24□□□□□ -1.41
HDAC3-202ENST00000459727 APOC4P55056 127 aa6.23□□□□□ -1.41
HDAC3-202ENST00000459727 GAGE6Q13070 117 aa6.23□□□□□ -1.41
HDAC3-202ENST00000459727 LINC00482Q8N8I6 264 aa6.23□□□□□ -1.41
HDAC3-202ENST00000459727 CLEC2BQ92478 149 aa6.23□□□□□ -1.41
HDAC3-202ENST00000459727 CITED1Q99966 193 aa6.23□□□□□ -1.41
HDAC3-202ENST00000459727 IMUPQ9GZP8 106 aa6.23□□□□□ -1.41
HDAC3-202ENST00000459727 SND1-IT1Q9HBX3 110 aa6.23□□□□□ -1.41
HDAC3-202ENST00000459727 CSPG4Q6UVK1 2322 aa6.22□□□□□ -1.41
HDAC3-202ENST00000459727 TEX49A0A1B0GTD5 131 aa6.22□□□□□ -1.41
HDAC3-202ENST00000459727 Q8IZM0 81 aa6.22□□□□□ -1.41
HDAC3-202ENST00000459727 DAND5Q8N907 189 aa6.22□□□□□ -1.41
HDAC3-202ENST00000459727 NBEAL1Q6ZS30 2694 aa6.22□□□□□ -1.41
HDAC3-202ENST00000459727 LINC00959A0A1B0GUT2 108 aa6.21□□□□□ -1.42
HDAC3-202ENST00000459727 A0A1B0GX51 115 aa6.21□□□□□ -1.42
HDAC3-202ENST00000459727 DNAL4O96015 105 aa6.21□□□□□ -1.42
HDAC3-202ENST00000459727 GYPEP15421 78 aa6.21□□□□□ -1.42
HDAC3-202ENST00000459727 LINC00158P58513 81 aa6.21□□□□□ -1.42
HDAC3-202ENST00000459727 COX17Q14061 63 aa6.21□□□□□ -1.42
HDAC3-202ENST00000459727 TTC32Q5I0X7 151 aa6.21□□□□□ -1.42
HDAC3-202ENST00000459727 SOSTDC1Q6X4U4 206 aa6.21□□□□□ -1.42
HDAC3-202ENST00000459727 MIR7-3HGQ8N6C7 128 aa6.21□□□□□ -1.42
HDAC3-202ENST00000459727 ANAPC13Q9BS18 74 aa6.21□□□□□ -1.42
HDAC3-202ENST00000459727 ANK2Q01484 3957 aa6.21□□□□□ -1.42
HDAC3-202ENST00000459727 STAB1Q9NY15 2570 aa6.21□□□□□ -1.42
HDAC3-202ENST00000459727 LOC100131303A0A0U1RQF7 123 aa6.2□□□□□ -1.42
HDAC3-202ENST00000459727 CRLF1O75462 422 aa6.2□□□□□ -1.42
HDAC3-202ENST00000459727 WFDC10AQ9H1F0 79 aa6.2□□□□□ -1.42
HDAC3-202ENST00000459727 TOMM7Q9P0U1 55 aa6.2□□□□□ -1.42
HDAC3-202ENST00000459727 IGLV4-60A0A075B6I1 120 aa6.19□□□□□ -1.42
HDAC3-202ENST00000459727 DEFB130BP0DP73 79 aa6.19□□□□□ -1.42
HDAC3-202ENST00000459727 DEFB130AP0DP74 79 aa6.19□□□□□ -1.42
HDAC3-202ENST00000459727 C6orf226Q5I0X4 101 aa6.19□□□□□ -1.42
HDAC3-202ENST00000459727 C15orf53Q8NAA6 179 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms