RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 CTAG1AP78358 180 aa16.64■□□□□ 0.25
U2AF1-204ENST00000459639 REG3AQ06141 175 aa16.64■□□□□ 0.25
U2AF1-204ENST00000459639 CLPSL2Q6UWE3 100 aa16.64■□□□□ 0.25
U2AF1-204ENST00000459639 IGHV3-30-3P0DP02 117 aa16.63■□□□□ 0.25
U2AF1-204ENST00000459639 LGALS3P17931 250 aaKnown RBP16.63■□□□□ 0.25
U2AF1-204ENST00000459639 TRAV8-3A0A0A6YYJ7 113 aa16.62■□□□□ 0.25
U2AF1-204ENST00000459639 ZNF815PA8K554 130 aa16.62■□□□□ 0.25
U2AF1-204ENST00000459639 PRR34Q9NV39 138 aa16.62■□□□□ 0.25
U2AF1-204ENST00000459639 IGHV3OR16-9A0A0B4J2B5 98 aa16.61■□□□□ 0.25
U2AF1-204ENST00000459639 IGHV3-30P01768 117 aa16.61■□□□□ 0.25
U2AF1-204ENST00000459639 IGHV3-33P01772 117 aa16.61■□□□□ 0.25
U2AF1-204ENST00000459639 IGHV3-30-5P0DP03 117 aa16.61■□□□□ 0.25
U2AF1-204ENST00000459639 HIGD1BQ9P298 99 aa16.61■□□□□ 0.25
U2AF1-204ENST00000459639 SMIM1B2RUZ4 78 aa16.6■□□□□ 0.25
U2AF1-204ENST00000459639 KLK12Q9UKR0 248 aa16.6■□□□□ 0.25
U2AF1-204ENST00000459639 IGLV5-39A0A0G2JS06 123 aa16.59■□□□□ 0.25
U2AF1-204ENST00000459639 CCL18P55774 89 aa16.59■□□□□ 0.25
U2AF1-204ENST00000459639 LINC01556Q5JQF7 62 aa16.59■□□□□ 0.25
U2AF1-204ENST00000459639 LINC00588Q9Y4M8 146 aa16.59■□□□□ 0.25
U2AF1-204ENST00000459639 PRKDCP78527 4128 aaKnown RBP16.57■□□□□ 0.24
U2AF1-204ENST00000459639 A0A087WZ39 114 aa16.56■□□□□ 0.24
U2AF1-204ENST00000459639 NUPR2A6NF83 97 aa16.56■□□□□ 0.24
U2AF1-204ENST00000459639 XCL1P47992 114 aa16.56■□□□□ 0.24
U2AF1-204ENST00000459639 DNAH10OSP0CZ25 163 aa16.56■□□□□ 0.24
U2AF1-204ENST00000459639 CHCHD10Q8WYQ3 142 aaPredicted RBP16.56■□□□□ 0.24
U2AF1-204ENST00000459639 CRPP02741 224 aa16.55■□□□□ 0.24
U2AF1-204ENST00000459639 CD164L2Q6UWJ8 174 aa16.55■□□□□ 0.24
U2AF1-204ENST00000459639 ENHOQ6UWT2 76 aa16.55■□□□□ 0.24
U2AF1-204ENST00000459639 M0R143 59 aa16.54■□□□□ 0.24
U2AF1-204ENST00000459639 ZFAND6Q6FIF0 208 aa16.54■□□□□ 0.24
U2AF1-204ENST00000459639 UPK3BQ9BT76 320 aa16.54■□□□□ 0.24
U2AF1-204ENST00000459639 SCGB1D4Q6XE38 83 aa16.53■□□□□ 0.24
U2AF1-204ENST00000459639 LINC01561Q8N1V8 128 aa16.53■□□□□ 0.24
U2AF1-204ENST00000459639 APLNQ9ULZ1 77 aa16.53■□□□□ 0.24
U2AF1-204ENST00000459639 SNHG12Q9BXW3 62 aa16.53■□□□□ 0.24
U2AF1-204ENST00000459639 IGLV10-54A0A075B6I4 117 aa16.52■□□□□ 0.23
U2AF1-204ENST00000459639 TRAV8-4A0A0B4J246 113 aa16.52■□□□□ 0.23
U2AF1-204ENST00000459639 C5orf38Q86SI9 138 aa16.52■□□□□ 0.23
U2AF1-204ENST00000459639 UBE2WQ96B02 151 aa16.52■□□□□ 0.23
U2AF1-204ENST00000459639 NDUFA12Q9UI09 145 aa16.52■□□□□ 0.23
U2AF1-204ENST00000459639 KLK5Q9Y337 293 aaPredicted RBP16.52■□□□□ 0.23
U2AF1-204ENST00000459639 HSD52Q0P140 79 aa16.51■□□□□ 0.23
U2AF1-204ENST00000459639 EREGO14944 169 aa16.5■□□□□ 0.23
U2AF1-204ENST00000459639 MIAQ16674 131 aa16.5■□□□□ 0.23
U2AF1-204ENST00000459639 HINT1P49773 126 aaPredicted RBP16.49■□□□□ 0.23
U2AF1-204ENST00000459639 COX7A2LO14548 114 aa16.48■□□□□ 0.23
U2AF1-204ENST00000459639 NDUFA1O15239 70 aa16.48■□□□□ 0.23
U2AF1-204ENST00000459639 FOXI1Q12951 378 aa16.48■□□□□ 0.23
U2AF1-204ENST00000459639 C10orf126Q8N4M7 172 aa16.48■□□□□ 0.23
U2AF1-204ENST00000459639 TAL2Q16559 108 aa16.46■□□□□ 0.23
U2AF1-204ENST00000459639 COX7B2Q8TF08 81 aa16.46■□□□□ 0.23
U2AF1-204ENST00000459639 GAGE12HA6NDE8 117 aa16.46■□□□□ 0.23
U2AF1-204ENST00000459639 BVES-AS1Q5T3Y7 98 aa16.46■□□□□ 0.23
U2AF1-204ENST00000459639 A0A0J9YXY3 114 aa16.45■□□□□ 0.22
U2AF1-204ENST00000459639 BATFQ16520 125 aa16.45■□□□□ 0.22
U2AF1-204ENST00000459639 SPANXB1Q9NS25 103 aaPredicted RBP16.43■□□□□ 0.22
U2AF1-204ENST00000459639 LBHQ53QV2 105 aaPredicted RBP16.43■□□□□ 0.22
U2AF1-204ENST00000459639 ZNF625Q96I27 306 aaPredicted RBP16.43■□□□□ 0.22
U2AF1-204ENST00000459639 Q9H8V8 135 aa16.43■□□□□ 0.22
U2AF1-204ENST00000459639 MALP21145 153 aa16.42■□□□□ 0.22
U2AF1-204ENST00000459639 HIST1H4GQ99525 98 aa16.42■□□□□ 0.22
U2AF1-204ENST00000459639 TOMM7Q9P0U1 55 aa16.42■□□□□ 0.22
U2AF1-204ENST00000459639 HERV-K104P63124 156 aa16.4■□□□□ 0.22
U2AF1-204ENST00000459639 UBE2DNLQ8IWF7 75 aa16.4■□□□□ 0.22
U2AF1-204ENST00000459639 Q8IZM0 81 aa16.4■□□□□ 0.22
U2AF1-204ENST00000459639 IBA57-AS1B1ANH7 110 aa16.4■□□□□ 0.22
U2AF1-204ENST00000459639 TMEM238C9JI98 176 aa16.4■□□□□ 0.22
U2AF1-204ENST00000459639 DYNC2H1Q8NCM8 4307 aaKnown RBP16.39■□□□□ 0.21
U2AF1-204ENST00000459639 KRTAP26-1Q6PEX3 210 aa16.39■□□□□ 0.21
U2AF1-204ENST00000459639 CEND1Q8N111 149 aa16.39■□□□□ 0.21
U2AF1-204ENST00000459639 ORAOV1Q8WV07 137 aa16.39■□□□□ 0.21
U2AF1-204ENST00000459639 FBN3Q75N90 2809 aa16.38■□□□□ 0.21
U2AF1-204ENST00000459639 K7EP13 123 aa16.38■□□□□ 0.21
U2AF1-204ENST00000459639 TIMM17BO60830 172 aa16.38■□□□□ 0.21
U2AF1-204ENST00000459639 APOMO95445 188 aa16.38■□□□□ 0.21
U2AF1-204ENST00000459639 GCSHP23434 173 aa16.38■□□□□ 0.21
U2AF1-204ENST00000459639 SRSF9Q13242 221 aaKnown RBP eCLIP16.38■□□□□ 0.21
U2AF1-204ENST00000459639 SFTA2Q6UW10 78 aa16.38■□□□□ 0.21
U2AF1-204ENST00000459639 C1orf43Q9BWL3 253 aa16.38■□□□□ 0.21
U2AF1-204ENST00000459639 TM2D2Q9BX73 214 aa16.38■□□□□ 0.21
U2AF1-204ENST00000459639 PRSS2P07478 247 aa16.37■□□□□ 0.21
U2AF1-204ENST00000459639 LITAFQ99732 161 aa16.37■□□□□ 0.21
U2AF1-204ENST00000459639 C6orf226Q5I0X4 101 aa16.35■□□□□ 0.21
U2AF1-204ENST00000459639 COL5A1-AS1Q5SY13 56 aa16.35■□□□□ 0.21
U2AF1-204ENST00000459639 KIAA0087Q14695 138 aa16.34■□□□□ 0.21
U2AF1-204ENST00000459639 IGKV2D-24A0A075B6R9 120 aa16.33■□□□□ 0.2
U2AF1-204ENST00000459639 CXCL5P42830 114 aa16.33■□□□□ 0.2
U2AF1-204ENST00000459639 FXYD2P54710 66 aa16.33■□□□□ 0.2
U2AF1-204ENST00000459639 CIRBPQ14011 172 aaKnown RBP16.33■□□□□ 0.2
U2AF1-204ENST00000459639 SPANXDQ9BXN6 97 aa16.33■□□□□ 0.2
U2AF1-204ENST00000459639 Q9HAA7 133 aa16.33■□□□□ 0.2
U2AF1-204ENST00000459639 SPANXCQ9NY87 97 aa16.33■□□□□ 0.2
U2AF1-204ENST00000459639 CFAP161Q6P656 301 aa16.32■□□□□ 0.2
U2AF1-204ENST00000459639 Q6ZVH6 145 aa16.31■□□□□ 0.2
U2AF1-204ENST00000459639 PTTG1IPP53801 180 aa16.3■□□□□ 0.2
U2AF1-204ENST00000459639 MEIG1Q5JSS6 88 aa16.3■□□□□ 0.2
U2AF1-204ENST00000459639 MUC7Q8TAX7 377 aa16.3■□□□□ 0.2
U2AF1-204ENST00000459639 RMI2Q96E14 147 aa16.3■□□□□ 0.2
U2AF1-204ENST00000459639 A6NDN8 102 aa16.3■□□□□ 0.2
U2AF1-204ENST00000459639 SPAG11BQ08648 103 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 1334.1 ms