RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 FAM222AQ5U5X8 452 aa8.52□□□□□ -1.05
SYNE2-207ENST00000458046 CFAP126Q5VTH2 177 aa8.52□□□□□ -1.05
SYNE2-207ENST00000458046 TMEM223A0PJW6 202 aa8.52□□□□□ -1.05
SYNE2-207ENST00000458046 RHOHQ15669 191 aa8.52□□□□□ -1.05
SYNE2-207ENST00000458046 CEMP1Q6PRD7 247 aaPredicted RBP8.52□□□□□ -1.05
SYNE2-207ENST00000458046 NFE4Q86UQ8 179 aa8.52□□□□□ -1.05
SYNE2-207ENST00000458046 SLURP1P55000 103 aa8.51□□□□□ -1.05
SYNE2-207ENST00000458046 DEFB131AP59861 70 aa8.51□□□□□ -1.05
SYNE2-207ENST00000458046 UBE2D3P61077 147 aa8.51□□□□□ -1.05
SYNE2-207ENST00000458046 UBE2D2P62837 147 aa8.51□□□□□ -1.05
SYNE2-207ENST00000458046 RNASE13Q5GAN3 156 aaKnown RBP8.51□□□□□ -1.05
SYNE2-207ENST00000458046 IGLV4-3A0A075B6K6 122 aa8.51□□□□□ -1.05
SYNE2-207ENST00000458046 TRAV2A0A0B4J234 112 aa8.51□□□□□ -1.05
SYNE2-207ENST00000458046 TCL1BO95988 128 aa8.51□□□□□ -1.05
SYNE2-207ENST00000458046 MT-ATP8P03928 68 aa8.51□□□□□ -1.05
SYNE2-207ENST00000458046 SCGB1C2P0DMR2 95 aa8.51□□□□□ -1.05
SYNE2-207ENST00000458046 ZNF22P17026 224 aaPredicted RBP8.51□□□□□ -1.05
SYNE2-207ENST00000458046 H7C2G1 150 aa8.5□□□□□ -1.05
SYNE2-207ENST00000458046 INAFM2P0DMQ5 153 aa8.5□□□□□ -1.05
SYNE2-207ENST00000458046 AKAP9Q99996 3911 aa8.5□□□□□ -1.05
SYNE2-207ENST00000458046 LEPROTO15243 131 aa8.5□□□□□ -1.05
SYNE2-207ENST00000458046 DSCR9P59020 149 aa8.5□□□□□ -1.05
SYNE2-207ENST00000458046 FOXI1Q12951 378 aa8.5□□□□□ -1.05
SYNE2-207ENST00000458046 C11orf72Q8NBR9 251 aa8.5□□□□□ -1.05
SYNE2-207ENST00000458046 ZNF702PQ9H963 129 aa8.5□□□□□ -1.05
SYNE2-207ENST00000458046 PRO1854Q9UHT4 67 aa8.5□□□□□ -1.05
SYNE2-207ENST00000458046 C10orf126Q8N4M7 172 aa8.49□□□□□ -1.05
SYNE2-207ENST00000458046 LINC00337Q8N6G1 96 aa8.49□□□□□ -1.05
SYNE2-207ENST00000458046 MUSTN1Q8IVN3 82 aa8.49□□□□□ -1.05
SYNE2-207ENST00000458046 CD28P10747 220 aa8.48□□□□□ -1.05
SYNE2-207ENST00000458046 Q6ZSN1 163 aa8.48□□□□□ -1.05
SYNE2-207ENST00000458046 DPH3Q96FX2 82 aa8.48□□□□□ -1.05
SYNE2-207ENST00000458046 A0A096LNT2 108 aa8.48□□□□□ -1.05
SYNE2-207ENST00000458046 Q6ZUT4 128 aa8.47□□□□□ -1.05
SYNE2-207ENST00000458046 TRAV8-3A0A0A6YYJ7 113 aa8.47□□□□□ -1.05
SYNE2-207ENST00000458046 Q6YL49 198 aa8.47□□□□□ -1.05
SYNE2-207ENST00000458046 FAM104AQ969W3 186 aa8.47□□□□□ -1.05
SYNE2-207ENST00000458046 C11orf68Q9H3H3 251 aaKnown RBP8.47□□□□□ -1.05
SYNE2-207ENST00000458046 H3BMM0 161 aa8.47□□□□□ -1.05
SYNE2-207ENST00000458046 NDUFS5O43920 106 aa8.47□□□□□ -1.05
SYNE2-207ENST00000458046 IFITM1P13164 125 aa8.47□□□□□ -1.05
SYNE2-207ENST00000458046 BRK1Q8WUW1 75 aa8.47□□□□□ -1.05
SYNE2-207ENST00000458046 IGHV3-30-3P0DP02 117 aa8.46□□□□□ -1.06
SYNE2-207ENST00000458046 IGHV3-38A0A0C4DH36 116 aa8.46□□□□□ -1.06
SYNE2-207ENST00000458046 TMEM61Q8N0U2 210 aa8.46□□□□□ -1.06
SYNE2-207ENST00000458046 TLN2Q9Y4G6 2542 aa8.45□□□□□ -1.06
SYNE2-207ENST00000458046 ATRQ13535 2644 aa8.45□□□□□ -1.06
SYNE2-207ENST00000458046 TRBV20-1A0A075B6N2 111 aa8.45□□□□□ -1.06
SYNE2-207ENST00000458046 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.45□□□□□ -1.06
SYNE2-207ENST00000458046 A0A0J9YXY3 114 aa8.45□□□□□ -1.06
SYNE2-207ENST00000458046 IGKV2-29A2NJV5 120 aaPredicted RBP8.45□□□□□ -1.06
SYNE2-207ENST00000458046 PRSS2P07478 247 aa8.45□□□□□ -1.06
SYNE2-207ENST00000458046 DAD1P61803 113 aa8.45□□□□□ -1.06
SYNE2-207ENST00000458046 C3orf56Q8N813 242 aa8.45□□□□□ -1.06
SYNE2-207ENST00000458046 H0Y9J4 135 aa8.45□□□□□ -1.06
SYNE2-207ENST00000458046 IGHV3-33P01772 117 aa8.45□□□□□ -1.06
SYNE2-207ENST00000458046 Q6ZSV7 163 aa8.45□□□□□ -1.06
SYNE2-207ENST00000458046 WFDC11Q8NEX6 87 aa8.45□□□□□ -1.06
SYNE2-207ENST00000458046 TMEM263Q8WUH6 116 aaKnown RBP8.45□□□□□ -1.06
SYNE2-207ENST00000458046 TIMM21Q9BVV7 248 aa8.45□□□□□ -1.06
SYNE2-207ENST00000458046 ZNF469Q96JG9 3925 aaPredicted RBP8.44□□□□□ -1.06
SYNE2-207ENST00000458046 A8MWV9 139 aa8.44□□□□□ -1.06
SYNE2-207ENST00000458046 M0R2P5 195 aa8.44□□□□□ -1.06
SYNE2-207ENST00000458046 ATP6V0E2Q8NHE4 81 aa8.44□□□□□ -1.06
SYNE2-207ENST00000458046 Q1RN00 199 aa8.44□□□□□ -1.06
SYNE2-207ENST00000458046 APCP25054 2843 aa8.43□□□□□ -1.06
SYNE2-207ENST00000458046 NPC2P61916 151 aa8.43□□□□□ -1.06
SYNE2-207ENST00000458046 TEN1Q86WV5 123 aa8.43□□□□□ -1.06
SYNE2-207ENST00000458046 TM2D3Q9BRN9 247 aa8.43□□□□□ -1.06
SYNE2-207ENST00000458046 KRTAP10-9P60411 292 aa8.43□□□□□ -1.06
SYNE2-207ENST00000458046 MRPS36P82909 103 aaKnown RBP8.43□□□□□ -1.06
SYNE2-207ENST00000458046 ADAMTSL4-AS1Q5T5F5 129 aa8.42□□□□□ -1.06
SYNE2-207ENST00000458046 PRR15Q8IV56 129 aa8.42□□□□□ -1.06
SYNE2-207ENST00000458046 CHCHD7Q9BUK0 85 aa8.42□□□□□ -1.06
SYNE2-207ENST00000458046 C6orf223Q8N319 242 aa8.42□□□□□ -1.06
SYNE2-207ENST00000458046 PPDPFLQ8WWR9 84 aa8.42□□□□□ -1.06
SYNE2-207ENST00000458046 LINC00467Q9BRT7 94 aa8.42□□□□□ -1.06
SYNE2-207ENST00000458046 JMJD1CQ15652 2540 aa8.42□□□□□ -1.06
SYNE2-207ENST00000458046 NIPBLQ6KC79 2804 aaeCLIP8.41□□□□□ -1.06
SYNE2-207ENST00000458046 FSHBP01225 129 aa8.41□□□□□ -1.06
SYNE2-207ENST00000458046 DYNLRB2Q8TF09 96 aa8.41□□□□□ -1.06
SYNE2-207ENST00000458046 UBE2D4Q9Y2X8 147 aa8.41□□□□□ -1.06
SYNE2-207ENST00000458046 IGHV3OR16-12A0A075B7B8 117 aa8.41□□□□□ -1.06
SYNE2-207ENST00000458046 A0A0B4J2C4 111 aa8.41□□□□□ -1.06
SYNE2-207ENST00000458046 SLC25A20O43772 301 aa8.41□□□□□ -1.06
SYNE2-207ENST00000458046 NDUFA12Q9UI09 145 aa8.41□□□□□ -1.06
SYNE2-207ENST00000458046 PRRC2AP48634 2157 aaKnown RBP8.4□□□□□ -1.06
SYNE2-207ENST00000458046 NOTCH3Q9UM47 2321 aa8.4□□□□□ -1.06
SYNE2-207ENST00000458046 IGHV1-58A0A0C4DH39 117 aa8.4□□□□□ -1.06
SYNE2-207ENST00000458046 PRR3P79522 188 aaKnown RBP8.4□□□□□ -1.06
SYNE2-207ENST00000458046 SBSPONQ8IVN8 264 aa8.4□□□□□ -1.06
SYNE2-207ENST00000458046 CHCHD10Q8WYQ3 142 aaPredicted RBP8.4□□□□□ -1.06
SYNE2-207ENST00000458046 LITAFQ99732 161 aa8.4□□□□□ -1.06
SYNE2-207ENST00000458046 XCL2Q9UBD3 114 aa8.4□□□□□ -1.06
SYNE2-207ENST00000458046 SONP18583 2426 aaKnown RBP8.4□□□□□ -1.06
SYNE2-207ENST00000458046 NACAE9PAV3 2078 aa8.4□□□□□ -1.06
SYNE2-207ENST00000458046 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.4□□□□□ -1.07
SYNE2-207ENST00000458046 CDK2AP2O75956 126 aa8.39□□□□□ -1.07
SYNE2-207ENST00000458046 REG3AQ06141 175 aa8.39□□□□□ -1.07
SYNE2-207ENST00000458046 Q6Q795 121 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms