RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 GAGE4Q13068 117 aa13.07□□□□□ -0.32
SEMA3B-209ENST00000456560 GAGE5Q13069 117 aa13.07□□□□□ -0.32
SEMA3B-209ENST00000456560 LINC00242Q5T6M2 205 aa13.07□□□□□ -0.32
SEMA3B-209ENST00000456560 TMEM101Q96IK0 257 aa13.07□□□□□ -0.32
SEMA3B-209ENST00000456560 SETD2Q9BYW2 2564 aaPredicted RBP13.05□□□□□ -0.32
SEMA3B-209ENST00000456560 TRBV10-2A0A0K0K1G8 114 aa13.05□□□□□ -0.32
SEMA3B-209ENST00000456560 SNCGO76070 127 aa13.05□□□□□ -0.32
SEMA3B-209ENST00000456560 HERVK_113P63121 156 aa13.05□□□□□ -0.32
SEMA3B-209ENST00000456560 MIAQ16674 131 aa13.05□□□□□ -0.32
SEMA3B-209ENST00000456560 TEX49A0A1B0GTD5 131 aa13.04□□□□□ -0.32
SEMA3B-209ENST00000456560 TIMM17BO60830 172 aa13.04□□□□□ -0.32
SEMA3B-209ENST00000456560 GAGE7O76087 117 aa13.04□□□□□ -0.32
SEMA3B-209ENST00000456560 GAGE12FP0CL80 117 aa13.04□□□□□ -0.32
SEMA3B-209ENST00000456560 GAGE12GP0CL81 117 aa13.04□□□□□ -0.32
SEMA3B-209ENST00000456560 GAGE12IP0CL82 117 aa13.04□□□□□ -0.32
SEMA3B-209ENST00000456560 KRTAP10-3P60369 221 aa13.04□□□□□ -0.32
SEMA3B-209ENST00000456560 IGLV5-39A0A0G2JS06 123 aa13.04□□□□□ -0.32
SEMA3B-209ENST00000456560 ICOSQ9Y6W8 199 aa13.04□□□□□ -0.32
SEMA3B-209ENST00000456560 NDUFA1O15239 70 aa13.03□□□□□ -0.32
SEMA3B-209ENST00000456560 CDC42SE2Q9NRR3 84 aa13.03□□□□□ -0.32
SEMA3B-209ENST00000456560 TEP1Q99973 2627 aaKnown RBP13.03□□□□□ -0.32
SEMA3B-209ENST00000456560 TRGV2A0A075B6R0 118 aa13.03□□□□□ -0.32
SEMA3B-209ENST00000456560 TRAV8-4A0A0B4J246 113 aa13.03□□□□□ -0.32
SEMA3B-209ENST00000456560 RPL13AP40429 203 aaKnown RBP13.03□□□□□ -0.32
SEMA3B-209ENST00000456560 GAGE2BQ13066 116 aa13.03□□□□□ -0.32
SEMA3B-209ENST00000456560 GAGE2EQ4V326 116 aa13.03□□□□□ -0.32
SEMA3B-209ENST00000456560 GAGE2DQ9UEU5 116 aa13.03□□□□□ -0.32
SEMA3B-209ENST00000456560 TRBV6-4A0A1B0GX49 114 aa13.02□□□□□ -0.33
SEMA3B-209ENST00000456560 NPC2P61916 151 aa13.02□□□□□ -0.33
SEMA3B-209ENST00000456560 LINC01600Q96MT4 127 aa13.02□□□□□ -0.33
SEMA3B-209ENST00000456560 NIPBLQ6KC79 2804 aaeCLIP13.01□□□□□ -0.33
SEMA3B-209ENST00000456560 C2orf82Q6UX34 121 aa13.01□□□□□ -0.33
SEMA3B-209ENST00000456560 UBE2WQ96B02 151 aa13.01□□□□□ -0.33
SEMA3B-209ENST00000456560 LOC100131303A0A0U1RQF7 123 aa13□□□□□ -0.33
SEMA3B-209ENST00000456560 CRLF1O75462 422 aa13□□□□□ -0.33
SEMA3B-209ENST00000456560 COX6CP09669 75 aa13□□□□□ -0.33
SEMA3B-209ENST00000456560 TMEM243Q9BU79 118 aa13□□□□□ -0.33
SEMA3B-209ENST00000456560 JMJD1CQ15652 2540 aa12.99□□□□□ -0.33
SEMA3B-209ENST00000456560 TRAV13-1A0A0B4J241 112 aa12.98□□□□□ -0.33
SEMA3B-209ENST00000456560 SMIM1B2RUZ4 78 aa12.98□□□□□ -0.33
SEMA3B-209ENST00000456560 H7C423 109 aa12.98□□□□□ -0.33
SEMA3B-209ENST00000456560 IFITM1P13164 125 aa12.98□□□□□ -0.33
SEMA3B-209ENST00000456560 FHL2Q14192 279 aa12.98□□□□□ -0.33
SEMA3B-209ENST00000456560 LINC00482Q8N8I6 264 aa12.98□□□□□ -0.33
SEMA3B-209ENST00000456560 F5H768 121 aa12.97□□□□□ -0.33
SEMA3B-209ENST00000456560 GAGE6Q13070 117 aa12.97□□□□□ -0.33
SEMA3B-209ENST00000456560 NOTCH3Q9UM47 2321 aa12.97□□□□□ -0.33
SEMA3B-209ENST00000456560 TRGV4A0A0C4DH28 118 aa12.97□□□□□ -0.33
SEMA3B-209ENST00000456560 CLEC2BQ92478 149 aa12.97□□□□□ -0.33
SEMA3B-209ENST00000456560 MAST4O15021 2626 aa12.96□□□□□ -0.33
SEMA3B-209ENST00000456560 NHLRC4P0CG21 123 aaPredicted RBP12.96□□□□□ -0.33
SEMA3B-209ENST00000456560 NDUFV3P56181 108 aaKnown RBP12.96□□□□□ -0.33
SEMA3B-209ENST00000456560 Q9H8V8 135 aa12.96□□□□□ -0.33
SEMA3B-209ENST00000456560 UBE2L6O14933 153 aa12.96□□□□□ -0.34
SEMA3B-209ENST00000456560 TTC32Q5I0X7 151 aa12.96□□□□□ -0.34
SEMA3B-209ENST00000456560 C15orf53Q8NAA6 179 aa12.96□□□□□ -0.34
SEMA3B-209ENST00000456560 H3BT86 120 aa12.95□□□□□ -0.34
SEMA3B-209ENST00000456560 PF4P02776 101 aa12.94□□□□□ -0.34
SEMA3B-209ENST00000456560 CIRBPQ14011 172 aaKnown RBP12.94□□□□□ -0.34
SEMA3B-209ENST00000456560 DAND5Q8N907 189 aa12.94□□□□□ -0.34
SEMA3B-209ENST00000456560 ZNF625Q96I27 306 aaPredicted RBP12.93□□□□□ -0.34
SEMA3B-209ENST00000456560 SS18L2Q9UHA2 77 aa12.93□□□□□ -0.34
SEMA3B-209ENST00000456560 LST1O00453 97 aa12.93□□□□□ -0.34
SEMA3B-209ENST00000456560 Q6Q795 121 aa12.93□□□□□ -0.34
SEMA3B-209ENST00000456560 B5MCH6 92 aa12.92□□□□□ -0.34
SEMA3B-209ENST00000456560 LINC00612Q8N6U2 182 aa12.92□□□□□ -0.34
SEMA3B-209ENST00000456560 KIR2DL5BQ8NHK3 375 aa12.92□□□□□ -0.34
SEMA3B-209ENST00000456560 LINC00308Q8TCZ7 52 aa12.92□□□□□ -0.34
SEMA3B-209ENST00000456560 C2CD3Q4AC94 2353 aa12.91□□□□□ -0.34
SEMA3B-209ENST00000456560 TRBV6-8A0A0A6YYG3 113 aa12.9□□□□□ -0.34
SEMA3B-209ENST00000456560 X6R8D5 127 aa12.88□□□□□ -0.35
SEMA3B-209ENST00000456560 IGLV4-60A0A075B6I1 120 aa12.88□□□□□ -0.35
SEMA3B-209ENST00000456560 HERV-K104P63124 156 aa12.88□□□□□ -0.35
SEMA3B-209ENST00000456560 PRIMA1Q86XR5 153 aa12.88□□□□□ -0.35
SEMA3B-209ENST00000456560 DEFB130BP0DP73 79 aa12.87□□□□□ -0.35
SEMA3B-209ENST00000456560 DEFB130AP0DP74 79 aa12.87□□□□□ -0.35
SEMA3B-209ENST00000456560 SOSTDC1Q6X4U4 206 aa12.87□□□□□ -0.35
SEMA3B-209ENST00000456560 CCDC179H3BU77 68 aa12.86□□□□□ -0.35
SEMA3B-209ENST00000456560 MRPL23Q16540 153 aaKnown RBP12.86□□□□□ -0.35
SEMA3B-209ENST00000456560 SPATA3Q8NHX4 192 aa12.86□□□□□ -0.35
SEMA3B-209ENST00000456560 DEFB121Q5J5C9 76 aa12.86□□□□□ -0.35
SEMA3B-209ENST00000456560 A0A0U1RRA0 63 aa12.85□□□□□ -0.35
SEMA3B-209ENST00000456560 FAM240AA0A1B0GVK7 77 aa12.85□□□□□ -0.35
SEMA3B-209ENST00000456560 SMIM9A6NGZ8 99 aa12.85□□□□□ -0.35
SEMA3B-209ENST00000456560 MEIG1Q5JSS6 88 aa12.85□□□□□ -0.35
SEMA3B-209ENST00000456560 COPS9Q8WXC6 57 aa12.85□□□□□ -0.35
SEMA3B-209ENST00000456560 CHCHD5Q9BSY4 110 aa12.85□□□□□ -0.35
SEMA3B-209ENST00000456560 PPDPFQ9H3Y8 114 aa12.84□□□□□ -0.35
SEMA3B-209ENST00000456560 C9orf66Q5T8R8 295 aa12.83□□□□□ -0.36
SEMA3B-209ENST00000456560 COX7B2Q8TF08 81 aa12.83□□□□□ -0.36
SEMA3B-209ENST00000456560 IGHV3OR16-9A0A0B4J2B5 98 aa12.82□□□□□ -0.36
SEMA3B-209ENST00000456560 GYPEP15421 78 aa12.81□□□□□ -0.36
SEMA3B-209ENST00000456560 IGKV3OR2-268A0A0C4DH90 116 aa12.81□□□□□ -0.36
SEMA3B-209ENST00000456560 COX7A2LO14548 114 aa12.8□□□□□ -0.36
SEMA3B-209ENST00000456560 TENM1Q9UKZ4 2725 aa12.79□□□□□ -0.36
SEMA3B-209ENST00000456560 A0A087WZ39 114 aa12.78□□□□□ -0.36
SEMA3B-209ENST00000456560 SHISA2Q6UWI4 295 aa12.78□□□□□ -0.36
SEMA3B-209ENST00000456560 ATRQ13535 2644 aa12.78□□□□□ -0.36
SEMA3B-209ENST00000456560 PRO0255Q9UI72 69 aa12.78□□□□□ -0.36
SEMA3B-209ENST00000456560 LINC00959A0A1B0GUT2 108 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms