RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 ZFHX3Q15911 3703 aa6.97□□□□□ -1.29
LINC01940-201ENST00000455228 SPG11Q96JI7 2443 aa6.97□□□□□ -1.29
LINC01940-201ENST00000455228 FLNBO75369 2602 aaKnown RBP6.96□□□□□ -1.29
LINC01940-201ENST00000455228 GHRHP01286 108 aa6.96□□□□□ -1.29
LINC01940-201ENST00000455228 C20orf203Q8NBC4 194 aa6.96□□□□□ -1.29
LINC01940-201ENST00000455228 CLEC2BQ92478 149 aa6.96□□□□□ -1.29
LINC01940-201ENST00000455228 IGHV3-16A0A0C4DH30 117 aa6.96□□□□□ -1.3
LINC01940-201ENST00000455228 H3BUA1 57 aa6.96□□□□□ -1.3
LINC01940-201ENST00000455228 CD28P10747 220 aa6.96□□□□□ -1.3
LINC01940-201ENST00000455228 RPL28P46779 137 aaKnown RBP6.96□□□□□ -1.3
LINC01940-201ENST00000455228 SPINK13Q1W4C9 94 aa6.96□□□□□ -1.3
LINC01940-201ENST00000455228 FAM229BQ4G0N7 80 aa6.96□□□□□ -1.3
LINC01940-201ENST00000455228 CSPG4Q6UVK1 2322 aa6.96□□□□□ -1.3
LINC01940-201ENST00000455228 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.95□□□□□ -1.3
LINC01940-201ENST00000455228 ZNF580Q9UK33 172 aa6.95□□□□□ -1.3
LINC01940-201ENST00000455228 DOPEY2Q9Y3R5 2298 aa6.95□□□□□ -1.3
LINC01940-201ENST00000455228 IGLV4-3A0A075B6K6 122 aa6.95□□□□□ -1.3
LINC01940-201ENST00000455228 IGHV1OR15-1A0A075B7D0 117 aa6.95□□□□□ -1.3
LINC01940-201ENST00000455228 IGHV3-73A0A0B4J1V6 119 aa6.95□□□□□ -1.3
LINC01940-201ENST00000455228 IGHV3-30-3P0DP02 117 aa6.95□□□□□ -1.3
LINC01940-201ENST00000455228 ADAMTSL4-AS1Q5T5F5 129 aa6.95□□□□□ -1.3
LINC01940-201ENST00000455228 C20orf197Q8N268 126 aa6.95□□□□□ -1.3
LINC01940-201ENST00000455228 SPATA3Q8NHX4 192 aa6.95□□□□□ -1.3
LINC01940-201ENST00000455228 MAP1AP78559 2803 aaPredicted RBP6.94□□□□□ -1.3
LINC01940-201ENST00000455228 PRRC2AP48634 2157 aaKnown RBP6.94□□□□□ -1.3
LINC01940-201ENST00000455228 A0A087WVE0 104 aa6.94□□□□□ -1.3
LINC01940-201ENST00000455228 M0R378 163 aa6.94□□□□□ -1.3
LINC01940-201ENST00000455228 IGHV4-38-2P0DP08 117 aa6.94□□□□□ -1.3
LINC01940-201ENST00000455228 LINC00846Q9NV44 126 aa6.94□□□□□ -1.3
LINC01940-201ENST00000455228 TRAV8-3A0A0A6YYJ7 113 aa6.93□□□□□ -1.3
LINC01940-201ENST00000455228 RNASE13Q5GAN3 156 aaKnown RBP6.93□□□□□ -1.3
LINC01940-201ENST00000455228 PTPN13Q12923 2485 aa6.93□□□□□ -1.3
LINC01940-201ENST00000455228 MIAQ16674 131 aa6.93□□□□□ -1.3
LINC01940-201ENST00000455228 NDUFA12Q9UI09 145 aa6.93□□□□□ -1.3
LINC01940-201ENST00000455228 PKD1L2Q7Z442 2459 aa6.93□□□□□ -1.3
LINC01940-201ENST00000455228 TRBV7-4A0A0J9YYF1 115 aa6.93□□□□□ -1.3
LINC01940-201ENST00000455228 K7EMT4 169 aa6.93□□□□□ -1.3
LINC01940-201ENST00000455228 NDUFS5O43920 106 aa6.93□□□□□ -1.3
LINC01940-201ENST00000455228 C8orf87E5RJ46 101 aa6.92□□□□□ -1.3
LINC01940-201ENST00000455228 ESRGQ1W209 222 aa6.92□□□□□ -1.3
LINC01940-201ENST00000455228 LYRM9A8MSI8 78 aa6.92□□□□□ -1.3
LINC01940-201ENST00000455228 S100A7L2Q5SY68 101 aa6.92□□□□□ -1.3
LINC01940-201ENST00000455228 MIFP14174 115 aa6.92□□□□□ -1.3
LINC01940-201ENST00000455228 CELSR1Q9NYQ6 3014 aa6.91□□□□□ -1.3
LINC01940-201ENST00000455228 IGHV4-61A0A0C4DH41 118 aa6.91□□□□□ -1.3
LINC01940-201ENST00000455228 A6NDX4 124 aa6.91□□□□□ -1.3
LINC01940-201ENST00000455228 IGLV1-40P01703 118 aa6.91□□□□□ -1.3
LINC01940-201ENST00000455228 Q6ZTC4 211 aa6.9□□□□□ -1.3
LINC01940-201ENST00000455228 CENPEQ02224 2701 aa6.9□□□□□ -1.3
LINC01940-201ENST00000455228 Q6ZVQ6 151 aa6.9□□□□□ -1.31
LINC01940-201ENST00000455228 ABCA2Q9BZC7 2435 aa6.89□□□□□ -1.31
LINC01940-201ENST00000455228 F8WEM9 126 aa6.89□□□□□ -1.31
LINC01940-201ENST00000455228 BAALC-AS2P0C853 105 aa6.89□□□□□ -1.31
LINC01940-201ENST00000455228 PROK1P58294 105 aa6.89□□□□□ -1.31
LINC01940-201ENST00000455228 Q6ZSV7 163 aa6.89□□□□□ -1.31
LINC01940-201ENST00000455228 C11orf44Q8N8P7 122 aa6.88□□□□□ -1.31
LINC01940-201ENST00000455228 PRR26Q8N8Z3 221 aa6.88□□□□□ -1.31
LINC01940-201ENST00000455228 K7EQG2 157 aa6.88□□□□□ -1.31
LINC01940-201ENST00000455228 CIRBPQ14011 172 aaKnown RBP6.88□□□□□ -1.31
LINC01940-201ENST00000455228 NACAE9PAV3 2078 aa6.87□□□□□ -1.31
LINC01940-201ENST00000455228 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.87□□□□□ -1.31
LINC01940-201ENST00000455228 IGKV2-29A2NJV5 120 aaPredicted RBP6.87□□□□□ -1.31
LINC01940-201ENST00000455228 RBM3P98179 157 aaKnown RBP6.87□□□□□ -1.31
LINC01940-201ENST00000455228 C10orf99Q6UWK7 81 aa6.87□□□□□ -1.31
LINC01940-201ENST00000455228 OVOL2Q9BRP0 275 aa6.87□□□□□ -1.31
LINC01940-201ENST00000455228 IGKV3D-7A0A0C4DH55 119 aa6.86□□□□□ -1.31
LINC01940-201ENST00000455228 IGHV3-38A0A0C4DH36 116 aa6.86□□□□□ -1.31
LINC01940-201ENST00000455228 NOTCH3Q9UM47 2321 aa6.86□□□□□ -1.31
LINC01940-201ENST00000455228 CCL19Q99731 98 aa6.86□□□□□ -1.31
LINC01940-201ENST00000455228 A6NN06 94 aa6.85□□□□□ -1.31
LINC01940-201ENST00000455228 C19orf84I3L1E1 186 aa6.85□□□□□ -1.31
LINC01940-201ENST00000455228 MSMBP08118 114 aa6.85□□□□□ -1.31
LINC01940-201ENST00000455228 CHD6Q8TD26 2715 aa6.85□□□□□ -1.31
LINC01940-201ENST00000455228 DAD1P61803 113 aa6.85□□□□□ -1.31
LINC01940-201ENST00000455228 ZNF625Q96I27 306 aaPredicted RBP6.85□□□□□ -1.31
LINC01940-201ENST00000455228 PRM2P04554 102 aa6.85□□□□□ -1.31
LINC01940-201ENST00000455228 Q6ZRP5 223 aa6.85□□□□□ -1.31
LINC01940-201ENST00000455228 LRRK2Q5S007 2527 aa6.84□□□□□ -1.31
LINC01940-201ENST00000455228 DEFB131AP59861 70 aa6.84□□□□□ -1.31
LINC01940-201ENST00000455228 CDKN2A-AS1Q9UH64 79 aa6.84□□□□□ -1.31
LINC01940-201ENST00000455228 hDV103S1A0JD37 113 aa6.84□□□□□ -1.31
LINC01940-201ENST00000455228 DNAL4O96015 105 aa6.84□□□□□ -1.31
LINC01940-201ENST00000455228 IGHV4-59P01825 116 aa6.84□□□□□ -1.31
LINC01940-201ENST00000455228 CCL24O00175 119 aa6.84□□□□□ -1.32
LINC01940-201ENST00000455228 RMI2Q96E14 147 aa6.84□□□□□ -1.32
LINC01940-201ENST00000455228 LINC00467Q9BRT7 94 aa6.84□□□□□ -1.32
LINC01940-201ENST00000455228 ZNF462Q96JM2 2506 aa6.83□□□□□ -1.32
LINC01940-201ENST00000455228 IGHV4-30-2A0A087WSY4 118 aa6.83□□□□□ -1.32
LINC01940-201ENST00000455228 VPREB1P12018 145 aa6.83□□□□□ -1.32
LINC01940-201ENST00000455228 FAM104AQ969W3 186 aa6.83□□□□□ -1.32
LINC01940-201ENST00000455228 CHCHD7Q9BUK0 85 aa6.83□□□□□ -1.32
LINC01940-201ENST00000455228 C2CD3Q4AC94 2353 aa6.83□□□□□ -1.32
LINC01940-201ENST00000455228 LINC00167Q96N53 147 aa6.82□□□□□ -1.32
LINC01940-201ENST00000455228 Q9H8V8 135 aa6.82□□□□□ -1.32
LINC01940-201ENST00000455228 Q6ZSN1 163 aa6.82□□□□□ -1.32
LINC01940-201ENST00000455228 DYNLRB2Q8TF09 96 aa6.82□□□□□ -1.32
LINC01940-201ENST00000455228 B4DSR2 109 aa6.81□□□□□ -1.32
LINC01940-201ENST00000455228 UBE2BP63146 152 aa6.81□□□□□ -1.32
LINC01940-201ENST00000455228 FAM218AQ96MZ4 157 aa6.81□□□□□ -1.32
LINC01940-201ENST00000455228 USP9YO00507 2555 aaPredicted RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms