RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 SPART-AS1P0CW21 52 aa9.6□□□□□ -0.87
CLK3-203ENST00000454830 MUSTN1Q8IVN3 82 aa9.6□□□□□ -0.87
CLK3-203ENST00000454830 GTSF1LQ9H1H1 148 aa9.6□□□□□ -0.87
CLK3-203ENST00000454830 ATP5G1P05496 136 aa9.6□□□□□ -0.87
CLK3-203ENST00000454830 A4D1N5 150 aa9.59□□□□□ -0.87
CLK3-203ENST00000454830 SCGB1C2P0DMR2 95 aa9.59□□□□□ -0.87
CLK3-203ENST00000454830 Q9H8V8 135 aa9.59□□□□□ -0.87
CLK3-203ENST00000454830 MTURNQ8N3F0 131 aa9.59□□□□□ -0.87
CLK3-203ENST00000454830 IGHV3-30P01768 117 aa9.59□□□□□ -0.87
CLK3-203ENST00000454830 IGHV3-30-5P0DP03 117 aa9.59□□□□□ -0.87
CLK3-203ENST00000454830 TIRAPP58753 221 aa9.59□□□□□ -0.87
CLK3-203ENST00000454830 MIFP14174 115 aa9.58□□□□□ -0.88
CLK3-203ENST00000454830 PSMB2P49721 201 aa9.58□□□□□ -0.88
CLK3-203ENST00000454830 PRIMA1Q86XR5 153 aa9.58□□□□□ -0.88
CLK3-203ENST00000454830 SBSPONQ8IVN8 264 aa9.58□□□□□ -0.88
CLK3-203ENST00000454830 CYSRT1A8MQ03 144 aa9.58□□□□□ -0.88
CLK3-203ENST00000454830 RPL24P83731 157 aaKnown RBP9.58□□□□□ -0.88
CLK3-203ENST00000454830 C5orf38Q86SI9 138 aa9.58□□□□□ -0.88
CLK3-203ENST00000454830 C11orf68Q9H3H3 251 aaKnown RBP9.58□□□□□ -0.88
CLK3-203ENST00000454830 RNF151Q2KHN1 245 aa9.58□□□□□ -0.88
CLK3-203ENST00000454830 CIRBPQ14011 172 aaKnown RBP9.57□□□□□ -0.88
CLK3-203ENST00000454830 SHISA2Q6UWI4 295 aa9.57□□□□□ -0.88
CLK3-203ENST00000454830 CSDC2Q9Y534 153 aaKnown RBP9.57□□□□□ -0.88
CLK3-203ENST00000454830 PRB2P02812 416 aaPredicted RBP9.57□□□□□ -0.88
CLK3-203ENST00000454830 XCL1P47992 114 aa9.56□□□□□ -0.88
CLK3-203ENST00000454830 RNF183Q96D59 192 aa9.56□□□□□ -0.88
CLK3-203ENST00000454830 SPANXB1Q9NS25 103 aaPredicted RBP9.56□□□□□ -0.88
CLK3-203ENST00000454830 FBN1P35555 2871 aaKnown RBP9.56□□□□□ -0.88
CLK3-203ENST00000454830 KRTAP10-11P60412 298 aa9.56□□□□□ -0.88
CLK3-203ENST00000454830 Q8NAQ8 132 aa9.55□□□□□ -0.88
CLK3-203ENST00000454830 PKD1L1Q8TDX9 2849 aa9.55□□□□□ -0.88
CLK3-203ENST00000454830 H3BMG7 143 aa9.55□□□□□ -0.88
CLK3-203ENST00000454830 MGAM2Q2M2H8 2515 aa9.55□□□□□ -0.88
CLK3-203ENST00000454830 CFC1BP0CG36 223 aa9.54□□□□□ -0.88
CLK3-203ENST00000454830 CFC1P0CG37 223 aa9.54□□□□□ -0.88
CLK3-203ENST00000454830 ADAMTSL4-AS1Q5T5F5 129 aa9.54□□□□□ -0.88
CLK3-203ENST00000454830 ZFAND6Q6FIF0 208 aa9.54□□□□□ -0.88
CLK3-203ENST00000454830 RBX1P62877 108 aa9.54□□□□□ -0.88
CLK3-203ENST00000454830 LINC00612Q8N6U2 182 aa9.54□□□□□ -0.88
CLK3-203ENST00000454830 IGLV10-54A0A075B6I4 117 aa9.54□□□□□ -0.88
CLK3-203ENST00000454830 SMIM1B2RUZ4 78 aa9.54□□□□□ -0.88
CLK3-203ENST00000454830 ANGP03950 147 aaKnown RBP9.54□□□□□ -0.88
CLK3-203ENST00000454830 PRO1854Q9UHT4 67 aa9.54□□□□□ -0.88
CLK3-203ENST00000454830 G3V4G9 280 aa9.53□□□□□ -0.88
CLK3-203ENST00000454830 H7C423 109 aa9.53□□□□□ -0.88
CLK3-203ENST00000454830 TSPAN13O95857 204 aa9.53□□□□□ -0.88
CLK3-203ENST00000454830 ERG28Q9UKR5 140 aa9.52□□□□□ -0.89
CLK3-203ENST00000454830 SS18Q15532 418 aa9.52□□□□□ -0.89
CLK3-203ENST00000454830 MRPL23Q16540 153 aaKnown RBP9.51□□□□□ -0.89
CLK3-203ENST00000454830 IGLV5-45A0A087WSX0 123 aa9.51□□□□□ -0.89
CLK3-203ENST00000454830 DEFB121Q5J5C9 76 aa9.51□□□□□ -0.89
CLK3-203ENST00000454830 Q8N3U1 123 aa9.51□□□□□ -0.89
CLK3-203ENST00000454830 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.51□□□□□ -0.89
CLK3-203ENST00000454830 LINC00269Q8N2A0 174 aa9.51□□□□□ -0.89
CLK3-203ENST00000454830 MRAPQ8TCY5 172 aa9.51□□□□□ -0.89
CLK3-203ENST00000454830 A0A1B0GWB2 263 aa9.5□□□□□ -0.89
CLK3-203ENST00000454830 NDUFA1O15239 70 aa9.5□□□□□ -0.89
CLK3-203ENST00000454830 ICOSQ9Y6W8 199 aa9.5□□□□□ -0.89
CLK3-203ENST00000454830 LINC00959A0A1B0GUT2 108 aa9.49□□□□□ -0.89
CLK3-203ENST00000454830 MIAQ16674 131 aa9.49□□□□□ -0.89
CLK3-203ENST00000454830 C6orf226Q5I0X4 101 aa9.49□□□□□ -0.89
CLK3-203ENST00000454830 LYRM7Q5U5X0 104 aa9.49□□□□□ -0.89
CLK3-203ENST00000454830 COX7B2Q8TF08 81 aa9.49□□□□□ -0.89
CLK3-203ENST00000454830 LINC00158P58513 81 aa9.48□□□□□ -0.89
CLK3-203ENST00000454830 IGLV5-39A0A0G2JS06 123 aa9.48□□□□□ -0.89
CLK3-203ENST00000454830 PFN2P35080 140 aa9.48□□□□□ -0.89
CLK3-203ENST00000454830 WIPF1O43516 503 aa9.48□□□□□ -0.89
CLK3-203ENST00000454830 LITAFQ99732 161 aa9.47□□□□□ -0.89
CLK3-203ENST00000454830 VPS25Q9BRG1 176 aa9.47□□□□□ -0.89
CLK3-203ENST00000454830 MALP21145 153 aa9.46□□□□□ -0.89
CLK3-203ENST00000454830 WFDC2Q14508 124 aa9.46□□□□□ -0.89
CLK3-203ENST00000454830 OCIAD2Q56VL3 154 aa9.46□□□□□ -0.89
CLK3-203ENST00000454830 EIF4EBP3O60516 100 aaPredicted RBP9.46□□□□□ -0.9
CLK3-203ENST00000454830 IGHV3-33P01772 117 aa9.46□□□□□ -0.9
CLK3-203ENST00000454830 Q6ZTC4 211 aa9.46□□□□□ -0.9
CLK3-203ENST00000454830 KLK12Q9UKR0 248 aa9.45□□□□□ -0.9
CLK3-203ENST00000454830 NBEAL1Q6ZS30 2694 aa9.45□□□□□ -0.9
CLK3-203ENST00000454830 K7ERU9 68 aa9.45□□□□□ -0.9
CLK3-203ENST00000454830 PCP4P48539 62 aa9.45□□□□□ -0.9
CLK3-203ENST00000454830 SPANXDQ9BXN6 97 aa9.45□□□□□ -0.9
CLK3-203ENST00000454830 SPANXCQ9NY87 97 aa9.45□□□□□ -0.9
CLK3-203ENST00000454830 IGHV3OR16-9A0A0B4J2B5 98 aa9.45□□□□□ -0.9
CLK3-203ENST00000454830 A0A0J9YWU9 116 aa9.45□□□□□ -0.9
CLK3-203ENST00000454830 REG3AQ06141 175 aa9.45□□□□□ -0.9
CLK3-203ENST00000454830 ETDBQ3ZM63 59 aa9.45□□□□□ -0.9
CLK3-203ENST00000454830 TENM3Q9P273 2699 aa9.44□□□□□ -0.9
CLK3-203ENST00000454830 RPL13AP40429 203 aaKnown RBP9.44□□□□□ -0.9
CLK3-203ENST00000454830 NANOS2P60321 138 aaKnown RBP9.44□□□□□ -0.9
CLK3-203ENST00000454830 LINC00308Q8TCZ7 52 aa9.44□□□□□ -0.9
CLK3-203ENST00000454830 CBY1Q9Y3M2 126 aa9.44□□□□□ -0.9
CLK3-203ENST00000454830 A0A0B4J2C4 111 aa9.43□□□□□ -0.9
CLK3-203ENST00000454830 HERV-K104P63124 156 aa9.43□□□□□ -0.9
CLK3-203ENST00000454830 SH2D6Q7Z4S9 175 aa9.43□□□□□ -0.9
CLK3-203ENST00000454830 A0A1B0GUV1 79 aa9.43□□□□□ -0.9
CLK3-203ENST00000454830 TEX48A0A1B0GUV7 120 aa9.43□□□□□ -0.9
CLK3-203ENST00000454830 CHCHD10Q8WYQ3 142 aaPredicted RBP9.43□□□□□ -0.9
CLK3-203ENST00000454830 TCL1BO95988 128 aa9.43□□□□□ -0.9
CLK3-203ENST00000454830 IFITM1P13164 125 aa9.43□□□□□ -0.9
CLK3-203ENST00000454830 CKS1BP61024 79 aa9.43□□□□□ -0.9
CLK3-203ENST00000454830 KPRPQ5T749 579 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms