RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 RS1O15537 224 aa8.6□□□□□ -1.03
SMPD4-213ENST00000454468 RNASE1P07998 156 aaKnown RBP8.6□□□□□ -1.03
SMPD4-213ENST00000454468 XCL1P47992 114 aa8.6□□□□□ -1.03
SMPD4-213ENST00000454468 GYPEP15421 78 aa8.6□□□□□ -1.03
SMPD4-213ENST00000454468 VSIG2Q96IQ7 327 aa8.6□□□□□ -1.03
SMPD4-213ENST00000454468 ADAMTSL4-AS1Q5T5F5 129 aa8.59□□□□□ -1.03
SMPD4-213ENST00000454468 RPL13AP40429 203 aaKnown RBP8.58□□□□□ -1.04
SMPD4-213ENST00000454468 C5orf47Q569G3 176 aa8.58□□□□□ -1.04
SMPD4-213ENST00000454468 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.58□□□□□ -1.04
SMPD4-213ENST00000454468 HILS1P60008 231 aa8.58□□□□□ -1.04
SMPD4-213ENST00000454468 CLEC2BQ92478 149 aa8.58□□□□□ -1.04
SMPD4-213ENST00000454468 C16orf74Q96GX8 76 aa8.58□□□□□ -1.04
SMPD4-213ENST00000454468 TRAV4A0A0B4J268 109 aa8.58□□□□□ -1.04
SMPD4-213ENST00000454468 DNAJC30Q96LL9 226 aa8.58□□□□□ -1.04
SMPD4-213ENST00000454468 F5H768 121 aa8.57□□□□□ -1.04
SMPD4-213ENST00000454468 HIVEP1P15822 2718 aa8.57□□□□□ -1.04
SMPD4-213ENST00000454468 HERVK_113P63121 156 aa8.57□□□□□ -1.04
SMPD4-213ENST00000454468 VWFP04275 2813 aa8.56□□□□□ -1.04
SMPD4-213ENST00000454468 C9orf153Q5TBE3 101 aa8.56□□□□□ -1.04
SMPD4-213ENST00000454468 IGLV1-51P01701 117 aa8.56□□□□□ -1.04
SMPD4-213ENST00000454468 CMC4P56277 68 aaPredicted RBP8.56□□□□□ -1.04
SMPD4-213ENST00000454468 C6orf226Q5I0X4 101 aa8.56□□□□□ -1.04
SMPD4-213ENST00000454468 TEN1Q86WV5 123 aa8.56□□□□□ -1.04
SMPD4-213ENST00000454468 C15orf53Q8NAA6 179 aa8.56□□□□□ -1.04
SMPD4-213ENST00000454468 NBEAL1Q6ZS30 2694 aa8.56□□□□□ -1.04
SMPD4-213ENST00000454468 SLC25A20O43772 301 aa8.56□□□□□ -1.04
SMPD4-213ENST00000454468 MRPS36P82909 103 aaKnown RBP8.56□□□□□ -1.04
SMPD4-213ENST00000454468 DAZ2Q13117 558 aaKnown RBP8.56□□□□□ -1.04
SMPD4-213ENST00000454468 FHL3Q13643 280 aa8.56□□□□□ -1.04
SMPD4-213ENST00000454468 NTM-AS1Q6ZSK4 140 aa8.56□□□□□ -1.04
SMPD4-213ENST00000454468 DAZ4Q86SG3 579 aaKnown RBP8.56□□□□□ -1.04
SMPD4-213ENST00000454468 ANKRD29Q8N6D5 301 aa8.56□□□□□ -1.04
SMPD4-213ENST00000454468 DAZ3Q9NR90 486 aaKnown RBP8.56□□□□□ -1.04
SMPD4-213ENST00000454468 MGAM2Q2M2H8 2515 aa8.55□□□□□ -1.04
SMPD4-213ENST00000454468 TINCRA0A1B0GVN0 87 aa8.55□□□□□ -1.04
SMPD4-213ENST00000454468 PIK3CD-AS1Q5SR53 167 aa8.55□□□□□ -1.04
SMPD4-213ENST00000454468 PYGO1Q9Y3Y4 419 aa8.55□□□□□ -1.04
SMPD4-213ENST00000454468 LOC107984640A0A0U1RRK4 108 aa8.55□□□□□ -1.04
SMPD4-213ENST00000454468 UBE2D1P51668 147 aa8.55□□□□□ -1.04
SMPD4-213ENST00000454468 NTN5Q8WTR8 489 aaPredicted RBP8.55□□□□□ -1.04
SMPD4-213ENST00000454468 LINC00242Q5T6M2 205 aa8.55□□□□□ -1.04
SMPD4-213ENST00000454468 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.55□□□□□ -1.04
SMPD4-213ENST00000454468 TRAV8-4A0A0B4J246 113 aa8.54□□□□□ -1.04
SMPD4-213ENST00000454468 PAX4O43316 350 aa8.54□□□□□ -1.04
SMPD4-213ENST00000454468 FAM222AQ5U5X8 452 aa8.54□□□□□ -1.04
SMPD4-213ENST00000454468 C2orf82Q6UX34 121 aa8.54□□□□□ -1.04
SMPD4-213ENST00000454468 IGHV3-33P01772 117 aa8.54□□□□□ -1.04
SMPD4-213ENST00000454468 AMELXQ99217 191 aa8.54□□□□□ -1.04
SMPD4-213ENST00000454468 COL6A5A8TX70 2615 aa8.53□□□□□ -1.04
SMPD4-213ENST00000454468 OTOGQ6ZRI0 2925 aa8.53□□□□□ -1.04
SMPD4-213ENST00000454468 DAD1P61803 113 aa8.53□□□□□ -1.04
SMPD4-213ENST00000454468 KRTAP1-1Q07627 177 aa8.53□□□□□ -1.04
SMPD4-213ENST00000454468 SPATA3Q8NHX4 192 aa8.53□□□□□ -1.04
SMPD4-213ENST00000454468 EDA2RQ9HAV5 297 aa8.53□□□□□ -1.04
SMPD4-213ENST00000454468 CSDC2Q9Y534 153 aaKnown RBP8.53□□□□□ -1.04
SMPD4-213ENST00000454468 BEAN1Q3B7T3 259 aa8.53□□□□□ -1.04
SMPD4-213ENST00000454468 IGLV4-60A0A075B6I1 120 aa8.53□□□□□ -1.04
SMPD4-213ENST00000454468 ATP6V0E2Q8NHE4 81 aa8.53□□□□□ -1.04
SMPD4-213ENST00000454468 NSD1Q96L73 2696 aaPredicted RBP8.53□□□□□ -1.04
SMPD4-213ENST00000454468 EIF4EBP3O60516 100 aaPredicted RBP8.52□□□□□ -1.04
SMPD4-213ENST00000454468 ANGP03950 147 aaKnown RBP8.52□□□□□ -1.04
SMPD4-213ENST00000454468 TENM1Q9UKZ4 2725 aa8.52□□□□□ -1.04
SMPD4-213ENST00000454468 TRIAP1O43715 76 aa8.52□□□□□ -1.05
SMPD4-213ENST00000454468 ATXN8Q156A1 80 aa8.52□□□□□ -1.05
SMPD4-213ENST00000454468 TRBV10-1A0A0K0K1A3 114 aa8.52□□□□□ -1.05
SMPD4-213ENST00000454468 NHLRC4P0CG21 123 aaPredicted RBP8.52□□□□□ -1.05
SMPD4-213ENST00000454468 UBE2D3P61077 147 aa8.52□□□□□ -1.05
SMPD4-213ENST00000454468 UBE2D2P62837 147 aa8.52□□□□□ -1.05
SMPD4-213ENST00000454468 MALP21145 153 aa8.51□□□□□ -1.05
SMPD4-213ENST00000454468 ICOSQ9Y6W8 199 aa8.51□□□□□ -1.05
SMPD4-213ENST00000454468 MIAQ16674 131 aa8.51□□□□□ -1.05
SMPD4-213ENST00000454468 CARD19Q96LW7 228 aa8.51□□□□□ -1.05
SMPD4-213ENST00000454468 GIG44P09565 113 aaPredicted RBP8.5□□□□□ -1.05
SMPD4-213ENST00000454468 CDC42SE2Q9NRR3 84 aa8.5□□□□□ -1.05
SMPD4-213ENST00000454468 SMIM9A6NGZ8 99 aa8.5□□□□□ -1.05
SMPD4-213ENST00000454468 PRO0461Q9UI25 63 aa8.5□□□□□ -1.05
SMPD4-213ENST00000454468 KRTAP10-3P60369 221 aa8.5□□□□□ -1.05
SMPD4-213ENST00000454468 MIR7-3HGQ8N6C7 128 aa8.5□□□□□ -1.05
SMPD4-213ENST00000454468 SMCPP49901 116 aaPredicted RBP8.49□□□□□ -1.05
SMPD4-213ENST00000454468 LINC00526Q96FQ7 95 aa8.49□□□□□ -1.05
SMPD4-213ENST00000454468 TRBV6-8A0A0A6YYG3 113 aa8.48□□□□□ -1.05
SMPD4-213ENST00000454468 LINC01620Q4KN68 170 aa8.48□□□□□ -1.05
SMPD4-213ENST00000454468 TEX49A0A1B0GTD5 131 aa8.48□□□□□ -1.05
SMPD4-213ENST00000454468 PDZD2O15018 2839 aa8.48□□□□□ -1.05
SMPD4-213ENST00000454468 KLK5Q9Y337 293 aaPredicted RBP8.48□□□□□ -1.05
SMPD4-213ENST00000454468 SMIM1B2RUZ4 78 aa8.47□□□□□ -1.05
SMPD4-213ENST00000454468 CRPP02741 224 aa8.47□□□□□ -1.05
SMPD4-213ENST00000454468 FHL2Q14192 279 aa8.47□□□□□ -1.05
SMPD4-213ENST00000454468 OXLD1Q5BKU9 147 aa8.47□□□□□ -1.05
SMPD4-213ENST00000454468 LINC00308Q8TCZ7 52 aa8.47□□□□□ -1.05
SMPD4-213ENST00000454468 SS18Q15532 418 aa8.47□□□□□ -1.05
SMPD4-213ENST00000454468 C9orf66Q5T8R8 295 aa8.47□□□□□ -1.05
SMPD4-213ENST00000454468 COX7B2Q8TF08 81 aa8.47□□□□□ -1.05
SMPD4-213ENST00000454468 TMEM126AQ9H061 195 aa8.47□□□□□ -1.05
SMPD4-213ENST00000454468 LINC00269Q8N2A0 174 aa8.47□□□□□ -1.05
SMPD4-213ENST00000454468 FAM104AQ969W3 186 aa8.47□□□□□ -1.05
SMPD4-213ENST00000454468 Q8N3U1 123 aa8.46□□□□□ -1.05
SMPD4-213ENST00000454468 FAM236AA0A1B0GUQ0 79 aa8.46□□□□□ -1.06
SMPD4-213ENST00000454468 FAM236BA0A1B0GV22 79 aa8.46□□□□□ -1.06
SMPD4-213ENST00000454468 TRBV6-4A0A1B0GX49 114 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms