RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 DPY30Q9C005 99 aa0.62□□□□□ -2.31
HMGN3P1-201ENST00000453847 PDCD11Q14690 1871 aaKnown RBP0.62□□□□□ -2.31
HMGN3P1-201ENST00000453847 MARF1Q9Y4F3 1742 aaKnown RBP0.61□□□□□ -2.31
HMGN3P1-201ENST00000453847 TNCP24821 2201 aa0.61□□□□□ -2.31
HMGN3P1-201ENST00000453847 UBA52P62987 128 aaKnown RBP0.61□□□□□ -2.31
HMGN3P1-201ENST00000453847 COL5A1-AS1Q5SY13 56 aa0.61□□□□□ -2.31
HMGN3P1-201ENST00000453847 SMARCA2P51531 1590 aa0.61□□□□□ -2.31
HMGN3P1-201ENST00000453847 ARHGEF12Q9NZN5 1544 aa0.6□□□□□ -2.31
HMGN3P1-201ENST00000453847 LCN9Q8WX39 176 aa0.6□□□□□ -2.31
HMGN3P1-201ENST00000453847 CACFD1Q9UGQ2 172 aa0.6□□□□□ -2.31
HMGN3P1-201ENST00000453847 AP4S1Q9Y587 144 aa0.6□□□□□ -2.31
HMGN3P1-201ENST00000453847 TROQ12816 1431 aaPredicted RBP0.6□□□□□ -2.31
HMGN3P1-201ENST00000453847 NRXN1Q9ULB1 1477 aa0.6□□□□□ -2.31
HMGN3P1-201ENST00000453847 BIVM-ERCC5R4GMW8 1640 aa0.6□□□□□ -2.31
HMGN3P1-201ENST00000453847 MON2Q7Z3U7 1717 aa0.59□□□□□ -2.31
HMGN3P1-201ENST00000453847 TTC37Q6PGP7 1564 aa0.59□□□□□ -2.31
HMGN3P1-201ENST00000453847 I3L2K1 104 aa0.59□□□□□ -2.31
HMGN3P1-201ENST00000453847 SAA2P0DJI9 122 aaPredicted RBP0.59□□□□□ -2.31
HMGN3P1-201ENST00000453847 ASIPP42127 132 aa0.59□□□□□ -2.31
HMGN3P1-201ENST00000453847 C10orf113Q5VZT2 155 aa0.59□□□□□ -2.31
HMGN3P1-201ENST00000453847 CNFNQ9BYD5 112 aa0.59□□□□□ -2.31
HMGN3P1-201ENST00000453847 FAIMQ9NVQ4 179 aa0.59□□□□□ -2.31
HMGN3P1-201ENST00000453847 ATOX1O00244 68 aa0.58□□□□□ -2.32
HMGN3P1-201ENST00000453847 TMEM263Q8WUH6 116 aaKnown RBP0.58□□□□□ -2.32
HMGN3P1-201ENST00000453847 C1orf167Q5SNV9 1468 aa0.58□□□□□ -2.32
HMGN3P1-201ENST00000453847 PIEZO1Q92508 2521 aa0.58□□□□□ -2.32
HMGN3P1-201ENST00000453847 PAPPAQ13219 1627 aa0.57□□□□□ -2.32
HMGN3P1-201ENST00000453847 PLEKHH2Q8IVE3 1493 aa0.57□□□□□ -2.32
HMGN3P1-201ENST00000453847 NDUFC1O43677 76 aa0.57□□□□□ -2.32
HMGN3P1-201ENST00000453847 LINC00032P0C843 101 aa0.57□□□□□ -2.32
HMGN3P1-201ENST00000453847 KRTAP21-1Q3LI58 79 aa0.57□□□□□ -2.32
HMGN3P1-201ENST00000453847 SERP2Q8N6R1 65 aa0.57□□□□□ -2.32
HMGN3P1-201ENST00000453847 VAMP8Q9BV40 100 aa0.57□□□□□ -2.32
HMGN3P1-201ENST00000453847 PRO0255Q9UI72 69 aa0.57□□□□□ -2.32
HMGN3P1-201ENST00000453847 ABCA12Q86UK0 2595 aa0.57□□□□□ -2.32
HMGN3P1-201ENST00000453847 TRBV7-7A0A0K0K1E9 115 aa0.56□□□□□ -2.32
HMGN3P1-201ENST00000453847 SPINK6Q6UWN8 80 aa0.56□□□□□ -2.32
HMGN3P1-201ENST00000453847 XRN1Q8IZH2 1706 aaKnown RBP0.55□□□□□ -2.32
HMGN3P1-201ENST00000453847 CACNA1EQ15878 2313 aa0.55□□□□□ -2.32
HMGN3P1-201ENST00000453847 NLRP1Q9C000 1473 aa0.55□□□□□ -2.32
HMGN3P1-201ENST00000453847 PAPPA2Q9BXP8 1791 aa0.55□□□□□ -2.32
HMGN3P1-201ENST00000453847 TULP4Q9NRJ4 1543 aa0.55□□□□□ -2.32
HMGN3P1-201ENST00000453847 TRBV25-1A0A075B6N4 114 aa0.55□□□□□ -2.32
HMGN3P1-201ENST00000453847 A0A087WVE0 104 aa0.55□□□□□ -2.32
HMGN3P1-201ENST00000453847 A0A1B0GWA3 101 aa0.55□□□□□ -2.32
HMGN3P1-201ENST00000453847 FDCSPQ8NFU4 85 aa0.55□□□□□ -2.32
HMGN3P1-201ENST00000453847 LINC01600Q96MT4 127 aa0.55□□□□□ -2.32
HMGN3P1-201ENST00000453847 TRGV9Q99603 122 aa0.55□□□□□ -2.32
HMGN3P1-201ENST00000453847 CELSR2Q9HCU4 2923 aa0.54□□□□□ -2.32
HMGN3P1-201ENST00000453847 TENM3Q9P273 2699 aa0.54□□□□□ -2.32
HMGN3P1-201ENST00000453847 NHSL1Q5SYE7 1610 aa0.54□□□□□ -2.32
HMGN3P1-201ENST00000453847 CLTCQ00610 1675 aaKnown RBP0.54□□□□□ -2.32
HMGN3P1-201ENST00000453847 A0A0D9SFI3 127 aa0.54□□□□□ -2.32
HMGN3P1-201ENST00000453847 SYS1-DBNDD2H3BUS1 97 aa0.54□□□□□ -2.32
HMGN3P1-201ENST00000453847 TP53AIP1Q9HCN2 124 aa0.54□□□□□ -2.32
HMGN3P1-201ENST00000453847 F8P00451 2351 aa0.54□□□□□ -2.32
HMGN3P1-201ENST00000453847 TPRP12270 2363 aaKnown RBP0.54□□□□□ -2.32
HMGN3P1-201ENST00000453847 RAPGEF2Q9Y4G8 1499 aa0.54□□□□□ -2.32
HMGN3P1-201ENST00000453847 KNDC1Q76NI1 1749 aa0.53□□□□□ -2.32
HMGN3P1-201ENST00000453847 LINC00846Q9NV44 126 aa0.52□□□□□ -2.33
HMGN3P1-201ENST00000453847 TARBP1Q13395 1621 aaKnown RBP0.52□□□□□ -2.33
HMGN3P1-201ENST00000453847 SHPRHQ149N8 1683 aa0.52□□□□□ -2.33
HMGN3P1-201ENST00000453847 UBR1Q8IWV7 1749 aa0.52□□□□□ -2.33
HMGN3P1-201ENST00000453847 C7orf77A4D0Y5 90 aa0.51□□□□□ -2.33
HMGN3P1-201ENST00000453847 FAUP35544 74 aaKnown RBP0.51□□□□□ -2.33
HMGN3P1-201ENST00000453847 PMCHL1Q16048 86 aa0.51□□□□□ -2.33
HMGN3P1-201ENST00000453847 PSMG4Q5JS54 123 aa0.51□□□□□ -2.33
HMGN3P1-201ENST00000453847 AHCTF1Q8WYP5 2266 aa0.51□□□□□ -2.33
HMGN3P1-201ENST00000453847 SPCS1Q9Y6A9 102 aa0.51□□□□□ -2.33
HMGN3P1-201ENST00000453847 AHNAK2Q8IVF2 5795 aa0.51□□□□□ -2.33
HMGN3P1-201ENST00000453847 KIAA1551Q9HCM1 1747 aa0.5□□□□□ -2.33
HMGN3P1-201ENST00000453847 TRBV6-1A0A0K0K1D8 114 aa0.5□□□□□ -2.33
HMGN3P1-201ENST00000453847 LINC00959A0A1B0GUT2 108 aa0.5□□□□□ -2.33
HMGN3P1-201ENST00000453847 UQCRHP07919 91 aa0.5□□□□□ -2.33
HMGN3P1-201ENST00000453847 C20orf78Q9BR46 151 aa0.49□□□□□ -2.33
HMGN3P1-201ENST00000453847 PRO1933Q9H354 126 aa0.49□□□□□ -2.33
HMGN3P1-201ENST00000453847 CHD9Q3L8U1 2897 aa0.49□□□□□ -2.33
HMGN3P1-201ENST00000453847 BAZ1AQ9NRL2 1556 aaPredicted RBP0.49□□□□□ -2.33
HMGN3P1-201ENST00000453847 FANCAO15360 1455 aa0.48□□□□□ -2.33
HMGN3P1-201ENST00000453847 C2CD3Q4AC94 2353 aa0.48□□□□□ -2.33
HMGN3P1-201ENST00000453847 Q8IZM0 81 aa0.48□□□□□ -2.33
HMGN3P1-201ENST00000453847 MYO3AQ8NEV4 1616 aa0.48□□□□□ -2.33
HMGN3P1-201ENST00000453847 PLCE1Q9P212 2302 aa0.48□□□□□ -2.33
HMGN3P1-201ENST00000453847 EPRSP07814 1512 aaKnown RBP0.48□□□□□ -2.33
HMGN3P1-201ENST00000453847 RGPD4Q7Z3J3 1758 aa0.47□□□□□ -2.33
HMGN3P1-201ENST00000453847 HIGD1BQ9P298 99 aa0.47□□□□□ -2.33
HMGN3P1-201ENST00000453847 POLA1P09884 1462 aaPredicted RBP0.47□□□□□ -2.33
HMGN3P1-201ENST00000453847 A0A0G2JMZ2 1700 aa0.47□□□□□ -2.33
HMGN3P1-201ENST00000453847 CEP162Q5TB80 1403 aa0.47□□□□□ -2.33
HMGN3P1-201ENST00000453847 DNAJC13O75165 2243 aa0.46□□□□□ -2.34
HMGN3P1-201ENST00000453847 LRP1Q07954 4544 aaKnown RBP0.46□□□□□ -2.34
HMGN3P1-201ENST00000453847 SPTBN2O15020 2390 aa0.46□□□□□ -2.34
HMGN3P1-201ENST00000453847 S100A3P33764 101 aa0.46□□□□□ -2.34
HMGN3P1-201ENST00000453847 Q5BKY6 102 aa0.46□□□□□ -2.34
HMGN3P1-201ENST00000453847 DEFB107AQ8IZN7 70 aa0.46□□□□□ -2.34
HMGN3P1-201ENST00000453847 SYNE1Q8NF91 8797 aaKnown RBP0.46□□□□□ -2.34
HMGN3P1-201ENST00000453847 UQCRHLA0A096LP55 91 aa0.45□□□□□ -2.34
HMGN3P1-201ENST00000453847 PHGR1C9JFL3 82 aa0.45□□□□□ -2.34
HMGN3P1-201ENST00000453847 DEFB123Q8N688 67 aa0.45□□□□□ -2.34
HMGN3P1-201ENST00000453847 PSENENQ9NZ42 101 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms