RNA–Protein interactions for RNA: ENST00000447439.6

KLHL3-202, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-202ENST00000447439 UBE2L6O14933 153 aa6.67□□□□□ -1.34
KLHL3-202ENST00000447439 DEFB130BP0DP73 79 aa6.67□□□□□ -1.34
KLHL3-202ENST00000447439 DEFB130AP0DP74 79 aa6.67□□□□□ -1.34
KLHL3-202ENST00000447439 HERVK_113P63121 156 aa6.67□□□□□ -1.34
KLHL3-202ENST00000447439 IGLV4-60A0A075B6I1 120 aa6.67□□□□□ -1.34
KLHL3-202ENST00000447439 TRGV4A0A0C4DH28 118 aa6.67□□□□□ -1.34
KLHL3-202ENST00000447439 CRLF1O75462 422 aa6.67□□□□□ -1.34
KLHL3-202ENST00000447439 CKS1BP61024 79 aa6.67□□□□□ -1.34
KLHL3-202ENST00000447439 C19orf73Q9NVV2 129 aa6.67□□□□□ -1.34
KLHL3-202ENST00000447439 IGLV5-39A0A0G2JS06 123 aa6.66□□□□□ -1.34
KLHL3-202ENST00000447439 F5H768 121 aa6.66□□□□□ -1.34
KLHL3-202ENST00000447439 TIMM17BO60830 172 aa6.66□□□□□ -1.34
KLHL3-202ENST00000447439 DAZ2Q13117 558 aaKnown RBP6.66□□□□□ -1.34
KLHL3-202ENST00000447439 DAZ4Q86SG3 579 aaKnown RBP6.66□□□□□ -1.34
KLHL3-202ENST00000447439 SPATA3Q8NHX4 192 aa6.66□□□□□ -1.34
KLHL3-202ENST00000447439 RNF183Q96D59 192 aa6.66□□□□□ -1.34
KLHL3-202ENST00000447439 C11orf68Q9H3H3 251 aaKnown RBP6.66□□□□□ -1.34
KLHL3-202ENST00000447439 DAZ3Q9NR90 486 aaKnown RBP6.66□□□□□ -1.34
KLHL3-202ENST00000447439 A0A096LPF7 62 aa6.66□□□□□ -1.34
KLHL3-202ENST00000447439 TRBV10-2A0A0K0K1G8 114 aa6.66□□□□□ -1.34
KLHL3-202ENST00000447439 LINC01600Q96MT4 127 aa6.66□□□□□ -1.34
KLHL3-202ENST00000447439 TMEM243Q9BU79 118 aa6.66□□□□□ -1.34
KLHL3-202ENST00000447439 TRBV10-1A0A0K0K1A3 114 aa6.65□□□□□ -1.35
KLHL3-202ENST00000447439 IGLV1-51P01701 117 aa6.65□□□□□ -1.35
KLHL3-202ENST00000447439 CIRBPQ14011 172 aaKnown RBP6.65□□□□□ -1.35
KLHL3-202ENST00000447439 TEX29Q8N6K0 151 aa6.65□□□□□ -1.35
KLHL3-202ENST00000447439 CSNK1G2-AS1Q8NCQ2 148 aa6.65□□□□□ -1.35
KLHL3-202ENST00000447439 GCN1Q92616 2671 aaKnown RBP6.65□□□□□ -1.35
KLHL3-202ENST00000447439 KRTAP10-3P60369 221 aa6.64□□□□□ -1.35
KLHL3-202ENST00000447439 CLPSL2Q6UWE3 100 aa6.64□□□□□ -1.35
KLHL3-202ENST00000447439 UBE2WQ96B02 151 aa6.64□□□□□ -1.35
KLHL3-202ENST00000447439 COX6CP09669 75 aa6.64□□□□□ -1.35
KLHL3-202ENST00000447439 IFITM1P13164 125 aa6.64□□□□□ -1.35
KLHL3-202ENST00000447439 C16orf74Q96GX8 76 aa6.64□□□□□ -1.35
KLHL3-202ENST00000447439 CHCHD5Q9BSY4 110 aa6.64□□□□□ -1.35
KLHL3-202ENST00000447439 FASNP49327 2511 aaKnown RBP6.64□□□□□ -1.35
KLHL3-202ENST00000447439 A0A1B0GV72 72 aa6.63□□□□□ -1.35
KLHL3-202ENST00000447439 LST1O00453 97 aa6.63□□□□□ -1.35
KLHL3-202ENST00000447439 DEFB4AO15263 64 aa6.63□□□□□ -1.35
KLHL3-202ENST00000447439 FAM19A3Q7Z5A8 133 aa6.63□□□□□ -1.35
KLHL3-202ENST00000447439 C5orf38Q86SI9 138 aa6.63□□□□□ -1.35
KLHL3-202ENST00000447439 VWFP04275 2813 aa6.63□□□□□ -1.35
KLHL3-202ENST00000447439 TMEM262E9PQX1 116 aa6.63□□□□□ -1.35
KLHL3-202ENST00000447439 RNASE1P07998 156 aaKnown RBP6.63□□□□□ -1.35
KLHL3-202ENST00000447439 FHL2Q14192 279 aa6.63□□□□□ -1.35
KLHL3-202ENST00000447439 TRAV8-4A0A0B4J246 113 aa6.63□□□□□ -1.35
KLHL3-202ENST00000447439 TTC32Q5I0X7 151 aa6.62□□□□□ -1.35
KLHL3-202ENST00000447439 LINC00482Q8N8I6 264 aa6.62□□□□□ -1.35
KLHL3-202ENST00000447439 CSDC2Q9Y534 153 aaKnown RBP6.62□□□□□ -1.35
KLHL3-202ENST00000447439 TRAV26-1A0A087WT03 109 aa6.62□□□□□ -1.35
KLHL3-202ENST00000447439 MIR7-3HGQ8N6C7 128 aa6.62□□□□□ -1.35
KLHL3-202ENST00000447439 FAM218AQ96MZ4 157 aa6.62□□□□□ -1.35
KLHL3-202ENST00000447439 PFN2P35080 140 aa6.61□□□□□ -1.35
KLHL3-202ENST00000447439 COX7B2Q8TF08 81 aa6.61□□□□□ -1.35
KLHL3-202ENST00000447439 Q9HAA7 133 aa6.61□□□□□ -1.35
KLHL3-202ENST00000447439 NOTCH2Q04721 2471 aa6.61□□□□□ -1.35
KLHL3-202ENST00000447439 HELZ2Q9BYK8 2649 aaKnown RBP6.6□□□□□ -1.35
KLHL3-202ENST00000447439 TRBV6-8A0A0A6YYG3 113 aa6.6□□□□□ -1.35
KLHL3-202ENST00000447439 TRBV6-4A0A1B0GX49 114 aa6.6□□□□□ -1.35
KLHL3-202ENST00000447439 Q8N3U1 123 aa6.6□□□□□ -1.35
KLHL3-202ENST00000447439 LINC00158P58513 81 aa6.6□□□□□ -1.35
KLHL3-202ENST00000447439 SHISA2Q6UWI4 295 aa6.6□□□□□ -1.35
KLHL3-202ENST00000447439 COPS9Q8WXC6 57 aa6.6□□□□□ -1.35
KLHL3-202ENST00000447439 C16orf95Q9H693 158 aa6.6□□□□□ -1.35
KLHL3-202ENST00000447439 UNC79Q9P2D8 2635 aa6.6□□□□□ -1.35
KLHL3-202ENST00000447439 H3BT86 120 aa6.59□□□□□ -1.35
KLHL3-202ENST00000447439 PF4P02776 101 aa6.59□□□□□ -1.35
KLHL3-202ENST00000447439 XCL1P47992 114 aa6.59□□□□□ -1.35
KLHL3-202ENST00000447439 CMC4P56277 68 aaPredicted RBP6.59□□□□□ -1.35
KLHL3-202ENST00000447439 C15orf53Q8NAA6 179 aa6.59□□□□□ -1.35
KLHL3-202ENST00000447439 OVOL2Q9BRP0 275 aa6.59□□□□□ -1.35
KLHL3-202ENST00000447439 HECTD1Q9ULT8 2610 aa6.59□□□□□ -1.35
KLHL3-202ENST00000447439 SNCGO76070 127 aa6.59□□□□□ -1.35
KLHL3-202ENST00000447439 GYPEP15421 78 aa6.59□□□□□ -1.35
KLHL3-202ENST00000447439 LINC00337Q8N6G1 96 aa6.59□□□□□ -1.35
KLHL3-202ENST00000447439 CITED1Q99966 193 aa6.59□□□□□ -1.35
KLHL3-202ENST00000447439 HIVEP2P31629 2446 aa6.58□□□□□ -1.36
KLHL3-202ENST00000447439 COX7A2LO14548 114 aa6.58□□□□□ -1.36
KLHL3-202ENST00000447439 IGKV2-28A0A075B6P5 120 aa6.58□□□□□ -1.36
KLHL3-202ENST00000447439 IGKV2D-28P01615 120 aa6.58□□□□□ -1.36
KLHL3-202ENST00000447439 HILS1P60008 231 aa6.58□□□□□ -1.36
KLHL3-202ENST00000447439 ANAPC13Q9BS18 74 aa6.57□□□□□ -1.36
KLHL3-202ENST00000447439 PPDPFQ9H3Y8 114 aa6.57□□□□□ -1.36
KLHL3-202ENST00000447439 SND1-IT1Q9HBX3 110 aa6.57□□□□□ -1.36
KLHL3-202ENST00000447439 IGHV3OR16-9A0A0B4J2B5 98 aa6.57□□□□□ -1.36
KLHL3-202ENST00000447439 FAM110AQ9BQ89 295 aa6.57□□□□□ -1.36
KLHL3-202ENST00000447439 HERV-K104P63124 156 aa6.56□□□□□ -1.36
KLHL3-202ENST00000447439 IGLV10-54A0A075B6I4 117 aa6.56□□□□□ -1.36
KLHL3-202ENST00000447439 LINC00959A0A1B0GUT2 108 aa6.56□□□□□ -1.36
KLHL3-202ENST00000447439 GAGE2BQ13066 116 aa6.56□□□□□ -1.36
KLHL3-202ENST00000447439 GAGE2EQ4V326 116 aa6.56□□□□□ -1.36
KLHL3-202ENST00000447439 GAGE2DQ9UEU5 116 aa6.56□□□□□ -1.36
KLHL3-202ENST00000447439 TENM1Q9UKZ4 2725 aa6.56□□□□□ -1.36
KLHL3-202ENST00000447439 ATP5G1P05496 136 aa6.55□□□□□ -1.36
KLHL3-202ENST00000447439 CCL18P55774 89 aa6.55□□□□□ -1.36
KLHL3-202ENST00000447439 DEFB135Q30KP9 77 aa6.55□□□□□ -1.36
KLHL3-202ENST00000447439 X6R8D5 127 aa6.55□□□□□ -1.36
KLHL3-202ENST00000447439 OTOGQ6ZRI0 2925 aa6.55□□□□□ -1.36
KLHL3-202ENST00000447439 A0A087WYN8 130 aa6.55□□□□□ -1.36
KLHL3-202ENST00000447439 CRPP02741 224 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms