RNA–Protein interactions for RNA: ENST00000446225.5

MCF2-206, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-206ENST00000446225 PRKDCP78527 4128 aaKnown RBP4.18□□□□□ -1.74
MCF2-206ENST00000446225 IGKV3-20P01619 116 aa4.17□□□□□ -1.74
MCF2-206ENST00000446225 PRM2P04554 102 aa4.17□□□□□ -1.74
MCF2-206ENST00000446225 CRYGAP11844 174 aa4.17□□□□□ -1.74
MCF2-206ENST00000446225 S100A4P26447 101 aaKnown RBP4.17□□□□□ -1.74
MCF2-206ENST00000446225 SYCNQ0VAF6 134 aa4.17□□□□□ -1.74
MCF2-206ENST00000446225 LGALS9BQ3B8N2 356 aa4.17□□□□□ -1.74
MCF2-206ENST00000446225 LINC01545Q5VT33 79 aa4.17□□□□□ -1.74
MCF2-206ENST00000446225 ALKAL2Q6UX46 152 aa4.17□□□□□ -1.74
MCF2-206ENST00000446225 OR8A1Q8NGG7 326 aa4.17□□□□□ -1.74
MCF2-206ENST00000446225 RAB37Q96AX2 223 aa4.17□□□□□ -1.74
MCF2-206ENST00000446225 MGST2Q99735 147 aa4.17□□□□□ -1.74
MCF2-206ENST00000446225 RABAC1Q9UI14 185 aa4.17□□□□□ -1.74
MCF2-206ENST00000446225 A0A1B0GW54 56 aa4.17□□□□□ -1.74
MCF2-206ENST00000446225 HLA-DQA1P01909 254 aa4.17□□□□□ -1.74
MCF2-206ENST00000446225 C10orf91Q5T1B1 145 aa4.17□□□□□ -1.74
MCF2-206ENST00000446225 WFDC10AQ9H1F0 79 aa4.17□□□□□ -1.74
MCF2-206ENST00000446225 UBE2L5PA0A1B0GUS4 154 aa4.16□□□□□ -1.74
MCF2-206ENST00000446225 HYPMO75409 117 aa4.16□□□□□ -1.74
MCF2-206ENST00000446225 CFDP00746 253 aaPredicted RBP4.16□□□□□ -1.74
MCF2-206ENST00000446225 LINC01554Q52M75 96 aa4.16□□□□□ -1.74
MCF2-206ENST00000446225 PATE2Q6UY27 113 aa4.16□□□□□ -1.74
MCF2-206ENST00000446225 KRTAP7-1Q8IUC3 87 aa4.16□□□□□ -1.74
MCF2-206ENST00000446225 IL36BQ9NZH7 164 aa4.16□□□□□ -1.74
MCF2-206ENST00000446225 SMAD5-AS1Q9Y6J3 95 aa4.16□□□□□ -1.74
MCF2-206ENST00000446225 M0R2P5 195 aa4.15□□□□□ -1.74
MCF2-206ENST00000446225 Q0VG73 95 aa4.15□□□□□ -1.74
MCF2-206ENST00000446225 MIC13Q5XKP0 118 aa4.15□□□□□ -1.74
MCF2-206ENST00000446225 BPIFA4PQ86YQ2 179 aa4.15□□□□□ -1.74
MCF2-206ENST00000446225 OR2T35Q8NGX2 323 aa4.15□□□□□ -1.74
MCF2-206ENST00000446225 RMI2Q96E14 147 aa4.15□□□□□ -1.74
MCF2-206ENST00000446225 TMEM223A0PJW6 202 aa4.15□□□□□ -1.75
MCF2-206ENST00000446225 H3BT86 120 aa4.15□□□□□ -1.75
MCF2-206ENST00000446225 TRACP01848 142 aa4.15□□□□□ -1.75
MCF2-206ENST00000446225 MT-ATP8P03928 68 aa4.15□□□□□ -1.75
MCF2-206ENST00000446225 TAS2R45P59539 299 aa4.15□□□□□ -1.75
MCF2-206ENST00000446225 LGALS9CQ6DKI2 356 aa4.15□□□□□ -1.75
MCF2-206ENST00000446225 CIRBP-AS1Q8TBR5 109 aa4.15□□□□□ -1.75
MCF2-206ENST00000446225 PRELID3AQ96N28 172 aa4.15□□□□□ -1.75
MCF2-206ENST00000446225 SHANK2-AS3Q9BTD1 123 aa4.15□□□□□ -1.75
MCF2-206ENST00000446225 SCRT1Q9BWW7 348 aa4.15□□□□□ -1.75
MCF2-206ENST00000446225 SLC39A9Q9NUM3 307 aa4.15□□□□□ -1.75
MCF2-206ENST00000446225 SERP1Q9Y6X1 66 aa4.15□□□□□ -1.75
MCF2-206ENST00000446225 DNAH9Q9NYC9 4486 aa4.14□□□□□ -1.75
MCF2-206ENST00000446225 TGP01266 2768 aa4.14□□□□□ -1.75
MCF2-206ENST00000446225 FXYD6-FXYD2A0A087WZ82 144 aa4.14□□□□□ -1.75
MCF2-206ENST00000446225 H3BRN7 92 aa4.14□□□□□ -1.75
MCF2-206ENST00000446225 HIST1H2BKO60814 126 aa4.14□□□□□ -1.75
MCF2-206ENST00000446225 HIST1H2BJP06899 126 aa4.14□□□□□ -1.75
MCF2-206ENST00000446225 TRGC1P0CF51 173 aa4.14□□□□□ -1.75
MCF2-206ENST00000446225 RPS10P46783 165 aaKnown RBP4.14□□□□□ -1.75
MCF2-206ENST00000446225 SNRPD3P62318 126 aaKnown RBP4.14□□□□□ -1.75
MCF2-206ENST00000446225 TDRG1Q3Y452 100 aa4.14□□□□□ -1.75
MCF2-206ENST00000446225 SBSPONQ8IVN8 264 aa4.14□□□□□ -1.75
MCF2-206ENST00000446225 B9D2Q9BPU9 175 aa4.14□□□□□ -1.75
MCF2-206ENST00000446225 NPCDR1Q9BY65 106 aa4.14□□□□□ -1.75
MCF2-206ENST00000446225 TRBV20-1A0A075B6N2 111 aa4.13□□□□□ -1.75
MCF2-206ENST00000446225 TRAV2A0A0B4J234 112 aa4.13□□□□□ -1.75
MCF2-206ENST00000446225 A0A0D9SG52 128 aa4.13□□□□□ -1.75
MCF2-206ENST00000446225 K7EP34 96 aa4.13□□□□□ -1.75
MCF2-206ENST00000446225 DEFB131AP59861 70 aa4.13□□□□□ -1.75
MCF2-206ENST00000446225 C10orf113Q5VZT2 155 aa4.13□□□□□ -1.75
MCF2-206ENST00000446225 LINC00322Q6ZN03 302 aaPredicted RBP4.13□□□□□ -1.75
MCF2-206ENST00000446225 KRTAP4-5Q9BYR2 181 aa4.13□□□□□ -1.75
MCF2-206ENST00000446225 UQCR10Q9UDW1 63 aa4.13□□□□□ -1.75
MCF2-206ENST00000446225 KLK5Q9Y337 293 aaPredicted RBP4.13□□□□□ -1.75
MCF2-206ENST00000446225 MUC21A0A0G2JKD1 596 aa4.13□□□□□ -1.75
MCF2-206ENST00000446225 ZNF324O75467 553 aaPredicted RBP4.13□□□□□ -1.75
MCF2-206ENST00000446225 CSN1S1P47710 185 aa4.13□□□□□ -1.75
MCF2-206ENST00000446225 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.13□□□□□ -1.75
MCF2-206ENST00000446225 ATP6V0E2Q8NHE4 81 aa4.13□□□□□ -1.75
MCF2-206ENST00000446225 EPDR1Q9UM22 224 aa4.13□□□□□ -1.75
MCF2-206ENST00000446225 LINC00588Q9Y4M8 146 aa4.13□□□□□ -1.75
MCF2-206ENST00000446225 K7ERJ3 54 aa4.12□□□□□ -1.75
MCF2-206ENST00000446225 NMBP08949 121 aa4.12□□□□□ -1.75
MCF2-206ENST00000446225 FABP4P15090 132 aa4.12□□□□□ -1.75
MCF2-206ENST00000446225 RNASE4P34096 147 aaKnown RBP4.12□□□□□ -1.75
MCF2-206ENST00000446225 DEFB1P60022 68 aa4.12□□□□□ -1.75
MCF2-206ENST00000446225 PSMG4Q5JS54 123 aa4.12□□□□□ -1.75
MCF2-206ENST00000446225 DAND5Q8N907 189 aa4.12□□□□□ -1.75
MCF2-206ENST00000446225 HIST1H2BLQ99880 126 aa4.12□□□□□ -1.75
MCF2-206ENST00000446225 KRTAP9-3Q9BYQ3 159 aa4.12□□□□□ -1.75
MCF2-206ENST00000446225 SLC35B3Q9H1N7 401 aa4.12□□□□□ -1.75
MCF2-206ENST00000446225 NBEAL2Q6ZNJ1 2754 aa4.11□□□□□ -1.75
MCF2-206ENST00000446225 C17orf112F2Z3M2 114 aa4.11□□□□□ -1.75
MCF2-206ENST00000446225 RPL7L1Q6DKI1 246 aaKnown RBP4.11□□□□□ -1.75
MCF2-206ENST00000446225 MIR17HGQ75NE6 70 aa4.11□□□□□ -1.75
MCF2-206ENST00000446225 HUWE1Q7Z6Z7 4374 aaKnown RBP4.11□□□□□ -1.75
MCF2-206ENST00000446225 F8W1H4 67 aa4.11□□□□□ -1.75
MCF2-206ENST00000446225 HBDP02042 147 aa4.11□□□□□ -1.75
MCF2-206ENST00000446225 PRB4P10163 310 aaPredicted RBP4.11□□□□□ -1.75
MCF2-206ENST00000446225 HLA-DMBP28068 263 aa4.11□□□□□ -1.75
MCF2-206ENST00000446225 FAM167A-AS1Q96KT0 104 aa4.11□□□□□ -1.75
MCF2-206ENST00000446225 CYTL1Q9NRR1 136 aa4.11□□□□□ -1.75
MCF2-206ENST00000446225 HMSDA8MTL9 139 aa4.1□□□□□ -1.75
MCF2-206ENST00000446225 IGLC2P0DOY2 106 aa4.1□□□□□ -1.75
MCF2-206ENST00000446225 TPT1P13693 172 aaKnown RBP4.1□□□□□ -1.75
MCF2-206ENST00000446225 GDF5OSQ5U4N7 250 aa4.1□□□□□ -1.75
MCF2-206ENST00000446225 C7orf65Q6ZTY9 151 aa4.1□□□□□ -1.75
MCF2-206ENST00000446225 TIMM9Q9Y5J7 89 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms