RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 UBE2D1P51668 147 aa9.7□□□□□ -0.86
CSNK1E-210ENST00000442216 RAB5BP61020 215 aa9.7□□□□□ -0.86
CSNK1E-210ENST00000442216 LINC00173Q6ZV60 143 aa9.7□□□□□ -0.86
CSNK1E-210ENST00000442216 FAM19A3Q7Z5A8 133 aa9.7□□□□□ -0.86
CSNK1E-210ENST00000442216 LINC00614P0C842 121 aa9.69□□□□□ -0.86
CSNK1E-210ENST00000442216 LINC00242Q5T6M2 205 aa9.69□□□□□ -0.86
CSNK1E-210ENST00000442216 SDIM1Q6ZPB5 146 aa9.69□□□□□ -0.86
CSNK1E-210ENST00000442216 C5orf38Q86SI9 138 aa9.69□□□□□ -0.86
CSNK1E-210ENST00000442216 SCGB3A1Q96QR1 104 aa9.69□□□□□ -0.86
CSNK1E-210ENST00000442216 SEC11AP67812 179 aa9.68□□□□□ -0.86
CSNK1E-210ENST00000442216 OR10D4PQ8NGN7 298 aa9.68□□□□□ -0.86
CSNK1E-210ENST00000442216 HERC2O95714 4834 aa9.67□□□□□ -0.86
CSNK1E-210ENST00000442216 LINC01561Q8N1V8 128 aa9.67□□□□□ -0.86
CSNK1E-210ENST00000442216 URB1-AS1Q96HZ7 61 aa9.67□□□□□ -0.86
CSNK1E-210ENST00000442216 C2orf48Q96LS8 159 aa9.67□□□□□ -0.86
CSNK1E-210ENST00000442216 CHAC1Q9BUX1 264 aa9.67□□□□□ -0.86
CSNK1E-210ENST00000442216 PKIGQ9Y2B9 76 aa9.67□□□□□ -0.86
CSNK1E-210ENST00000442216 APOBP04114 4563 aaKnown RBP9.67□□□□□ -0.86
CSNK1E-210ENST00000442216 A0A087WZ39 114 aa9.66□□□□□ -0.86
CSNK1E-210ENST00000442216 F8WDY8 70 aa9.66□□□□□ -0.86
CSNK1E-210ENST00000442216 KRTAP17-1Q9BYP8 105 aa9.66□□□□□ -0.86
CSNK1E-210ENST00000442216 RYR1P21817 5038 aa9.65□□□□□ -0.86
CSNK1E-210ENST00000442216 IGLV4-69A0A075B6H9 119 aa9.65□□□□□ -0.86
CSNK1E-210ENST00000442216 COX6A2Q02221 97 aa9.65□□□□□ -0.86
CSNK1E-210ENST00000442216 SYCNQ0VAF6 134 aa9.65□□□□□ -0.86
CSNK1E-210ENST00000442216 CIRBPQ14011 172 aaKnown RBP9.65□□□□□ -0.86
CSNK1E-210ENST00000442216 ZC2HC1BQ5TFG8 222 aa9.65□□□□□ -0.86
CSNK1E-210ENST00000442216 SCXQ7RTU7 201 aa9.65□□□□□ -0.86
CSNK1E-210ENST00000442216 CARD19Q96LW7 228 aa9.65□□□□□ -0.86
CSNK1E-210ENST00000442216 HSPG2P98160 4391 aa9.65□□□□□ -0.87
CSNK1E-210ENST00000442216 A0A096LNJ9 63 aa9.64□□□□□ -0.87
CSNK1E-210ENST00000442216 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.64□□□□□ -0.87
CSNK1E-210ENST00000442216 HBDP02042 147 aa9.64□□□□□ -0.87
CSNK1E-210ENST00000442216 HERVK_113P63121 156 aa9.64□□□□□ -0.87
CSNK1E-210ENST00000442216 CHCHD1Q96BP2 118 aaKnown RBP9.64□□□□□ -0.87
CSNK1E-210ENST00000442216 LINC00526Q96FQ7 95 aa9.64□□□□□ -0.87
CSNK1E-210ENST00000442216 COLCA2A8K830 154 aa9.63□□□□□ -0.87
CSNK1E-210ENST00000442216 TRGC2P03986 189 aa9.63□□□□□ -0.87
CSNK1E-210ENST00000442216 HAMPP81172 84 aa9.63□□□□□ -0.87
CSNK1E-210ENST00000442216 SPAG11BQ08648 103 aa9.63□□□□□ -0.87
CSNK1E-210ENST00000442216 CIRBP-AS1Q8TBR5 109 aa9.63□□□□□ -0.87
CSNK1E-210ENST00000442216 ORAOV1Q8WV07 137 aa9.63□□□□□ -0.87
CSNK1E-210ENST00000442216 CAMK2N2Q96S95 79 aa9.63□□□□□ -0.87
CSNK1E-210ENST00000442216 EPM2AB3EWF7 344 aa9.62□□□□□ -0.87
CSNK1E-210ENST00000442216 PMVKQ15126 192 aa9.62□□□□□ -0.87
CSNK1E-210ENST00000442216 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.62□□□□□ -0.87
CSNK1E-210ENST00000442216 FAM229AH3BQW9 127 aa9.61□□□□□ -0.87
CSNK1E-210ENST00000442216 SMR3BP02814 79 aaPredicted RBP9.61□□□□□ -0.87
CSNK1E-210ENST00000442216 RNF151Q2KHN1 245 aa9.61□□□□□ -0.87
CSNK1E-210ENST00000442216 PDZD11Q5EBL8 140 aa9.61□□□□□ -0.87
CSNK1E-210ENST00000442216 KRTAP4-5Q9BYR2 181 aa9.61□□□□□ -0.87
CSNK1E-210ENST00000442216 CST9LQ9H4G1 147 aa9.61□□□□□ -0.87
CSNK1E-210ENST00000442216 GEMIN7Q9H840 131 aaKnown RBP9.61□□□□□ -0.87
CSNK1E-210ENST00000442216 TINCRA0A1B0GVN0 87 aa9.6□□□□□ -0.87
CSNK1E-210ENST00000442216 ATP5LO75964 103 aa9.6□□□□□ -0.87
CSNK1E-210ENST00000442216 Q5VSD8 79 aa9.6□□□□□ -0.87
CSNK1E-210ENST00000442216 Q6ZRU5 148 aa9.6□□□□□ -0.87
CSNK1E-210ENST00000442216 SPACA4Q8TDM5 124 aa9.6□□□□□ -0.87
CSNK1E-210ENST00000442216 LINC00474Q9P2X8 69 aa9.6□□□□□ -0.87
CSNK1E-210ENST00000442216 DNAH8Q96JB1 4490 aa9.59□□□□□ -0.87
CSNK1E-210ENST00000442216 A0A0J9YXV3 536 aa9.59□□□□□ -0.87
CSNK1E-210ENST00000442216 PANO1I0J062 215 aa9.59□□□□□ -0.87
CSNK1E-210ENST00000442216 NDUFA1O15239 70 aa9.59□□□□□ -0.87
CSNK1E-210ENST00000442216 KIAA0087Q14695 138 aa9.59□□□□□ -0.87
CSNK1E-210ENST00000442216 MRPL35Q9NZE8 188 aaKnown RBP9.59□□□□□ -0.87
CSNK1E-210ENST00000442216 IGLV5-45A0A087WSX0 123 aa9.58□□□□□ -0.88
CSNK1E-210ENST00000442216 LOC107984640A0A0U1RRK4 108 aa9.58□□□□□ -0.88
CSNK1E-210ENST00000442216 PMCHL1Q16048 86 aa9.58□□□□□ -0.88
CSNK1E-210ENST00000442216 BAGE3Q86Y29 109 aa9.58□□□□□ -0.88
CSNK1E-210ENST00000442216 CDKN2A-AS1Q9UH64 79 aa9.58□□□□□ -0.88
CSNK1E-210ENST00000442216 LINC00528Q8N1L1 170 aa9.57□□□□□ -0.88
CSNK1E-210ENST00000442216 PACRGQ96M98 296 aaPredicted RBP9.57□□□□□ -0.88
CSNK1E-210ENST00000442216 A0A096LNI7 61 aa9.56□□□□□ -0.88
CSNK1E-210ENST00000442216 HSBP1O75506 76 aa9.56□□□□□ -0.88
CSNK1E-210ENST00000442216 PLA2G1BP04054 148 aaKnown RBP9.56□□□□□ -0.88
CSNK1E-210ENST00000442216 CHTF8P0CG12 524 aa9.56□□□□□ -0.88
CSNK1E-210ENST00000442216 Q8IZM0 81 aa9.56□□□□□ -0.88
CSNK1E-210ENST00000442216 DPH3Q96FX2 82 aa9.56□□□□□ -0.88
CSNK1E-210ENST00000442216 A0A087WYN8 130 aa9.55□□□□□ -0.88
CSNK1E-210ENST00000442216 SCO1O75880 301 aa9.55□□□□□ -0.88
CSNK1E-210ENST00000442216 PRSS2P07478 247 aa9.55□□□□□ -0.88
CSNK1E-210ENST00000442216 IGLC3P0DOY3 106 aa9.55□□□□□ -0.88
CSNK1E-210ENST00000442216 LINC00469Q8N7U9 141 aa9.55□□□□□ -0.88
CSNK1E-210ENST00000442216 PLAC8Q9NZF1 115 aa9.55□□□□□ -0.88
CSNK1E-210ENST00000442216 IGKV2-24A0A0C4DH68 120 aa9.54□□□□□ -0.88
CSNK1E-210ENST00000442216 TRBV30A0A0K0K1B3 111 aa9.54□□□□□ -0.88
CSNK1E-210ENST00000442216 TLX1NBP0CAT3 122 aa9.54□□□□□ -0.88
CSNK1E-210ENST00000442216 PTTG1IPP53801 180 aa9.54□□□□□ -0.88
CSNK1E-210ENST00000442216 MAJINQ3KP22 176 aa9.54□□□□□ -0.88
CSNK1E-210ENST00000442216 CXCL5P42830 114 aa9.53□□□□□ -0.88
CSNK1E-210ENST00000442216 NDUFA6P56556 154 aa9.53□□□□□ -0.88
CSNK1E-210ENST00000442216 C6orf226Q5I0X4 101 aa9.53□□□□□ -0.88
CSNK1E-210ENST00000442216 UNQ6190/PRO20217Q6UXQ8 127 aa9.53□□□□□ -0.88
CSNK1E-210ENST00000442216 IFI27L1Q96BM0 104 aa9.53□□□□□ -0.88
CSNK1E-210ENST00000442216 TRAV12-1A0A0B4J245 112 aa9.52□□□□□ -0.89
CSNK1E-210ENST00000442216 SMIM1B2RUZ4 78 aa9.52□□□□□ -0.89
CSNK1E-210ENST00000442216 H3BRM9 83 aa9.52□□□□□ -0.89
CSNK1E-210ENST00000442216 SERF1AO75920 110 aa9.52□□□□□ -0.89
CSNK1E-210ENST00000442216 C10orf25Q5T742 122 aa9.52□□□□□ -0.89
CSNK1E-210ENST00000442216 TOMM7Q9P0U1 55 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms