RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 DAZ3Q9NR90 486 aaKnown RBP9.62□□□□□ -0.87
HERPUD1-204ENST00000439977 TRAV25A0A0B4J276 109 aa9.61□□□□□ -0.87
HERPUD1-204ENST00000439977 TMEM262E9PQX1 116 aa9.61□□□□□ -0.87
HERPUD1-204ENST00000439977 VWFP04275 2813 aa9.6□□□□□ -0.87
HERPUD1-204ENST00000439977 TRGV4A0A0C4DH28 118 aa9.6□□□□□ -0.87
HERPUD1-204ENST00000439977 PLAC8L1A1L4L8 177 aa9.6□□□□□ -0.87
HERPUD1-204ENST00000439977 HIVEP2P31629 2446 aa9.6□□□□□ -0.87
HERPUD1-204ENST00000439977 TRAV26-1A0A087WT03 109 aa9.6□□□□□ -0.87
HERPUD1-204ENST00000439977 TRAV8-4A0A0B4J246 113 aa9.6□□□□□ -0.87
HERPUD1-204ENST00000439977 TRBV10-1A0A0K0K1A3 114 aa9.6□□□□□ -0.87
HERPUD1-204ENST00000439977 LST1O00453 97 aa9.6□□□□□ -0.87
HERPUD1-204ENST00000439977 IFITM1P13164 125 aa9.6□□□□□ -0.87
HERPUD1-204ENST00000439977 TMEM243Q9BU79 118 aa9.6□□□□□ -0.87
HERPUD1-204ENST00000439977 PDZD2O15018 2839 aa9.59□□□□□ -0.87
HERPUD1-204ENST00000439977 F5H768 121 aa9.59□□□□□ -0.87
HERPUD1-204ENST00000439977 TIMM17BO60830 172 aa9.59□□□□□ -0.87
HERPUD1-204ENST00000439977 DEFB130BP0DP73 79 aa9.59□□□□□ -0.87
HERPUD1-204ENST00000439977 DEFB130AP0DP74 79 aa9.59□□□□□ -0.87
HERPUD1-204ENST00000439977 TMEM86BQ8N661 226 aa9.59□□□□□ -0.87
HERPUD1-204ENST00000439977 TEX29Q8N6K0 151 aa9.59□□□□□ -0.87
HERPUD1-204ENST00000439977 IGLV4-60A0A075B6I1 120 aa9.58□□□□□ -0.88
HERPUD1-204ENST00000439977 RNF183Q96D59 192 aa9.58□□□□□ -0.88
HERPUD1-204ENST00000439977 CLUHP3Q96NS8 147 aa9.58□□□□□ -0.88
HERPUD1-204ENST00000439977 SNCGO76070 127 aa9.58□□□□□ -0.88
HERPUD1-204ENST00000439977 HELZ2Q9BYK8 2649 aaKnown RBP9.58□□□□□ -0.88
HERPUD1-204ENST00000439977 TTC32Q5I0X7 151 aa9.57□□□□□ -0.88
HERPUD1-204ENST00000439977 FASNP49327 2511 aaKnown RBP9.57□□□□□ -0.88
HERPUD1-204ENST00000439977 CHCHD5Q9BSY4 110 aa9.57□□□□□ -0.88
HERPUD1-204ENST00000439977 M0QXV9 152 aa9.56□□□□□ -0.88
HERPUD1-204ENST00000439977 C11orf68Q9H3H3 251 aaKnown RBP9.56□□□□□ -0.88
HERPUD1-204ENST00000439977 CSDC2Q9Y534 153 aaKnown RBP9.56□□□□□ -0.88
HERPUD1-204ENST00000439977 ANK3Q12955 4377 aaKnown RBP9.56□□□□□ -0.88
HERPUD1-204ENST00000439977 C15orf53Q8NAA6 179 aa9.56□□□□□ -0.88
HERPUD1-204ENST00000439977 C16orf74Q96GX8 76 aa9.55□□□□□ -0.88
HERPUD1-204ENST00000439977 ANAPC13Q9BS18 74 aa9.55□□□□□ -0.88
HERPUD1-204ENST00000439977 C19orf73Q9NVV2 129 aa9.55□□□□□ -0.88
HERPUD1-204ENST00000439977 A0A096LPF7 62 aa9.55□□□□□ -0.88
HERPUD1-204ENST00000439977 GAGE2BQ13066 116 aa9.55□□□□□ -0.88
HERPUD1-204ENST00000439977 GAGE2EQ4V326 116 aa9.55□□□□□ -0.88
HERPUD1-204ENST00000439977 C5orf38Q86SI9 138 aa9.55□□□□□ -0.88
HERPUD1-204ENST00000439977 SMR3AQ99954 134 aa9.55□□□□□ -0.88
HERPUD1-204ENST00000439977 GAGE2DQ9UEU5 116 aa9.55□□□□□ -0.88
HERPUD1-204ENST00000439977 CITED1Q99966 193 aa9.55□□□□□ -0.88
HERPUD1-204ENST00000439977 MIR7-3HGQ8N6C7 128 aa9.54□□□□□ -0.88
HERPUD1-204ENST00000439977 H3BT86 120 aa9.54□□□□□ -0.88
HERPUD1-204ENST00000439977 IGLV1-51P01701 117 aa9.54□□□□□ -0.88
HERPUD1-204ENST00000439977 CSNK1G2-AS1Q8NCQ2 148 aa9.54□□□□□ -0.88
HERPUD1-204ENST00000439977 PFN2P35080 140 aa9.53□□□□□ -0.88
HERPUD1-204ENST00000439977 KRTAP1-1Q07627 177 aa9.53□□□□□ -0.88
HERPUD1-204ENST00000439977 CLPSL2Q6UWE3 100 aa9.53□□□□□ -0.88
HERPUD1-204ENST00000439977 FAM218AQ96MZ4 157 aa9.53□□□□□ -0.88
HERPUD1-204ENST00000439977 UNC79Q9P2D8 2635 aa9.53□□□□□ -0.88
HERPUD1-204ENST00000439977 Q9HAA7 133 aa9.53□□□□□ -0.88
HERPUD1-204ENST00000439977 LINC00158P58513 81 aa9.52□□□□□ -0.88
HERPUD1-204ENST00000439977 FHL2Q14192 279 aa9.52□□□□□ -0.88
HERPUD1-204ENST00000439977 COX7A2LO14548 114 aa9.52□□□□□ -0.89
HERPUD1-204ENST00000439977 HECTD1Q9ULT8 2610 aa9.52□□□□□ -0.89
HERPUD1-204ENST00000439977 TRBV6-4A0A1B0GX49 114 aa9.52□□□□□ -0.89
HERPUD1-204ENST00000439977 COX7B2Q8TF08 81 aa9.52□□□□□ -0.89
HERPUD1-204ENST00000439977 TRBV6-8A0A0A6YYG3 113 aa9.51□□□□□ -0.89
HERPUD1-204ENST00000439977 FAM19A3Q7Z5A8 133 aa9.51□□□□□ -0.89
HERPUD1-204ENST00000439977 SHISA2Q6UWI4 295 aa9.51□□□□□ -0.89
HERPUD1-204ENST00000439977 DEFB4AO15263 64 aa9.5□□□□□ -0.89
HERPUD1-204ENST00000439977 LINC00337Q8N6G1 96 aa9.5□□□□□ -0.89
HERPUD1-204ENST00000439977 HERV-K104P63124 156 aa9.49□□□□□ -0.89
HERPUD1-204ENST00000439977 SND1-IT1Q9HBX3 110 aa9.49□□□□□ -0.89
HERPUD1-204ENST00000439977 RNASE1P07998 156 aaKnown RBP9.49□□□□□ -0.89
HERPUD1-204ENST00000439977 NHLRC4P0CG21 123 aaPredicted RBP9.49□□□□□ -0.89
HERPUD1-204ENST00000439977 XCL1P47992 114 aa9.49□□□□□ -0.89
HERPUD1-204ENST00000439977 LINC01600Q96MT4 127 aa9.49□□□□□ -0.89
HERPUD1-204ENST00000439977 IGKV2-28A0A075B6P5 120 aa9.48□□□□□ -0.89
HERPUD1-204ENST00000439977 IGKV2D-28P01615 120 aa9.48□□□□□ -0.89
HERPUD1-204ENST00000439977 BAALC-AS2P0C853 105 aa9.48□□□□□ -0.89
HERPUD1-204ENST00000439977 OVOL2Q9BRP0 275 aa9.48□□□□□ -0.89
HERPUD1-204ENST00000439977 IGHV3OR16-9A0A0B4J2B5 98 aa9.48□□□□□ -0.89
HERPUD1-204ENST00000439977 SPATA3Q8NHX4 192 aa9.48□□□□□ -0.89
HERPUD1-204ENST00000439977 GYPEP15421 78 aa9.47□□□□□ -0.89
HERPUD1-204ENST00000439977 NDUFV3P56181 108 aaKnown RBP9.47□□□□□ -0.89
HERPUD1-204ENST00000439977 CRPP02741 224 aa9.47□□□□□ -0.89
HERPUD1-204ENST00000439977 LINC00482Q8N8I6 264 aa9.47□□□□□ -0.89
HERPUD1-204ENST00000439977 TENM1Q9UKZ4 2725 aa9.47□□□□□ -0.89
HERPUD1-204ENST00000439977 KRTAP10-3P60369 221 aa9.46□□□□□ -0.89
HERPUD1-204ENST00000439977 COPS9Q8WXC6 57 aa9.46□□□□□ -0.89
HERPUD1-204ENST00000439977 PF4P02776 101 aa9.46□□□□□ -0.9
HERPUD1-204ENST00000439977 ATP5G1P05496 136 aa9.46□□□□□ -0.9
HERPUD1-204ENST00000439977 CCL18P55774 89 aa9.45□□□□□ -0.9
HERPUD1-204ENST00000439977 CMC4P56277 68 aaPredicted RBP9.45□□□□□ -0.9
HERPUD1-204ENST00000439977 OTOGQ6ZRI0 2925 aa9.45□□□□□ -0.9
HERPUD1-204ENST00000439977 B5MCH6 92 aa9.45□□□□□ -0.9
HERPUD1-204ENST00000439977 C6orf226Q5I0X4 101 aa9.45□□□□□ -0.9
HERPUD1-204ENST00000439977 OR13C6PQ8NH95 151 aa9.45□□□□□ -0.9
HERPUD1-204ENST00000439977 C16orf95Q9H693 158 aa9.45□□□□□ -0.9
HERPUD1-204ENST00000439977 PAX4O43316 350 aa9.45□□□□□ -0.9
HERPUD1-204ENST00000439977 Q8N3U1 123 aa9.45□□□□□ -0.9
HERPUD1-204ENST00000439977 LINC00959A0A1B0GUT2 108 aa9.44□□□□□ -0.9
HERPUD1-204ENST00000439977 SMIM11BQ8TCY0 68 aa9.44□□□□□ -0.9
HERPUD1-204ENST00000439977 TRRAPQ9Y4A5 3859 aa9.44□□□□□ -0.9
HERPUD1-204ENST00000439977 A0A087WYN8 130 aa9.44□□□□□ -0.9
HERPUD1-204ENST00000439977 CCDC179H3BU77 68 aa9.43□□□□□ -0.9
HERPUD1-204ENST00000439977 C22orf24Q9Y442 160 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms