RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 IGKV2D-26A0A0A0MRZ7 120 aa8.39□□□□□ -1.07
PTCH1-208ENST00000430669 PROK1P58294 105 aa8.38□□□□□ -1.07
PTCH1-208ENST00000430669 LINC00310P59036 64 aa8.38□□□□□ -1.07
PTCH1-208ENST00000430669 ACANP16112 2415 aa8.38□□□□□ -1.07
PTCH1-208ENST00000430669 JMJD1CQ15652 2540 aa8.38□□□□□ -1.07
PTCH1-208ENST00000430669 WFDC2Q14508 124 aa8.38□□□□□ -1.07
PTCH1-208ENST00000430669 NCR3O14931 201 aa8.38□□□□□ -1.07
PTCH1-208ENST00000430669 CDC42SE2Q9NRR3 84 aa8.38□□□□□ -1.07
PTCH1-208ENST00000430669 COX7BP24311 80 aa8.37□□□□□ -1.07
PTCH1-208ENST00000430669 POLQO75417 2590 aa8.37□□□□□ -1.07
PTCH1-208ENST00000430669 HAMPP81172 84 aa8.37□□□□□ -1.07
PTCH1-208ENST00000430669 IGLV2-18A0A075B6J9 118 aa8.37□□□□□ -1.07
PTCH1-208ENST00000430669 C9orf153Q5TBE3 101 aa8.37□□□□□ -1.07
PTCH1-208ENST00000430669 Q8IZM0 81 aa8.37□□□□□ -1.07
PTCH1-208ENST00000430669 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.37□□□□□ -1.07
PTCH1-208ENST00000430669 CLEC2BQ92478 149 aa8.37□□□□□ -1.07
PTCH1-208ENST00000430669 KPRPQ5T749 579 aaPredicted RBP8.36□□□□□ -1.07
PTCH1-208ENST00000430669 MAPKAPK5-AS1Q8N8E1 139 aa8.36□□□□□ -1.07
PTCH1-208ENST00000430669 CHKB-CPT1BH3BT56 60 aa8.36□□□□□ -1.07
PTCH1-208ENST00000430669 TRACP01848 142 aa8.36□□□□□ -1.07
PTCH1-208ENST00000430669 LINC00482Q8N8I6 264 aa8.36□□□□□ -1.07
PTCH1-208ENST00000430669 BBC3Q96PG8 261 aaPredicted RBP8.36□□□□□ -1.07
PTCH1-208ENST00000430669 F8WDY8 70 aa8.36□□□□□ -1.07
PTCH1-208ENST00000430669 LECT2O14960 151 aa8.36□□□□□ -1.07
PTCH1-208ENST00000430669 RBX1P62877 108 aa8.36□□□□□ -1.07
PTCH1-208ENST00000430669 Q8N976 141 aa8.36□□□□□ -1.07
PTCH1-208ENST00000430669 SMIM20Q8N5G0 67 aa8.36□□□□□ -1.07
PTCH1-208ENST00000430669 SZT2Q5T011 3432 aa8.35□□□□□ -1.07
PTCH1-208ENST00000430669 LINC01561Q8N1V8 128 aa8.35□□□□□ -1.07
PTCH1-208ENST00000430669 URB1-AS1Q96HZ7 61 aa8.35□□□□□ -1.07
PTCH1-208ENST00000430669 CFAP54Q96N23 3096 aa8.35□□□□□ -1.07
PTCH1-208ENST00000430669 WFDC10AQ9H1F0 79 aa8.35□□□□□ -1.07
PTCH1-208ENST00000430669 ATOX1O00244 68 aa8.34□□□□□ -1.07
PTCH1-208ENST00000430669 DEFB105AQ8NG35 78 aa8.34□□□□□ -1.07
PTCH1-208ENST00000430669 AMELXQ99217 191 aa8.34□□□□□ -1.07
PTCH1-208ENST00000430669 IGHV4-30-4P0DP06 118 aa8.34□□□□□ -1.07
PTCH1-208ENST00000430669 HIGD2BQ4VC39 106 aa8.34□□□□□ -1.07
PTCH1-208ENST00000430669 EDN2P20800 178 aa8.34□□□□□ -1.07
PTCH1-208ENST00000430669 LINC00959A0A1B0GUT2 108 aa8.34□□□□□ -1.07
PTCH1-208ENST00000430669 A0A1B0GUV1 79 aa8.34□□□□□ -1.07
PTCH1-208ENST00000430669 FASNP49327 2511 aaKnown RBP8.34□□□□□ -1.07
PTCH1-208ENST00000430669 GAS8-AS1O95177 125 aa8.33□□□□□ -1.08
PTCH1-208ENST00000430669 IGLV4-69A0A075B6H9 119 aa8.33□□□□□ -1.08
PTCH1-208ENST00000430669 UBE2AP49459 152 aa8.33□□□□□ -1.08
PTCH1-208ENST00000430669 POM121L12Q8N7R1 296 aa8.32□□□□□ -1.08
PTCH1-208ENST00000430669 A0A087WZ39 114 aa8.32□□□□□ -1.08
PTCH1-208ENST00000430669 TRIAP1O43715 76 aa8.32□□□□□ -1.08
PTCH1-208ENST00000430669 RNF183Q96D59 192 aa8.32□□□□□ -1.08
PTCH1-208ENST00000430669 B9D2Q9BPU9 175 aa8.32□□□□□ -1.08
PTCH1-208ENST00000430669 A0A1B0GX51 115 aa8.32□□□□□ -1.08
PTCH1-208ENST00000430669 SEC61GP60059 68 aa8.31□□□□□ -1.08
PTCH1-208ENST00000430669 UNC80Q8N2C7 3258 aa8.31□□□□□ -1.08
PTCH1-208ENST00000430669 ATP5EP2Q5VTU8 51 aa8.31□□□□□ -1.08
PTCH1-208ENST00000430669 FHL3Q13643 280 aa8.31□□□□□ -1.08
PTCH1-208ENST00000430669 C1orf158Q8N1D5 194 aa8.31□□□□□ -1.08
PTCH1-208ENST00000430669 SMR3AQ99954 134 aa8.3□□□□□ -1.08
PTCH1-208ENST00000430669 FHL2Q14192 279 aa8.3□□□□□ -1.08
PTCH1-208ENST00000430669 LINC00643Q86TS7 51 aa8.29□□□□□ -1.08
PTCH1-208ENST00000430669 NREPQ16612 68 aa8.29□□□□□ -1.08
PTCH1-208ENST00000430669 FSHBP01225 129 aa8.29□□□□□ -1.08
PTCH1-208ENST00000430669 LOC100131303A0A0U1RQF7 123 aa8.29□□□□□ -1.08
PTCH1-208ENST00000430669 EPG5Q9HCE0 2579 aa8.28□□□□□ -1.08
PTCH1-208ENST00000430669 TRAV23DV6A0A075B6W5 121 aa8.28□□□□□ -1.08
PTCH1-208ENST00000430669 MGAQ8IWI9 3026 aa8.28□□□□□ -1.08
PTCH1-208ENST00000430669 LINC00474Q9P2X8 69 aa8.28□□□□□ -1.08
PTCH1-208ENST00000430669 NDUFB1O75438 58 aa8.28□□□□□ -1.08
PTCH1-208ENST00000430669 SYCNQ0VAF6 134 aa8.28□□□□□ -1.08
PTCH1-208ENST00000430669 TNRC18O15417 2968 aaPredicted RBP8.28□□□□□ -1.08
PTCH1-208ENST00000430669 A0A0J9YWU9 116 aa8.27□□□□□ -1.08
PTCH1-208ENST00000430669 LINC00242Q5T6M2 205 aa8.27□□□□□ -1.09
PTCH1-208ENST00000430669 NUPR2A6NF83 97 aa8.27□□□□□ -1.09
PTCH1-208ENST00000430669 LST1O00453 97 aa8.27□□□□□ -1.09
PTCH1-208ENST00000430669 C11orf72Q8NBR9 251 aa8.27□□□□□ -1.09
PTCH1-208ENST00000430669 A0A096LNJ9 63 aa8.27□□□□□ -1.09
PTCH1-208ENST00000430669 DHRS4-AS1Q9P1J3 65 aa8.27□□□□□ -1.09
PTCH1-208ENST00000430669 M0R378 163 aa8.26□□□□□ -1.09
PTCH1-208ENST00000430669 KIF25-AS1Q9Y6Z4 181 aa8.26□□□□□ -1.09
PTCH1-208ENST00000430669 PRM2P04554 102 aa8.26□□□□□ -1.09
PTCH1-208ENST00000430669 FLNAP21333 2647 aaKnown RBP8.26□□□□□ -1.09
PTCH1-208ENST00000430669 SMIM1B2RUZ4 78 aa8.26□□□□□ -1.09
PTCH1-208ENST00000430669 TEX49A0A1B0GTD5 131 aa8.25□□□□□ -1.09
PTCH1-208ENST00000430669 LOC107984640A0A0U1RRK4 108 aa8.25□□□□□ -1.09
PTCH1-208ENST00000430669 CFAP46Q8IYW2 2715 aa8.24□□□□□ -1.09
PTCH1-208ENST00000430669 IMUPQ9GZP8 106 aa8.24□□□□□ -1.09
PTCH1-208ENST00000430669 FAM236AA0A1B0GUQ0 79 aa8.23□□□□□ -1.09
PTCH1-208ENST00000430669 FAM236BA0A1B0GV22 79 aa8.23□□□□□ -1.09
PTCH1-208ENST00000430669 C14orf132Q9NPU4 83 aa8.23□□□□□ -1.09
PTCH1-208ENST00000430669 M0QXV9 152 aa8.23□□□□□ -1.09
PTCH1-208ENST00000430669 NANOS2P60321 138 aaKnown RBP8.22□□□□□ -1.09
PTCH1-208ENST00000430669 VCANP13611 3396 aa8.22□□□□□ -1.09
PTCH1-208ENST00000430669 USP34Q70CQ2 3546 aa8.22□□□□□ -1.09
PTCH1-208ENST00000430669 LRCOL1A6NCL2 159 aa8.22□□□□□ -1.09
PTCH1-208ENST00000430669 OXLD1Q5BKU9 147 aa8.22□□□□□ -1.09
PTCH1-208ENST00000430669 TMEM258P61165 79 aa8.21□□□□□ -1.09
PTCH1-208ENST00000430669 SMIM11BQ8TCY0 68 aa8.21□□□□□ -1.09
PTCH1-208ENST00000430669 REV3LO60673 3130 aa8.21□□□□□ -1.09
PTCH1-208ENST00000430669 COX6A2Q02221 97 aa8.21□□□□□ -1.09
PTCH1-208ENST00000430669 CENPEQ02224 2701 aa8.21□□□□□ -1.1
PTCH1-208ENST00000430669 NDUFC2O95298 119 aa8.21□□□□□ -1.1
PTCH1-208ENST00000430669 EGFEM1PQ0D2K5 195 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms